Gene annotation
Transcriptome id Sobic.001G278700.1
Synonym Sb01g027420
Functional annotation Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed
UniProt C5WQI3
Pfam PF05770
Panther DB PTHR14217 PTHR14217:SF6
NCBI CDD -
KEGG Orthology K00913; inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
Gene Ontology GO:0005622; intracellular GO:0005524ATP binding GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT4G08170 : Inositol 1,3,4-trisphosphate 5/6-kinase family protein
RAP-DB (Rice) LOC_Os10g01480.1 : Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed
MaizeGDB (Corn) Zm00025a003623 , Zm00025a052969
Brachypodium KQJ96196
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G278700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G075700 PHD-finger domain containing protein, putative, expressed -
2 Sobic.006G015800 "1,4-alpha-glucan branching enzyme/starch branching enzyme II, PULLULANASE 1, CHLOROPLASTIC"(PubMedID : 21853065)@Alpha amylase, catalytic domain containing protein, expressed -
3 Sobic.010G273800 "starch biosynthesis, 1,4-alpha-glucan branching enzyme"(PubMedID : 21853065)@1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme
4 Sobic.002G354800 zinc finger family protein, putative, expressed -
5 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
6 Sobic.002G230400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
7 Sobic.003G055200 expressed protein -
8 Sobic.004G163700 "1,4-alpha-glucan-branching enzyme 2"(PubMedID : 26186930)@"1,4-alpha-glucan branching enzyme IIB (Zm)"(PubMedID : 27208977)@Starch synthesis(PubMedID : 31624872)@"SbeIIb(Ortholog in maize:Jiang et al., 2013)"(PubMedID : 31659883)@1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme
9 Sobic.006G161300 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
10 Sobic.006G186300 fasciclin-like arabinogalactan protein, putative, expressed -
11 Sobic.007G204600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha amylase, catalytic domain containing protein, expressed K01214: ISA, isoamylase
12 Sobic.002G104300 FAS1, putative, expressed K10750: chromatin assembly factor 1 subunit A
13 Sobic.009G237700 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
14 Sobic.009G132600 methyl-binding domain protein MBD, putative, expressed -
15 Sobic.003G026900 expressed protein -
16 Sobic.010G047300 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.003G284700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
18 Sobic.010G207400 protein kinase domain containing protein, expressed -
19 Sobic.009G132650 - -
20 Sobic.006G046300 histidine kinase, putative, expressed -


Gene co-expression network
sample Sobic001G278700 Sobic001G278700 Sobic004G075700 Sobic004G075700 Sobic001G278700--Sobic004G075700 Sobic006G015800 Sobic006G015800 Sobic001G278700--Sobic006G015800 Sobic010G273800 Sobic010G273800 Sobic001G278700--Sobic010G273800 Sobic002G354800 Sobic002G354800 Sobic001G278700--Sobic002G354800 Sobic007G150700 Sobic007G150700 Sobic001G278700--Sobic007G150700 Sobic002G230400 Sobic002G230400 Sobic001G278700--Sobic002G230400 Sobic003G055200 Sobic003G055200 Sobic001G278700--Sobic003G055200 Sobic004G163700 Sobic004G163700 Sobic001G278700--Sobic004G163700 Sobic006G161300 Sobic006G161300 Sobic001G278700--Sobic006G161300 Sobic006G186300 Sobic006G186300 Sobic004G075700--Sobic006G186300 Sobic010G207400 Sobic010G207400 Sobic004G075700--Sobic010G207400 Sobic004G075700--Sobic006G015800 Sobic001G305100 Sobic001G305100 Sobic004G075700--Sobic001G305100 Sobic004G075700--Sobic001G278700 Sobic003G026900 Sobic003G026900 Sobic004G075700--Sobic003G026900 Sobic006G061100 Sobic006G061100 Sobic004G075700--Sobic006G061100 Sobic004G075700--Sobic006G161300 Sobic005G131800 Sobic005G131800 Sobic004G075700--Sobic005G131800 Sobic003G092600 Sobic003G092600 Sobic006G015800--Sobic003G092600 Sobic004G212350 Sobic004G212350 