Gene annotation
Transcriptome id Sobic.002G104300.2,Sobic.002G104300.3,Sobic.002G104300.1,Sobic.002G104300.4
Synonym FAS1, NFB2, Sb02g008860
Functional annotation FAS1, putative, expressed
UniProt A0A1W0W395 , A0A1B6QAE2 , A0A1W0W3B7 , A0A1B6QAC2
Pfam PF12253
Panther DB PTHR15272 PTHR15272:SF0
NCBI CDD KOG4364; Chromatin assembly factor-I
KEGG Orthology K10750; chromatin assembly factor 1 subunit A
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65470 : chromatin assembly factor-1 (FASCIATA1) (FAS1)
RAP-DB (Rice) LOC_Os07g17210.1 : FAS1, putative, expressed
MaizeGDB (Corn) Zm00025a045565
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G083900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
2 Sobic.001G425900 EDM2, putative, expressed -
3 Sobic.004G163700 "1,4-alpha-glucan-branching enzyme 2"(PubMedID : 26186930)@"1,4-alpha-glucan branching enzyme IIB (Zm)"(PubMedID : 27208977)@Starch synthesis(PubMedID : 31624872)@"SbeIIb(Ortholog in maize:Jiang et al., 2013)"(PubMedID : 31659883)@1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme
4 Sobic.004G339900 expressed protein -
5 Sobic.010G273800 "starch biosynthesis, 1,4-alpha-glucan branching enzyme"(PubMedID : 21853065)@1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme
6 Sobic.001G278700 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
7 Sobic.004G065850 - -
8 Sobic.002G420400 - -
9 Sobic.004G200400 protein kinase domain containing protein, expressed -
10 Sobic.006G046300 histidine kinase, putative, expressed -
11 Sobic.004G065800 - -
12 Sobic.004G071050 - -
13 Sobic.002G370800 tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
14 Sobic.007G041200 cytochrome P450, putative, expressed -
15 Sobic.001G485200 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
16 Sobic.001G194100 DEFL6 - Defensin and Defensin-like DEFL family, expressed -
17 Sobic.007G204600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha amylase, catalytic domain containing protein, expressed K01214: ISA, isoamylase
18 Sobic.009G043400 OsFBL60 - F-box domain and LRR containing protein, expressed K10268: F-box and leucine-rich repeat protein 2/20
19 Sobic.003G412200 inducer of CBF expression 2, putative, expressed -
20 Sobic.002G349000 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3


Gene co-expression network
sample Sobic002G104300 Sobic002G104300 Sobic001G083900 Sobic001G083900 Sobic002G104300--Sobic001G083900 Sobic001G425900 Sobic001G425900 Sobic002G104300--Sobic001G425900 Sobic004G163700 Sobic004G163700 Sobic002G104300--Sobic004G163700 Sobic004G339900 Sobic004G339900 Sobic002G104300--Sobic004G339900 Sobic010G273800 Sobic010G273800 Sobic002G104300--Sobic010G273800 Sobic001G278700 Sobic001G278700 Sobic002G104300--Sobic001G278700 Sobic004G065850 Sobic004G065850 Sobic002G104300--Sobic004G065850 Sobic002G420400 Sobic002G420400 Sobic002G104300--Sobic002G420400 Sobic004G200400 Sobic004G200400 Sobic002G104300--Sobic004G200400 Sobic001G083900--Sobic002G104300 Sobic001G083900--Sobic001G425900 Sobic001G083900--Sobic010G273800 Sobic001G083900--Sobic004G163700 Sobic009G013200 Sobic009G013200 Sobic001G083900--Sobic009G013200 Sobic003G213100 Sobic003G213100 Sobic001G083900--Sobic003G213100 Sobic003G412200 Sobic003G412200 Sobic001G083900--Sobic003G412200 Sobic007G204600 Sobic007G204600 Sobic001G083900--Sobic007G204600 Sobic005G003100 Sobic005G003100 Sobic001G083900--Sobic005G003100 Sobic010G118200 Sobic010G118200 Sobic001G425900--Sobic010G118200 Sobic006G271400 Sobic006G271400 Sobic001G425900--Sobic006G271400 Sobic009G033500 Sobic009G033500 Sobic001G425900--Sobic009G033500 Sobic010G058000 Sobic010G058000 Sobic001G425900--Sobic010G058000 