Gene annotation
Transcriptome id Sobic.009G030400.1,Sobic.009G030400.2
Synonym ATEYA, Sb09g002540, EYA
Functional annotation eyes absent homolog 4, putative, expressed
UniProt A0A1B6P6G2 , A0A097PQR2 , C5YZG4
Pfam -
Panther DB PTHR10190
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004725; protein tyrosine phosphatase activity


Orthologs (automatic annotation)
TAIR AT2G35320 : EYES ABSENT homolog
RAP-DB (Rice) LOC_Os06g02028.1 : eyes absent homolog 4, putative, expressed
MaizeGDB (Corn) Zm00025a055290 , Zm00025a040693
Brachypodium KQK19999
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.009G030400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G030100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-isopropylmalate synthase B, putative, expressed K01649: leuA, 2-isopropylmalate synthase
2 Sobic.009G002000 ankyrin repeat family protein, putative, expressed -
3 Sobic.001G067000 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
4 Sobic.003G161800 exportin 1, putative, expressed K14289: exportin-5
5 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
6 Sobic.002G390400 expressed protein -
7 Sobic.010G141600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K00122: formate dehydrogenase
8 Sobic.006G061100 CBS domain containing membrane protein, putative, expressed -
9 Sobic.009G055600 TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
10 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
11 Sobic.009G132600 methyl-binding domain protein MBD, putative, expressed -
12 Sobic.010G256200 expressed protein -
13 Sobic.005G084900 OsDegp12 - Putative Deg protease homologue, expressed -
14 Sobic.002G252900 DNA repair ATPase-related, putative, expressed -
15 Sobic.003G026900 expressed protein -
16 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase
17 Sobic.001G123201 - -
18 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
19 Sobic.003G192000 3-5 exonuclease/ nucleic acid binding protein, putative, expressed K18740: EXD1, exonuclease 3'-5' domain-containing protein 1
20 Sobic.001G157600 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4


