Gene annotation
Transcriptome id Sobic.003G161800.1
Synonym Sb03g014460, HST, HST1
Functional annotation exportin 1, putative, expressed
UniProt C5XKI4
Pfam PF08389
Panther DB PTHR11223 PTHR11223:SF3
NCBI CDD -
KEGG Orthology K14289; exportin-5
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05040 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os01g26160.1 : exportin 1, putative, expressed
MaizeGDB (Corn) Zm00025a036273
Brachypodium KQK04284 , KQK04285 , PNT70482 , KQK04283
Barley HORVU3Hr1G047040.46 , HORVU3Hr1G047040.49 , HORVU3Hr1G047040.48 , HORVU3Hr1G047040.41 , HORVU3Hr1G047040.40 , HORVU3Hr1G047040.43 , HORVU3Hr1G047040.42 , HORVU3Hr1G047040.45 , HORVU3Hr1G047040.44 , HORVU3Hr1G047040.47 , HORVU3Hr1G047040.35 , HORVU3Hr1G047040.29 , HORVU3Hr1G047040.28 , HORVU3Hr1G047040.23 , HORVU3Hr1G047040.22 , HORVU3Hr1G047040.21 , HORVU3Hr1G047040.20 , HORVU3Hr1G047040.27 , HORVU3Hr1G047040.26 , HORVU3Hr1G047040.25 , HORVU3Hr1G047040.24 , HORVU3Hr1G047040.56 , HORVU3Hr1G047040.57 , HORVU3Hr1G047040.54 , HORVU3Hr1G047040.55 , HORVU3Hr1G047040.52 , HORVU3Hr1G047040.53 , HORVU3Hr1G047040.50 , HORVU3Hr1G047040.51 , HORVU3Hr1G047040.38 , HORVU3Hr1G047040.39 , HORVU3Hr1G047040.30 , HORVU3Hr1G047040.31 , HORVU3Hr1G047040.32 , HORVU3Hr1G047040.33 , HORVU3Hr1G047040.34 , HORVU3Hr1G047040.36 , HORVU3Hr1G047040.37 , HORVU3Hr1G047040.14 , HORVU3Hr1G047040.8 , HORVU3Hr1G047040.9 , HORVU3Hr1G047040.1 , HORVU3Hr1G047040.2 , HORVU3Hr1G047040.3 , HORVU3Hr1G047040.4 , HORVU3Hr1G047040.5 , HORVU3Hr1G047040.6 , HORVU3Hr1G047040.7 , HORVU3Hr1G047040.12 , HORVU3Hr1G047040.13 , HORVU3Hr1G047040.10 , HORVU3Hr1G047040.11 , HORVU3Hr1G047040.16 , HORVU3Hr1G047040.15 , HORVU3Hr1G047040.18 , HORVU3Hr1G047040.19 , HORVU3Hr1G047040.17
Wheat TraesCS3A02G199400 , TraesCS3A02G199400 , TraesCS3A02G199400 , TraesCS3A02G199400 , TraesCS3A02G199400 , TraesCS3A02G199400 , TraesCS3A02G199400 , TraesCS3A02G199400 , TraesCS3B02G229100 , TraesCS3B02G229100 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3A02G199400 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3D02G205700 , TraesCS3A02G199400 , TraesCS3A02G199400 , TraesCS3A02G199400 , TraesCS3A02G199400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G254800 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
2 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
3 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
4 Sobic.006G179400 niemann-Pick C1 protein precursor, putative, expressed K12385: Niemann-Pick C1 protein
5 Sobic.003G180100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
6 Sobic.010G236200 RecF/RecN/SMC N terminal domain containing protein, expressed -
7 Sobic.005G030100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-isopropylmalate synthase B, putative, expressed K01649: leuA, 2-isopropylmalate synthase
8 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
9 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
10 Sobic.005G187400 A49-like RNA polymerase I associated factor family protein, expressed K03005: RPA49, DNA-directed RNA polymerase I subunit RPA49
