Gene annotation
Transcriptome id Sobic.004G154300.1
Synonym Sb04g020560
Functional annotation ThiF family domain containing protein, putative, expressed
UniProt A0A194YQ00
Pfam PF00899
Panther DB PTHR10953 PTHR10953:SF9
NCBI CDD -
KEGG Orthology K12164; UBA5, ubiquitin-like modifier-activating enzyme 5
Gene Ontology GO:0008641; ubiquitin-like modifier activating enzyme activity


Orthologs (automatic annotation)
TAIR AT1G05350 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os02g30310.1 : ThiF family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a020395
Brachypodium KQJ99576
Barley -
Wheat TraesCS7D02G101500 , TraesCS7A02G107100 , TraesCS7B02G005700 , TraesCS7B02G005700 , TraesCS7B02G005700
Populus -


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cDNA sequences
Sobic.004G154300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G061100 CBS domain containing membrane protein, putative, expressed -
2 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase
3 Sobic.003G150900 protein transport protein-related, putative, expressed -
4 Sobic.006G141600 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
5 Sobic.001G168900 bacterial transferase hexapeptide domain containing protein, expressed K03241: translation initiation factor eIF-2B subunit gamma
6 Sobic.002G292900 protein binding protein, putative, expressed -
7 Sobic.001G458200 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
8 Sobic.002G029100 GYF domain containing protein, putative, expressed -
9 Sobic.006G245100 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
10 Sobic.001G487100 RNA recognition motif containing protein, putative, expressed -
11 Sobic.004G311400 PHD-finger domain containing protein, putative, expressed -
12 Sobic.003G051700 universal stress protein domain containing protein, putative, expressed -
13 Sobic.010G071600 PTF1, putative, expressed -
14 Sobic.009G164000 tentative name(PubMedID : 31536532)@cysteinyl-tRNA synthetase, putative, expressed K01883: CARS, cysteinyl-tRNA synthetase
15 Sobic.006G139100 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
16 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -
17 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
18 Sobic.010G266500 BRE, putative, expressed K12173: BRE, BRCA1-A complex subunit BRE
19 Sobic.006G015500 ZOS9-03 - C2H2 zinc finger protein, expressed -
20 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2


