Gene annotation
Transcriptome id Sobic.008G164700.1
Synonym
Functional annotation -
UniProt C5YRJ6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
2 Sobic.006G015500 ZOS9-03 - C2H2 zinc finger protein, expressed -
3 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
4 Sobic.002G254800 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
5 Sobic.001G222000 WD domain, G-beta repeat domain containing protein, expressed -
6 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
7 Sobic.001G542450 - -
8 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
9 Sobic.001G090300 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
10 Sobic.003G161800 exportin 1, putative, expressed K14289: exportin-5
11 Sobic.003G052800 RST1, putative, expressed -
12 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
13 Sobic.006G061100 CBS domain containing membrane protein, putative, expressed -
14 Sobic.010G235800 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
15 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
16 Sobic.002G372500 exportin 1, putative, expressed K14288: exportin-T
17 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
18 Sobic.003G217200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
19 Sobic.002G148400 histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed -
20 Sobic.002G336200 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3


Gene co-expression network
sample Sobic008G164700 Sobic008G164700 Sobic008G057000 Sobic008G057000 Sobic008G164700--Sobic008G057000 Sobic006G015500 Sobic006G015500 Sobic008G164700--Sobic006G015500 Sobic009G113100 Sobic009G113100 Sobic008G164700--Sobic009G113100 Sobic002G254800 Sobic002G254800 Sobic008G164700--Sobic002G254800 Sobic001G222000 Sobic001G222000 Sobic008G164700--Sobic001G222000 Sobic003G409200 Sobic003G409200 Sobic008G164700--Sobic003G409200 Sobic001G542450 Sobic001G542450 Sobic008G164700--Sobic001G542450 Sobic003G361400 Sobic003G361400 Sobic008G164700--Sobic003G361400 Sobic001G090300 Sobic001G090300 Sobic008G164700--Sobic001G090300 Sobic008G057000--Sobic003G409200 Sobic005G200800 Sobic005G200800 Sobic008G057000--Sobic005G200800 Sobic001G346900 Sobic001G346900 Sobic008G057000--Sobic001G346900 Sobic004G086200 Sobic004G086200 Sobic008G057000--Sobic004G086200 Sobic002G148400 Sobic002G148400 Sobic008G057000--Sobic002G148400 Sobic010G279900 Sobic010G279900 Sobic008G057000--Sobic010G279900 Sobic001G484200 Sobic001G484200 Sobic008G057000--Sobic001G484200 Sobic009G032200 Sobic009G032200 Sobic008G057000--Sobic009G032200 Sobic007G183300 Sobic007G183300 Sobic008G057000--Sobic007G183300 Sobic006G061100 Sobic006G061100 Sobic006G015500--Sobic006G061100 Sobic004G075700 Sobic004G075700 Sobic006G015500--Sobic004G075700 Sobic006G015500--Sobic008G164700 Sobic006G179400 Sobic006G179400 Sobic006G015500--Sobic006G179400 Sobic001G278700 Sobic001G278700 Sobic006G015500--Sobic001G278700 Sobic009G132600 Sobic009G132600 Sobic006G015500--Sobic009G132600 Sobic009G060300 Sobic009G060300 Sobic006G015500--Sobic009G060300 Sobic006G015500--Sobic009G113100 Sobic006G257600 Sobic006G257600 Sobic006G015500--Sobic006G257600 Sobic009G069200 Sobic009G069200 Sobic009G113100--Sobic009G069200 Sobic009G113100--Sobic001G090300 Sobic005G198200 Sobic005G198200 Sobic009G113100--Sobic005G198200 Sobic001G004100 Sobic001G004100 Sobic009G113100--Sobic001G004100 Sobic002G208400 Sobic002G208400 Sobic009G113100--Sobic002G208400 