Gene annotation
Transcriptome id Sobic.006G015500.2,Sobic.006G015500.1
Synonym EMF2, VEF2, CYR1, AtEMF2
Functional annotation ZOS9-03 - C2H2 zinc finger protein, expressed
UniProt A0A1Z5RCH2 , A0A1B6PJF5
Pfam PF09733
Panther DB PTHR22597 PTHR22597:SF0
NCBI CDD KOG2350; Zn-finger protein joined to JAZF1 (predicted suppressor)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51230 : VEFS-Box of polycomb protein
RAP-DB (Rice) LOC_Os09g13630.1 : ZOS9-03 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G061100 CBS domain containing membrane protein, putative, expressed -
2 Sobic.004G075700 PHD-finger domain containing protein, putative, expressed -
3 Sobic.008G164700 - -
4 Sobic.006G179400 niemann-Pick C1 protein precursor, putative, expressed K12385: Niemann-Pick C1 protein
5 Sobic.001G278700 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
6 Sobic.009G132600 methyl-binding domain protein MBD, putative, expressed -
7 Sobic.009G060300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
8 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
9 Sobic.006G257600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
10 Sobic.003G161800 exportin 1, putative, expressed K14289: exportin-5
11 Sobic.003G026900 expressed protein -
12 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
13 Sobic.001G135500 HECT-domain domain containing protein, expressed K10588: ubiquitin-protein ligase E3 B
14 Sobic.002G245000 HECT-domain domain containing protein, expressed K10591: NEDD4, E3 ubiquitin-protein ligase NEDD4
15 Sobic.002G029100 GYF domain containing protein, putative, expressed -
16 Sobic.004G311400 PHD-finger domain containing protein, putative, expressed -
17 Sobic.002G390400 expressed protein -
18 Sobic.009G132650 - -
19 Sobic.007G018700 kinesin motor domain containing protein, putative, expressed -
20 Sobic.004G154300 ThiF family domain containing protein, putative, expressed K12164: UBA5, ubiquitin-like modifier-activating enzyme 5


Gene co-expression network
sample Sobic006G015500 Sobic006G015500 Sobic006G061100 Sobic006G061100 Sobic006G015500--Sobic006G061100 Sobic004G075700 Sobic004G075700 Sobic006G015500--Sobic004G075700 Sobic008G164700 Sobic008G164700 Sobic006G015500--Sobic008G164700 Sobic006G179400 Sobic006G179400 Sobic006G015500--Sobic006G179400 Sobic001G278700 Sobic001G278700 Sobic006G015500--Sobic001G278700 Sobic009G132600 Sobic009G132600 Sobic006G015500--Sobic009G132600 Sobic009G060300 Sobic009G060300 Sobic006G015500--Sobic009G060300 Sobic009G113100 Sobic009G113100 Sobic006G015500--Sobic009G113100 Sobic006G257600 Sobic006G257600 Sobic006G015500--Sobic006G257600 Sobic006G061100--Sobic004G075700 Sobic003G026900 Sobic003G026900 Sobic006G061100--Sobic003G026900 Sobic006G061100--Sobic009G060300 Sobic010G207400 Sobic010G207400 Sobic006G061100--Sobic010G207400 Sobic006G061100--Sobic006G015500 Sobic004G154300 Sobic004G154300 Sobic006G061100--Sobic004G154300 Sobic006G061100--Sobic009G113100 Sobic004G311400 Sobic004G311400 Sobic006G061100--Sobic004G311400 Sobic009G132650 Sobic009G132650 Sobic006G061100--Sobic009G132650 Sobic006G186300 Sobic006G186300 Sobic004G075700--Sobic006G186300 Sobic004G075700--Sobic010G207400 Sobic006G015800 Sobic006G015800 Sobic004G075700--Sobic006G015800 Sobic001G305100 Sobic001G305100 Sobic004G075700--Sobic001G305100 Sobic004G075700--Sobic001G278700 Sobic004G075700--Sobic003G026900 Sobic004G075700--Sobic006G061100 Sobic006G161300 Sobic006G161300 Sobic004G075700--Sobic006G161300 Sobic005G131800 Sobic005G131800 Sobic004G075700--Sobic005G131800 Sobic008G057000 