Gene co-expression network
sample Sobic004G154300 Sobic004G154300 Sobic006G061100 Sobic006G061100 Sobic004G154300--Sobic006G061100 Sobic004G282100 Sobic004G282100 Sobic004G154300--Sobic004G282100 Sobic003G150900 Sobic003G150900 Sobic004G154300--Sobic003G150900 Sobic006G141600 Sobic006G141600 Sobic004G154300--Sobic006G141600 Sobic001G168900 Sobic001G168900 Sobic004G154300--Sobic001G168900 Sobic002G292900 Sobic002G292900 Sobic004G154300--Sobic002G292900 Sobic001G458200 Sobic001G458200 Sobic004G154300--Sobic001G458200 Sobic002G029100 Sobic002G029100 Sobic004G154300--Sobic002G029100 Sobic006G245100 Sobic006G245100 Sobic004G154300--Sobic006G245100 Sobic004G075700 Sobic004G075700 Sobic006G061100--Sobic004G075700 Sobic003G026900 Sobic003G026900 Sobic006G061100--Sobic003G026900 Sobic009G060300 Sobic009G060300 Sobic006G061100--Sobic009G060300 Sobic010G207400 Sobic010G207400 Sobic006G061100--Sobic010G207400 Sobic006G015500 Sobic006G015500 Sobic006G061100--Sobic006G015500 Sobic006G061100--Sobic004G154300 Sobic009G113100 Sobic009G113100 Sobic006G061100--Sobic009G113100 Sobic004G311400 Sobic004G311400 Sobic006G061100--Sobic004G311400 Sobic009G132650 Sobic009G132650 Sobic006G061100--Sobic009G132650 Sobic006G139100 Sobic006G139100 Sobic004G282100--Sobic006G139100 Sobic003G121600 Sobic003G121600 Sobic004G282100--Sobic003G121600 Sobic007G117800 Sobic007G117800 Sobic004G282100--Sobic007G117800 Sobic004G282100--Sobic004G154300 Sobic003G148900 Sobic003G148900 Sobic004G282100--Sobic003G148900 Sobic008G162000 Sobic008G162000 Sobic004G282100--Sobic008G162000 Sobic004G282100--Sobic001G458200 Sobic006G095200 Sobic006G095200 Sobic004G282100--Sobic006G095200 Sobic004G282100--Sobic003G150900 Sobic005G114800 Sobic005G114800 Sobic003G150900--Sobic005G114800 Sobic009G166600 Sobic009G166600 Sobic003G150900--Sobic009G166600 Sobic001G005600 Sobic001G005600 Sobic003G150900--Sobic001G005600 Sobic003G150900--Sobic006G139100 Sobic001G042200 Sobic001G042200 Sobic003G150900--Sobic001G042200 Sobic007G146600 Sobic007G146600 Sobic003G150900--Sobic007G146600 Sobic008G021000 Sobic008G021000 Sobic003G150900--Sobic008G021000 Sobic010G077500 Sobic010G077500 Sobic003G150900--Sobic010G077500 Sobic009G160600 Sobic009G160600 Sobic003G150900--Sobic009G160600 Sobic005G150600 Sobic005G150600 Sobic006G141600--Sobic005G150600 Sobic006G141600--Sobic002G292900 Sobic006G141600--Sobic004G154300 Sobic004G160700 Sobic004G160700 Sobic006G141600--Sobic004G160700 Sobic004G172500 Sobic004G172500 Sobic006G141600--Sobic004G172500 Sobic010G244900 Sobic010G244900 Sobic006G141600--Sobic010G244900 Sobic003G159500 Sobic003G159500 Sobic006G141600--Sobic003G159500 Sobic006G141600--Sobic009G113100 Sobic006G257600 Sobic006G257600 Sobic006G141600--Sobic006G257600 Sobic007G187600 Sobic007G187600 Sobic001G168900--Sobic007G187600 Sobic004G307500 Sobic004G307500 Sobic001G168900--Sobic004G307500 Sobic002G077900 Sobic002G077900 Sobic001G168900--Sobic002G077900 Sobic001G291800 Sobic001G291800 Sobic001G168900--Sobic001G291800 Sobic009G258400 Sobic009G258400 Sobic001G168900--Sobic009G258400 Sobic001G168900--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic001G168900--Sobic006G049100 Sobic004G346100 Sobic004G346100 Sobic001G168900--Sobic004G346100 Sobic003G132000 Sobic003G132000 Sobic001G168900--Sobic003G132000 Sobic004G320700 Sobic004G320700 Sobic002G292900--Sobic004G320700 Sobic002G292900--Sobic010G244900 Sobic002G292900--Sobic009G166600 Sobic002G313900 Sobic002G313900 Sobic002G292900--Sobic002G313900 Sobic006G032300 Sobic006G032300 Sobic002G292900--Sobic006G032300 Sobic010G086600 Sobic010G086600 Sobic002G292900--Sobic010G086600 Sobic005G034700 Sobic005G034700 Sobic002G292900--Sobic005G034700 Sobic001G237600 Sobic001G237600 Sobic002G292900--Sobic001G237600 Sobic001G340300 Sobic001G340300 Sobic002G292900--Sobic001G340300 Sobic003G192000 Sobic003G192000 Sobic001G458200--Sobic003G192000 Sobic003G128300 Sobic003G128300 Sobic001G458200--Sobic003G128300 Sobic001G532100 Sobic001G532100 Sobic001G458200--Sobic001G532100 Sobic002G359900 Sobic002G359900 Sobic001G458200--Sobic002G359900 Sobic002G093900 Sobic002G093900 Sobic001G458200--Sobic002G093900 Sobic008G134900 Sobic008G134900 Sobic001G458200--Sobic008G134900 Sobic001G458200--Sobic003G148900 Sobic002G306600 Sobic002G306600 Sobic001G458200--Sobic002G306600 Sobic002G044000 Sobic002G044000 Sobic001G458200--Sobic002G044000 Sobic002G029100--Sobic004G311400 Sobic003G214600 Sobic003G214600 Sobic002G029100--Sobic003G214600 Sobic005G200800 Sobic005G200800 Sobic002G029100--Sobic005G200800 Sobic009G255600 Sobic009G255600 Sobic002G029100--Sobic009G255600 Sobic007G183300 Sobic007G183300 Sobic002G029100--Sobic007G183300 Sobic002G245000 Sobic002G245000 Sobic002G029100--Sobic002G245000 Sobic010G186600 Sobic010G186600 Sobic002G029100--Sobic010G186600 Sobic002G164200 Sobic002G164200 Sobic002G029100--Sobic002G164200 Sobic008G002300 Sobic008G002300 Sobic002G029100--Sobic008G002300 Sobic001G534600 Sobic001G534600 Sobic006G245100--Sobic001G534600 Sobic002G119400 Sobic002G119400 Sobic006G245100--Sobic002G119400 Sobic006G245100--Sobic004G154300 Sobic002G105200 Sobic002G105200 Sobic006G245100--Sobic002G105200 Sobic006G245100--Sobic010G186600 Sobic006G087100 Sobic006G087100 Sobic006G245100--Sobic006G087100 Sobic004G091200 Sobic004G091200 Sobic006G245100--Sobic004G091200 Sobic001G039500 Sobic001G039500 Sobic006G245100--Sobic001G039500 Sobic006G245100--Sobic002G029100
Octagon: transcription factors


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