Gene co-expression network
sample Sobic009G030400 Sobic009G030400 Sobic005G030100 Sobic005G030100 Sobic009G030400--Sobic005G030100 Sobic009G002000 Sobic009G002000 Sobic009G030400--Sobic009G002000 Sobic001G067000 Sobic001G067000 Sobic009G030400--Sobic001G067000 Sobic003G161800 Sobic003G161800 Sobic009G030400--Sobic003G161800 Sobic008G160500 Sobic008G160500 Sobic009G030400--Sobic008G160500 Sobic002G390400 Sobic002G390400 Sobic009G030400--Sobic002G390400 Sobic010G141600 Sobic010G141600 Sobic009G030400--Sobic010G141600 Sobic006G061100 Sobic006G061100 Sobic009G030400--Sobic006G061100 Sobic009G055600 Sobic009G055600 Sobic009G030400--Sobic009G055600 Sobic005G030100--Sobic009G030400 Sobic005G030100--Sobic002G390400 Sobic010G207400 Sobic010G207400 Sobic005G030100--Sobic010G207400 Sobic007G150700 Sobic007G150700 Sobic005G030100--Sobic007G150700 Sobic005G030100--Sobic003G161800 Sobic008G052200 Sobic008G052200 Sobic005G030100--Sobic008G052200 Sobic005G030100--Sobic006G061100 Sobic001G423300 Sobic001G423300 Sobic005G030100--Sobic001G423300 Sobic005G030100--Sobic008G160500 Sobic002G277200 Sobic002G277200 Sobic009G002000--Sobic002G277200 Sobic009G002000--Sobic009G030400 Sobic009G201800 Sobic009G201800 Sobic009G002000--Sobic009G201800 Sobic001G115500 Sobic001G115500 Sobic009G002000--Sobic001G115500 Sobic008G118500 Sobic008G118500 Sobic009G002000--Sobic008G118500 Sobic005G084900 Sobic005G084900 Sobic009G002000--Sobic005G084900 Sobic009G102900 Sobic009G102900 Sobic009G002000--Sobic009G102900 Sobic001G157600 Sobic001G157600 Sobic009G002000--Sobic001G157600 Sobic009G258500 Sobic009G258500 Sobic009G002000--Sobic009G258500 Sobic003G026900 Sobic003G026900 Sobic001G067000--Sobic003G026900 Sobic006G143300 Sobic006G143300 Sobic001G067000--Sobic006G143300 Sobic002G420800 Sobic002G420800 Sobic001G067000--Sobic002G420800 Sobic002G230400 Sobic002G230400 Sobic001G067000--Sobic002G230400 Sobic007G076500 Sobic007G076500 Sobic001G067000--Sobic007G076500 Sobic002G147466 Sobic002G147466 Sobic001G067000--Sobic002G147466 Sobic004G196800 Sobic004G196800 Sobic001G067000--Sobic004G196800 Sobic007G199500 Sobic007G199500 Sobic001G067000--Sobic007G199500 Sobic010G193700 Sobic010G193700 Sobic001G067000--Sobic010G193700 Sobic002G254800 Sobic002G254800 Sobic003G161800--Sobic002G254800 Sobic001G373000 Sobic001G373000 Sobic003G161800--Sobic001G373000 Sobic003G161800--Sobic009G030400 Sobic006G179400 Sobic006G179400 Sobic003G161800--Sobic006G179400 Sobic003G180100 Sobic003G180100 Sobic003G161800--Sobic003G180100 Sobic010G236200 Sobic010G236200 Sobic003G161800--Sobic010G236200 Sobic003G161800--Sobic005G030100 Sobic009G113100 Sobic009G113100 Sobic003G161800--Sobic009G113100 Sobic003G161800--Sobic001G115500 Sobic003G062400 Sobic003G062400 Sobic008G160500--Sobic003G062400 Sobic001G005600 Sobic001G005600 Sobic008G160500--Sobic001G005600 Sobic008G160500--Sobic009G030400 Sobic006G120800 Sobic006G120800 Sobic008G160500--Sobic006G120800 Sobic002G359900 Sobic002G359900 Sobic008G160500--Sobic002G359900 Sobic002G403200 Sobic002G403200 Sobic008G160500--Sobic002G403200 Sobic003G004500 Sobic003G004500 Sobic008G160500--Sobic003G004500 Sobic009G258400 Sobic009G258400 Sobic008G160500--Sobic009G258400 Sobic001G033400 Sobic001G033400 Sobic008G160500--Sobic001G033400 Sobic001G135500 Sobic001G135500 Sobic002G390400--Sobic001G135500 Sobic003G415100 Sobic003G415100 Sobic002G390400--Sobic003G415100 Sobic009G069200 Sobic009G069200 Sobic002G390400--Sobic009G069200 Sobic005G198200 Sobic005G198200 Sobic002G390400--Sobic005G198200 Sobic002G390400--Sobic005G030100 Sobic002G390400--Sobic009G030400 Sobic002G390400--Sobic009G113100 Sobic008G156200 Sobic008G156200 Sobic002G390400--Sobic008G156200 Sobic001G429200 Sobic001G429200 Sobic002G390400--Sobic001G429200 Sobic010G141600--Sobic009G030400 Sobic002G208400 Sobic002G208400 Sobic010G141600--Sobic002G208400 Sobic010G141600--Sobic009G002000 Sobic006G193500 Sobic006G193500 Sobic010G141600--Sobic006G193500 Sobic010G141600--Sobic001G373000 Sobic010G141600--Sobic001G115500 Sobic001G013300 Sobic001G013300 Sobic010G141600--Sobic001G013300 Sobic010G141600--Sobic009G113100 Sobic002G263200 Sobic002G263200 Sobic010G141600--Sobic002G263200 Sobic004G075700 Sobic004G075700 Sobic006G061100--Sobic004G075700 Sobic006G061100--Sobic003G026900 Sobic009G060300 Sobic009G060300 Sobic006G061100--Sobic009G060300 Sobic006G061100--Sobic010G207400 Sobic006G015500 Sobic006G015500 Sobic006G061100--Sobic006G015500 Sobic004G154300 Sobic004G154300 Sobic006G061100--Sobic004G154300 Sobic006G061100--Sobic009G113100 Sobic004G311400 Sobic004G311400 Sobic006G061100--Sobic004G311400 Sobic009G132650 Sobic009G132650 Sobic006G061100--Sobic009G132650 Sobic001G196700 Sobic001G196700 Sobic009G055600--Sobic001G196700 Sobic009G055600--Sobic009G030400 Sobic009G132600 Sobic009G132600 Sobic009G055600--Sobic009G132600 Sobic009G055600--Sobic008G160500 Sobic009G237700 Sobic009G237700 Sobic009G055600--Sobic009G237700 Sobic009G055600--Sobic002G403200 Sobic009G055600--Sobic010G207400 Sobic006G139000 Sobic006G139000 Sobic009G055600--Sobic006G139000 Sobic010G168500 Sobic010G168500 Sobic009G055600--Sobic010G168500
Octagon: transcription factors


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