Sobic007G187600 Sobic007G187600 Sobic009G113100--Sobic007G187600 Sobic003G214700 Sobic003G214700 Sobic009G113100--Sobic003G214700 Sobic001G013300 Sobic001G013300 Sobic009G113100--Sobic001G013300 Sobic009G113100--Sobic006G061100 Sobic003G161800 Sobic003G161800 Sobic002G254800--Sobic003G161800 Sobic002G132600 Sobic002G132600 Sobic002G254800--Sobic002G132600 Sobic001G373000 Sobic001G373000 Sobic002G254800--Sobic001G373000 Sobic010G236200 Sobic010G236200 Sobic002G254800--Sobic010G236200 Sobic003G259600 Sobic003G259600 Sobic002G254800--Sobic003G259600 Sobic001G373800 Sobic001G373800 Sobic002G254800--Sobic001G373800 Sobic006G033101 Sobic006G033101 Sobic002G254800--Sobic006G033101 Sobic004G038100 Sobic004G038100 Sobic002G254800--Sobic004G038100 Sobic002G254800--Sobic009G032200 Sobic001G222000--Sobic001G373000 Sobic001G135500 Sobic001G135500 Sobic001G222000--Sobic001G135500 Sobic001G023800 Sobic001G023800 Sobic001G222000--Sobic001G023800 Sobic001G393700 Sobic001G393700 Sobic001G222000--Sobic001G393700 Sobic007G168300 Sobic007G168300 Sobic001G222000--Sobic007G168300 Sobic001G222000--Sobic008G057000 Sobic003G074200 Sobic003G074200 Sobic001G222000--Sobic003G074200 Sobic001G355200 Sobic001G355200 Sobic001G222000--Sobic001G355200 Sobic001G222000--Sobic009G032200 Sobic003G409200--Sobic001G346900 Sobic010G215900 Sobic010G215900 Sobic003G409200--Sobic010G215900 Sobic004G111000 Sobic004G111000 Sobic003G409200--Sobic004G111000 Sobic003G409200--Sobic008G057000 Sobic003G427100 Sobic003G427100 Sobic003G409200--Sobic003G427100 Sobic001G501800 Sobic001G501800 Sobic003G409200--Sobic001G501800 Sobic004G285000 Sobic004G285000 Sobic003G409200--Sobic004G285000 Sobic003G409200--Sobic010G279900 Sobic002G145800 Sobic002G145800 Sobic003G409200--Sobic002G145800 Sobic008G002300 Sobic008G002300 Sobic001G542450--Sobic008G002300 Sobic003G416700 Sobic003G416700 Sobic001G542450--Sobic003G416700 Sobic001G542450--Sobic002G145800 Sobic003G217200 Sobic003G217200 Sobic001G542450--Sobic003G217200 Sobic003G062300 Sobic003G062300 Sobic001G542450--Sobic003G062300 Sobic006G224800 Sobic006G224800 Sobic001G542450--Sobic006G224800 Sobic002G295500 Sobic002G295500 Sobic001G542450--Sobic002G295500 Sobic001G461400 Sobic001G461400 Sobic001G542450--Sobic001G461400 Sobic006G166200 Sobic006G166200 Sobic001G542450--Sobic006G166200 Sobic003G361400--Sobic003G259600 Sobic003G361400--Sobic001G373000 Sobic002G219900 Sobic002G219900 Sobic003G361400--Sobic002G219900 Sobic003G361400--Sobic004G038100 Sobic003G361400--Sobic001G013300 Sobic002G043000 Sobic002G043000 Sobic003G361400--Sobic002G043000 Sobic001G033900 Sobic001G033900 Sobic003G361400--Sobic001G033900 Sobic002G372500 Sobic002G372500 Sobic003G361400--Sobic002G372500 Sobic003G360300 Sobic003G360300 Sobic003G361400--Sobic003G360300 Sobic005G199200 Sobic005G199200 Sobic001G090300--Sobic005G199200 Sobic001G090300--Sobic009G113100 Sobic005G040900 Sobic005G040900 Sobic001G090300--Sobic005G040900 Sobic003G415100 Sobic003G415100 Sobic001G090300--Sobic003G415100 Sobic009G074700 Sobic009G074700 Sobic001G090300--Sobic009G074700 Sobic001G090300--Sobic007G187600 Sobic009G129600 Sobic009G129600 Sobic001G090300--Sobic009G129600 Sobic009G000400 Sobic009G000400 Sobic001G090300--Sobic009G000400 Sobic001G334100 Sobic001G334100 Sobic001G090300--Sobic001G334100
Octagon: transcription factors


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