Sobic008G057000 Sobic008G164700--Sobic008G057000 Sobic008G164700--Sobic006G015500 Sobic008G164700--Sobic009G113100 Sobic002G254800 Sobic002G254800 Sobic008G164700--Sobic002G254800 Sobic001G222000 Sobic001G222000 Sobic008G164700--Sobic001G222000 Sobic003G409200 Sobic003G409200 Sobic008G164700--Sobic003G409200 Sobic001G542450 Sobic001G542450 Sobic008G164700--Sobic001G542450 Sobic003G361400 Sobic003G361400 Sobic008G164700--Sobic003G361400 Sobic001G090300 Sobic001G090300 Sobic008G164700--Sobic001G090300 Sobic003G161800 Sobic003G161800 Sobic006G179400--Sobic003G161800 Sobic006G179400--Sobic006G015500 Sobic009G069000 Sobic009G069000 Sobic006G179400--Sobic009G069000 Sobic006G179400--Sobic006G061100 Sobic006G179400--Sobic004G075700 Sobic009G030400 Sobic009G030400 Sobic006G179400--Sobic009G030400 Sobic003G180100 Sobic003G180100 Sobic006G179400--Sobic003G180100 Sobic001G373700 Sobic001G373700 Sobic006G179400--Sobic001G373700 Sobic006G022200 Sobic006G022200 Sobic006G179400--Sobic006G022200 Sobic001G278700--Sobic004G075700 Sobic001G278700--Sobic006G015800 Sobic010G273800 Sobic010G273800 Sobic001G278700--Sobic010G273800 Sobic002G354800 Sobic002G354800 Sobic001G278700--Sobic002G354800 Sobic007G150700 Sobic007G150700 Sobic001G278700--Sobic007G150700 Sobic002G230400 Sobic002G230400 Sobic001G278700--Sobic002G230400 Sobic003G055200 Sobic003G055200 Sobic001G278700--Sobic003G055200 Sobic004G163700 Sobic004G163700 Sobic001G278700--Sobic004G163700 Sobic001G278700--Sobic006G161300 Sobic009G132600--Sobic010G207400 Sobic007G091200 Sobic007G091200 Sobic009G132600--Sobic007G091200 Sobic009G253800 Sobic009G253800 Sobic009G132600--Sobic009G253800 Sobic009G132600--Sobic001G278700 Sobic009G132600--Sobic010G273800 Sobic001G196700 Sobic001G196700 Sobic009G132600--Sobic001G196700 Sobic009G033500 Sobic009G033500 Sobic009G132600--Sobic009G033500 Sobic003G207600 Sobic003G207600 Sobic009G132600--Sobic003G207600 Sobic009G007500 Sobic009G007500 Sobic009G132600--Sobic009G007500 Sobic009G060300--Sobic009G132650 Sobic004G071100 Sobic004G071100 Sobic009G060300--Sobic004G071100 Sobic005G033400 Sobic005G033400 Sobic009G060300--Sobic005G033400 Sobic004G029800 Sobic004G029800 Sobic009G060300--Sobic004G029800 Sobic002G286800 Sobic002G286800 Sobic009G060300--Sobic002G286800 Sobic006G081400 Sobic006G081400 Sobic009G060300--Sobic006G081400 Sobic005G185400 Sobic005G185400 Sobic009G060300--Sobic005G185400 Sobic005G184500 Sobic005G184500 Sobic009G060300--Sobic005G184500 Sobic005G188800 Sobic005G188800 Sobic009G060300--Sobic005G188800 Sobic009G069200 Sobic009G069200 Sobic009G113100--Sobic009G069200 Sobic009G113100--Sobic001G090300 Sobic005G198200 Sobic005G198200 Sobic009G113100--Sobic005G198200 Sobic001G004100 Sobic001G004100 Sobic009G113100--Sobic001G004100 Sobic002G208400 Sobic002G208400 Sobic009G113100--Sobic002G208400 Sobic007G187600 Sobic007G187600 Sobic009G113100--Sobic007G187600 Sobic003G214700 Sobic003G214700 Sobic009G113100--Sobic003G214700 Sobic001G013300 Sobic001G013300 Sobic009G113100--Sobic001G013300 Sobic009G113100--Sobic006G061100 Sobic006G257600--Sobic009G113100 Sobic006G257600--Sobic003G055200 Sobic002G315100 Sobic002G315100 Sobic006G257600--Sobic002G315100 Sobic006G257600--Sobic002G354800 Sobic010G223500 Sobic010G223500 Sobic006G257600--Sobic010G223500 Sobic006G257600--Sobic009G069200 Sobic002G306600 Sobic002G306600 Sobic006G257600--Sobic002G306600 Sobic006G257600--Sobic006G015500 Sobic003G284700 Sobic003G284700 Sobic006G257600--Sobic003G284700
Octagon: transcription factors


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