Gene annotation
Transcriptome id Sobic.009G043400.1
Synonym Sb09g003670
Functional annotation OsFBL60 - F-box domain and LRR containing protein, expressed
UniProt C5Z024
Pfam -
Panther DB PTHR24006
NCBI CDD KOG1947; Leucine rich repeat proteins, some proteins contain F-box
KEGG Orthology K10268; F-box and leucine-rich repeat protein 2/20
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80570 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os12g33220.1 : F-box/LRR-repeat protein 14, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G104300 FAS1, putative, expressed K10750: chromatin assembly factor 1 subunit A
2 Sobic.001G083900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
3 Sobic.008G065932 - -
4 Sobic.010G273800 "starch biosynthesis, 1,4-alpha-glucan branching enzyme"(PubMedID : 21853065)@1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme
5 Sobic.009G207500 OsFBX238 - F-box domain containing protein, expressed -
6 Sobic.001G278700 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
7 Sobic.009G156200 starch binding domain containing protein, putative, expressed -
8 Sobic.002G349000 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
9 Sobic.004G200400 protein kinase domain containing protein, expressed -
10 Sobic.001G425900 EDM2, putative, expressed -
11 Sobic.006G140300 expressed protein -
12 Sobic.008G176300 YABBY domain containing protein, putative, expressed -
13 Sobic.005G075000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.002G147500 early fruit mRNA, putative, expressed -
15 Sobic.006G271400 methyl-CpG binding domain containing protein, expressed -
16 Sobic.006G036201 - -
17 Sobic.005G074900 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G363300 hydrolase, alpha/beta fold family protein, putative, expressed -
19 Sobic.008G011400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
20 Sobic.001G053700 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C


Gene co-expression network
sample Sobic009G043400 Sobic009G043400 Sobic002G104300 Sobic002G104300 Sobic009G043400--Sobic002G104300 Sobic001G083900 Sobic001G083900 Sobic009G043400--Sobic001G083900 Sobic008G065932 Sobic008G065932 Sobic009G043400--Sobic008G065932 Sobic010G273800 Sobic010G273800 Sobic009G043400--Sobic010G273800 Sobic009G207500 Sobic009G207500 Sobic009G043400--Sobic009G207500 Sobic001G278700 Sobic001G278700 Sobic009G043400--Sobic001G278700 Sobic009G156200 Sobic009G156200 Sobic009G043400--Sobic009G156200 Sobic002G349000 Sobic002G349000 Sobic009G043400--Sobic002G349000 Sobic004G200400 Sobic004G200400 Sobic009G043400--Sobic004G200400 Sobic002G104300--Sobic001G083900 Sobic001G425900 Sobic001G425900 Sobic002G104300--Sobic001G425900 Sobic004G163700 Sobic004G163700 Sobic002G104300--Sobic004G163700 Sobic004G339900 Sobic004G339900 Sobic002G104300--Sobic004G339900 Sobic002G104300--Sobic010G273800 Sobic002G104300--Sobic001G278700 Sobic004G065850 Sobic004G065850 Sobic002G104300--Sobic004G065850 Sobic002G420400 Sobic002G420400 Sobic002G104300--Sobic002G420400 Sobic002G104300--Sobic004G200400 Sobic001G083900--Sobic002G104300 Sobic001G083900--Sobic001G425900 Sobic001G083900--Sobic010G273800 Sobic001G083900--Sobic004G163700 Sobic009G013200 Sobic009G013200 Sobic001G083900--Sobic009G013200 Sobic003G213100 Sobic003G213100 Sobic001G083900--Sobic003G213100 Sobic003G412200 Sobic003G412200 Sobic001G083900--Sobic003G412200 Sobic007G204600 Sobic007G204600 Sobic001G083900--Sobic007G204600 Sobic005G003100 Sobic005G003100 Sobic001G083900--Sobic005G003100 