11 Sobic.006G061100 CBS domain containing membrane protein, putative, expressed -
12 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
13 Sobic.006G015500 ZOS9-03 - C2H2 zinc finger protein, expressed -
14 Sobic.001G222000 WD domain, G-beta repeat domain containing protein, expressed -
15 Sobic.008G164700 - -
16 Sobic.009G104900 - K03348: anaphase-promoting complex subunit 1
17 Sobic.002G390400 expressed protein -
18 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
19 Sobic.002G132600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K14314: NUP210, nuclear pore complex protein Nup210
20 Sobic.001G135500 HECT-domain domain containing protein, expressed K10588: ubiquitin-protein ligase E3 B


Gene co-expression network
sample Sobic003G161800 Sobic003G161800 Sobic002G254800 Sobic002G254800 Sobic003G161800--Sobic002G254800 Sobic001G373000 Sobic001G373000 Sobic003G161800--Sobic001G373000 Sobic009G030400 Sobic009G030400 Sobic003G161800--Sobic009G030400 Sobic006G179400 Sobic006G179400 Sobic003G161800--Sobic006G179400 Sobic003G180100 Sobic003G180100 Sobic003G161800--Sobic003G180100 Sobic010G236200 Sobic010G236200 Sobic003G161800--Sobic010G236200 Sobic005G030100 Sobic005G030100 Sobic003G161800--Sobic005G030100 Sobic009G113100 Sobic009G113100 Sobic003G161800--Sobic009G113100 Sobic001G115500 Sobic001G115500 Sobic003G161800--Sobic001G115500 Sobic002G254800--Sobic003G161800 Sobic002G132600 Sobic002G132600 Sobic002G254800--Sobic002G132600 Sobic002G254800--Sobic001G373000 Sobic002G254800--Sobic010G236200 Sobic003G259600 Sobic003G259600 Sobic002G254800--Sobic003G259600 Sobic001G373800 Sobic001G373800 Sobic002G254800--Sobic001G373800 Sobic006G033101 Sobic006G033101 Sobic002G254800--Sobic006G033101 Sobic004G038100 Sobic004G038100 Sobic002G254800--Sobic004G038100 Sobic009G032200 Sobic009G032200 Sobic002G254800--Sobic009G032200 Sobic009G104900 Sobic009G104900 Sobic001G373000--Sobic009G104900 Sobic001G373000--Sobic004G038100 Sobic002G005000 Sobic002G005000 Sobic001G373000--Sobic002G005000 Sobic001G373000--Sobic003G259600 Sobic003G361400 Sobic003G361400 Sobic001G373000--Sobic003G361400 Sobic010G188000 Sobic010G188000 Sobic001G373000--Sobic010G188000 Sobic002G126800 Sobic002G126800 Sobic001G373000--Sobic002G126800 Sobic001G013300 Sobic001G013300 Sobic001G373000--Sobic001G013300 Sobic005G028100 Sobic005G028100 Sobic001G373000--Sobic005G028100 Sobic009G030400--Sobic005G030100 Sobic009G002000 Sobic009G002000 Sobic009G030400--Sobic009G002000 Sobic001G067000 Sobic001G067000 Sobic009G030400--Sobic001G067000 Sobic009G030400--Sobic003G161800 Sobic008G160500 Sobic008G160500 Sobic009G030400--Sobic008G160500 Sobic002G390400 Sobic002G390400 Sobic009G030400--Sobic002G390400 Sobic010G141600 Sobic010G141600 Sobic009G030400--Sobic010G141600 Sobic006G061100 Sobic006G061100 Sobic009G030400--Sobic006G061100 Sobic009G055600 Sobic009G055600 Sobic009G030400--Sobic009G055600 Sobic006G179400--Sobic003G161800 Sobic006G015500 