Sobic002G101200 Sobic002G101200 Sobic001G425900--Sobic002G101200 Sobic002G166800 Sobic002G166800 Sobic001G425900--Sobic002G166800 Sobic010G209300 Sobic010G209300 Sobic001G425900--Sobic010G209300 Sobic006G031000 Sobic006G031000 Sobic001G425900--Sobic006G031000 Sobic007G091200 Sobic007G091200 Sobic001G425900--Sobic007G091200 Sobic001G194100 Sobic001G194100 Sobic004G163700--Sobic001G194100 Sobic006G015800 Sobic006G015800 Sobic004G163700--Sobic006G015800 Sobic004G262100 Sobic004G262100 Sobic004G163700--Sobic004G262100 Sobic004G163700--Sobic001G425900 Sobic006G046300 Sobic006G046300 Sobic004G163700--Sobic006G046300 Sobic007G041200 Sobic007G041200 Sobic004G163700--Sobic007G041200 Sobic003G092600 Sobic003G092600 Sobic004G163700--Sobic003G092600 Sobic004G163700--Sobic010G273800 Sobic004G163700--Sobic001G083900 Sobic004G339900--Sobic002G420400 Sobic004G071050 Sobic004G071050 Sobic004G339900--Sobic004G071050 Sobic001G485200 Sobic001G485200 Sobic004G339900--Sobic001G485200 Sobic004G339900--Sobic001G194100 Sobic010G152000 Sobic010G152000 Sobic004G339900--Sobic010G152000 Sobic004G339900--Sobic007G041200 Sobic008G116100 Sobic008G116100 Sobic004G339900--Sobic008G116100 Sobic004G065800 Sobic004G065800 Sobic004G339900--Sobic004G065800 Sobic004G339900--Sobic004G163700 Sobic010G273800--Sobic006G015800 Sobic010G273800--Sobic003G092600 Sobic010G273800--Sobic004G262100 Sobic001G324800 Sobic001G324800 Sobic010G273800--Sobic001G324800 Sobic010G093400 Sobic010G093400 Sobic010G273800--Sobic010G093400 Sobic002G015800 Sobic002G015800 Sobic010G273800--Sobic002G015800 Sobic009G207500 Sobic009G207500 Sobic010G273800--Sobic009G207500 Sobic010G273800--Sobic001G425900 Sobic004G294100 Sobic004G294100 Sobic010G273800--Sobic004G294100 Sobic004G075700 Sobic004G075700 Sobic001G278700--Sobic004G075700 Sobic001G278700--Sobic006G015800 Sobic001G278700--Sobic010G273800 Sobic002G354800 Sobic002G354800 Sobic001G278700--Sobic002G354800 Sobic007G150700 Sobic007G150700 Sobic001G278700--Sobic007G150700 Sobic002G230400 Sobic002G230400 Sobic001G278700--Sobic002G230400 Sobic003G055200 Sobic003G055200 Sobic001G278700--Sobic003G055200 Sobic001G278700--Sobic004G163700 Sobic006G161300 Sobic006G161300 Sobic001G278700--Sobic006G161300 Sobic004G065850--Sobic002G104300 Sobic001G313100 Sobic001G313100 Sobic004G065850--Sobic001G313100 Sobic004G065850--Sobic001G083900 Sobic001G505900 Sobic001G505900 Sobic004G065850--Sobic001G505900 Sobic006G155300 Sobic006G155300 Sobic004G065850--Sobic006G155300 Sobic001G469300 Sobic001G469300 Sobic004G065850--Sobic001G469300 Sobic004G065850--Sobic001G485200 Sobic003G392350 Sobic003G392350 Sobic004G065850--Sobic003G392350 Sobic009G043400 Sobic009G043400 Sobic004G065850--Sobic009G043400 Sobic002G420400--Sobic004G339900 Sobic002G420400--Sobic004G071050 Sobic005G036200 Sobic005G036200 Sobic002G420400--Sobic005G036200 Sobic004G242200 Sobic004G242200 Sobic002G420400--Sobic004G242200 Sobic002G420400--Sobic001G485200 Sobic003G379900 Sobic003G379900 Sobic002G420400--Sobic003G379900 Sobic001G375800 Sobic001G375800 Sobic002G420400--Sobic001G375800 Sobic002G420400--Sobic010G152000 Sobic002G420400--Sobic001G194100 Sobic004G200400--Sobic009G207500 Sobic004G200400--Sobic007G204600 Sobic005G052100 Sobic005G052100 Sobic004G200400--Sobic005G052100 Sobic005G075000 Sobic005G075000 Sobic004G200400--Sobic005G075000 Sobic004G200400--Sobic005G003100 Sobic002G069800 Sobic002G069800 Sobic004G200400--Sobic002G069800 Sobic001G330600 Sobic001G330600 Sobic004G200400--Sobic001G330600 Sobic004G200400--Sobic009G013200 Sobic004G200400--Sobic003G213100
Octagon: transcription factors


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