Sobic008G065932--Sobic009G043400 Sobic006G046300 Sobic006G046300 Sobic008G065932--Sobic006G046300 Sobic006G143300 Sobic006G143300 Sobic008G065932--Sobic006G143300 Sobic008G065932--Sobic001G278700 Sobic008G065932--Sobic002G349000 Sobic001G273000 Sobic001G273000 Sobic008G065932--Sobic001G273000 Sobic006G140300 Sobic006G140300 Sobic008G065932--Sobic006G140300 Sobic008G176300 Sobic008G176300 Sobic008G065932--Sobic008G176300 Sobic003G217500 Sobic003G217500 Sobic008G065932--Sobic003G217500 Sobic006G015800 Sobic006G015800 Sobic010G273800--Sobic006G015800 Sobic003G092600 Sobic003G092600 Sobic010G273800--Sobic003G092600 Sobic004G262100 Sobic004G262100 Sobic010G273800--Sobic004G262100 Sobic001G324800 Sobic001G324800 Sobic010G273800--Sobic001G324800 Sobic010G093400 Sobic010G093400 Sobic010G273800--Sobic010G093400 Sobic002G015800 Sobic002G015800 Sobic010G273800--Sobic002G015800 Sobic010G273800--Sobic009G207500 Sobic010G273800--Sobic001G425900 Sobic004G294100 Sobic004G294100 Sobic010G273800--Sobic004G294100 Sobic005G090500 Sobic005G090500 Sobic009G207500--Sobic005G090500 Sobic006G271400 Sobic006G271400 Sobic009G207500--Sobic006G271400 Sobic002G053100 Sobic002G053100 Sobic009G207500--Sobic002G053100 Sobic010G209300 Sobic010G209300 Sobic009G207500--Sobic010G209300 Sobic006G031000 Sobic006G031000 Sobic009G207500--Sobic006G031000 Sobic009G021300 Sobic009G021300 Sobic009G207500--Sobic009G021300 Sobic005G075000 Sobic005G075000 Sobic009G207500--Sobic005G075000 Sobic001G142600 Sobic001G142600 Sobic009G207500--Sobic001G142600 Sobic002G408700 Sobic002G408700 Sobic009G207500--Sobic002G408700 Sobic004G075700 Sobic004G075700 Sobic001G278700--Sobic004G075700 Sobic001G278700--Sobic006G015800 Sobic001G278700--Sobic010G273800 Sobic002G354800 Sobic002G354800 Sobic001G278700--Sobic002G354800 Sobic007G150700 Sobic007G150700 Sobic001G278700--Sobic007G150700 Sobic002G230400 Sobic002G230400 Sobic001G278700--Sobic002G230400 Sobic003G055200 Sobic003G055200 Sobic001G278700--Sobic003G055200 Sobic001G278700--Sobic004G163700 Sobic006G161300 Sobic006G161300 Sobic001G278700--Sobic006G161300 Sobic009G156200--Sobic004G262100 Sobic001G053700 Sobic001G053700 Sobic009G156200--Sobic001G053700 Sobic009G156200--Sobic002G349000 Sobic002G360900 Sobic002G360900 Sobic009G156200--Sobic002G360900 Sobic003G042200 Sobic003G042200 Sobic009G156200--Sobic003G042200 Sobic004G340566 Sobic004G340566 Sobic009G156200--Sobic004G340566 Sobic002G381750 Sobic002G381750 Sobic009G156200--Sobic002G381750 Sobic009G234500 Sobic009G234500 Sobic009G156200--Sobic009G234500 Sobic003G062101 Sobic003G062101 Sobic009G156200--Sobic003G062101 Sobic002G221100 Sobic002G221100 Sobic002G349000--Sobic002G221100 Sobic002G349000--Sobic001G324800 Sobic002G349000--Sobic006G143300 Sobic004G218000 Sobic004G218000 Sobic002G349000--Sobic004G218000 Sobic002G349000--Sobic002G354800 Sobic004G014100 Sobic004G014100 Sobic002G349000--Sobic004G014100 Sobic002G349000--Sobic009G156200 Sobic002G349000--Sobic001G425900 Sobic002G349000--Sobic004G262100 Sobic004G200400--Sobic009G207500 Sobic004G200400--Sobic007G204600 Sobic005G052100 Sobic005G052100 Sobic004G200400--Sobic005G052100 Sobic004G200400--Sobic005G075000 Sobic004G200400--Sobic005G003100 Sobic002G069800 Sobic002G069800 Sobic004G200400--Sobic002G069800 Sobic001G330600 Sobic001G330600 Sobic004G200400--Sobic001G330600 Sobic004G200400--Sobic009G013200 Sobic004G200400--Sobic003G213100
Octagon: transcription factors


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