Sobic006G015500 Sobic006G179400--Sobic006G015500 Sobic009G069000 Sobic009G069000 Sobic006G179400--Sobic009G069000 Sobic006G179400--Sobic006G061100 Sobic004G075700 Sobic004G075700 Sobic006G179400--Sobic004G075700 Sobic006G179400--Sobic009G030400 Sobic006G179400--Sobic003G180100 Sobic001G373700 Sobic001G373700 Sobic006G179400--Sobic001G373700 Sobic006G022200 Sobic006G022200 Sobic006G179400--Sobic006G022200 Sobic009G148000 Sobic009G148000 Sobic003G180100--Sobic009G148000 Sobic002G343000 Sobic002G343000 Sobic003G180100--Sobic002G343000 Sobic001G429200 Sobic001G429200 Sobic003G180100--Sobic001G429200 Sobic003G180100--Sobic003G161800 Sobic001G541400 Sobic001G541400 Sobic003G180100--Sobic001G541400 Sobic005G074400 Sobic005G074400 Sobic003G180100--Sobic005G074400 Sobic006G200901 Sobic006G200901 Sobic003G180100--Sobic006G200901 Sobic003G180100--Sobic002G390400 Sobic004G242200 Sobic004G242200 Sobic003G180100--Sobic004G242200 Sobic010G236200--Sobic009G032200 Sobic010G269300 Sobic010G269300 Sobic010G236200--Sobic010G269300 Sobic010G149600 Sobic010G149600 Sobic010G236200--Sobic010G149600 Sobic004G043750 Sobic004G043750 Sobic010G236200--Sobic004G043750 Sobic003G221500 Sobic003G221500 Sobic010G236200--Sobic003G221500 Sobic004G111000 Sobic004G111000 Sobic010G236200--Sobic004G111000 Sobic010G236200--Sobic002G254800 Sobic009G257500 Sobic009G257500 Sobic010G236200--Sobic009G257500 Sobic007G125700 Sobic007G125700 Sobic010G236200--Sobic007G125700 Sobic005G030100--Sobic009G030400 Sobic005G030100--Sobic002G390400 Sobic010G207400 Sobic010G207400 Sobic005G030100--Sobic010G207400 Sobic007G150700 Sobic007G150700 Sobic005G030100--Sobic007G150700 Sobic005G030100--Sobic003G161800 Sobic008G052200 Sobic008G052200 Sobic005G030100--Sobic008G052200 Sobic005G030100--Sobic006G061100 Sobic001G423300 Sobic001G423300 Sobic005G030100--Sobic001G423300 Sobic005G030100--Sobic008G160500 Sobic009G069200 Sobic009G069200 Sobic009G113100--Sobic009G069200 Sobic001G090300 Sobic001G090300 Sobic009G113100--Sobic001G090300 Sobic005G198200 Sobic005G198200 Sobic009G113100--Sobic005G198200 Sobic001G004100 Sobic001G004100 Sobic009G113100--Sobic001G004100 Sobic002G208400 Sobic002G208400 Sobic009G113100--Sobic002G208400 Sobic007G187600 Sobic007G187600 Sobic009G113100--Sobic007G187600 Sobic003G214700 Sobic003G214700 Sobic009G113100--Sobic003G214700 Sobic009G113100--Sobic001G013300 Sobic009G113100--Sobic006G061100 Sobic008G125000 Sobic008G125000 Sobic001G115500--Sobic008G125000 Sobic001G008500 Sobic001G008500 Sobic001G115500--Sobic001G008500 Sobic003G008600 Sobic003G008600 Sobic001G115500--Sobic003G008600 Sobic004G249300 Sobic004G249300 Sobic001G115500--Sobic004G249300 Sobic009G102900 Sobic009G102900 Sobic001G115500--Sobic009G102900 Sobic001G115500--Sobic002G208400 Sobic002G264300 Sobic002G264300 Sobic001G115500--Sobic002G264300 Sobic001G436300 Sobic001G436300 Sobic001G115500--Sobic001G436300 Sobic001G115500--Sobic001G373000
Octagon: transcription factors


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