Sobic006G015800--Sobic004G212350 Sobic005G082300 Sobic005G082300 Sobic006G015800--Sobic005G082300 Sobic002G172200 Sobic002G172200 Sobic006G015800--Sobic002G172200 Sobic002G100000 Sobic002G100000 Sobic006G015800--Sobic002G100000 Sobic004G322901 Sobic004G322901 Sobic006G015800--Sobic004G322901 Sobic001G371600 Sobic001G371600 Sobic006G015800--Sobic001G371600 Sobic005G032500 Sobic005G032500 Sobic006G015800--Sobic005G032500 Sobic001G489075 Sobic001G489075 Sobic006G015800--Sobic001G489075 Sobic010G273800--Sobic006G015800 Sobic010G273800--Sobic003G092600 Sobic004G262100 Sobic004G262100 Sobic010G273800--Sobic004G262100 Sobic001G324800 Sobic001G324800 Sobic010G273800--Sobic001G324800 Sobic010G093400 Sobic010G093400 Sobic010G273800--Sobic010G093400 Sobic002G015800 Sobic002G015800 Sobic010G273800--Sobic002G015800 Sobic009G207500 Sobic009G207500 Sobic010G273800--Sobic009G207500 Sobic001G425900 Sobic001G425900 Sobic010G273800--Sobic001G425900 Sobic004G294100 Sobic004G294100 Sobic010G273800--Sobic004G294100 Sobic002G354800--Sobic002G230400 Sobic002G315100 Sobic002G315100 Sobic002G354800--Sobic002G315100 Sobic006G184200 Sobic006G184200 Sobic002G354800--Sobic006G184200 Sobic002G349000 Sobic002G349000 Sobic002G354800--Sobic002G349000 Sobic001G081800 Sobic001G081800 Sobic002G354800--Sobic001G081800 Sobic004G014100 Sobic004G014100 Sobic002G354800--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G354800--Sobic006G143300 Sobic002G354800--Sobic003G055200 Sobic002G354800--Sobic001G278700 Sobic001G442200 Sobic001G442200 Sobic007G150700--Sobic001G442200 Sobic004G196800 Sobic004G196800 Sobic007G150700--Sobic004G196800 Sobic005G171800 Sobic005G171800 Sobic007G150700--Sobic005G171800 Sobic007G150700--Sobic004G212350 Sobic007G150700--Sobic005G032500 Sobic010G060100 Sobic010G060100 Sobic007G150700--Sobic010G060100 Sobic007G150700--Sobic002G100000 Sobic007G150700--Sobic001G425900 Sobic010G084800 Sobic010G084800 Sobic007G150700--Sobic010G084800 Sobic002G230400--Sobic002G354800 Sobic002G230400--Sobic006G186300 Sobic002G230400--Sobic004G075700 Sobic002G230400--Sobic006G143300 Sobic002G230400--Sobic004G014100 Sobic002G230400--Sobic004G163700 Sobic010G112700 Sobic010G112700 Sobic002G230400--Sobic010G112700 Sobic002G343000 Sobic002G343000 Sobic002G230400--Sobic002G343000 Sobic002G230400--Sobic010G273800 Sobic003G055200--Sobic002G354800 Sobic010G207900 Sobic010G207900 Sobic003G055200--Sobic010G207900 Sobic003G055200--Sobic002G315100 Sobic003G055200--Sobic001G278700 Sobic003G055200--Sobic002G230400 Sobic003G055200--Sobic004G163700 Sobic002G174500 Sobic002G174500 Sobic003G055200--Sobic002G174500 Sobic007G086701 Sobic007G086701 Sobic003G055200--Sobic007G086701 Sobic006G257600 Sobic006G257600 Sobic003G055200--Sobic006G257600 Sobic001G194100 Sobic001G194100 Sobic004G163700--Sobic001G194100 Sobic004G163700--Sobic006G015800 Sobic004G163700--Sobic004G262100 Sobic004G163700--Sobic001G425900 Sobic006G046300 Sobic006G046300 Sobic004G163700--Sobic006G046300 Sobic007G041200 Sobic007G041200 Sobic004G163700--Sobic007G041200 Sobic004G163700--Sobic003G092600 Sobic004G163700--Sobic010G273800 Sobic001G083900 Sobic001G083900 Sobic004G163700--Sobic001G083900 Sobic005G035500 Sobic005G035500 Sobic006G161300--Sobic005G035500 Sobic002G217000 Sobic002G217000 Sobic006G161300--Sobic002G217000 Sobic002G058900 Sobic002G058900 Sobic006G161300--Sobic002G058900 Sobic002G059500 Sobic002G059500 Sobic006G161300--Sobic002G059500 Sobic006G004100 Sobic006G004100 Sobic006G161300--Sobic006G004100 Sobic006G040101 Sobic006G040101 Sobic006G161300--Sobic006G040101 Sobic002G101200 Sobic002G101200 Sobic006G161300--Sobic002G101200 Sobic008G159300 Sobic008G159300 Sobic006G161300--Sobic008G159300 Sobic003G266100 Sobic003G266100 Sobic006G161300--Sobic003G266100
Octagon: transcription factors


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