Gene annotation
Transcriptome id Sobic.009G237700.1
Synonym Sb09g029000
Functional annotation aldose 1-epimerase, putative, expressed
UniProt C5YVZ4
Pfam PF01263
Panther DB PTHR11122 PTHR11122:SF23
NCBI CDD KOG1594; Uncharacterized enzymes related to aldose 1-epimerase
KEGG Orthology K01792; glucose-6-phosphate 1-epimerase
Gene Ontology GO:0016853; isomerase activity GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT3G61610 : Galactose mutarotase-like superfamily protein
RAP-DB (Rice) LOC_Os05g49430.1 : aldose 1-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a028176 , Zm00025a044636
Brachypodium KQK04784 , KQK04785 , PNT75122
Barley HORVU1Hr1G090020.4 , HORVU1Hr1G090020.5 , HORVU1Hr1G090020.6 , HORVU1Hr1G090020.7 , HORVU1Hr1G090020.1 , HORVU1Hr1G090020.2 , HORVU1Hr1G090020.8 , HORVU1Hr1G090020.9 , HORVU1Hr1G090020.12 , HORVU1Hr1G090020.10 , HORVU1Hr1G090020.11
Wheat TraesCS1A02G409900 , TraesCS1D02G417300 , TraesCS1D02G417300 , TraesCS1B02G439900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G230500 "Sh2(Ortholog in maize:Jiang et al., 2013a)"(PubMedID : 31659869)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
2 Sobic.009G207500 OsFBX238 - F-box domain containing protein, expressed -
3 Sobic.002G053100 RNA recognition motif containing protein, expressed -
4 Sobic.007G172100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@vignain precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
5 Sobic.010G168500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
6 Sobic.003G291100 - -
7 Sobic.003G063900 - -
8 Sobic.005G090500 - -
9 Sobic.005G171800 OsFBDUF20 - F-box and DUF domain containing protein, expressed -
10 Sobic.001G392900 - -
11 Sobic.006G031000 MYB family transcription factor, putative, expressed -
12 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
13 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
14 Sobic.009G021300 Jacalin-like lectin domain containing protein, putative, expressed -
15 Sobic.008G071900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
16 Sobic.010G102900 protein of unknown function DUF1675 domain containing protein, expressed -
17 Sobic.010G209300 expressed protein -
18 Sobic.003G227800 cytochrome P450 72A1, putative, expressed -
19 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
20 Sobic.006G104800 dnaJ domain containing protein, expressed -


Gene co-expression network
sample Sobic009G237700 Sobic009G237700 Sobic003G230500 Sobic003G230500 Sobic009G237700--Sobic003G230500 Sobic009G207500 Sobic009G207500 Sobic009G237700--Sobic009G207500 Sobic002G053100 Sobic002G053100 Sobic009G237700--Sobic002G053100 Sobic007G172100 Sobic007G172100 Sobic009G237700--Sobic007G172100 Sobic010G168500 Sobic010G168500 Sobic009G237700--Sobic010G168500 Sobic003G291100 Sobic003G291100 Sobic009G237700--Sobic003G291100 Sobic003G063900 Sobic003G063900 Sobic009G237700--Sobic003G063900 Sobic005G090500 Sobic005G090500 Sobic009G237700--Sobic005G090500 Sobic005G171800 Sobic005G171800 Sobic009G237700--Sobic005G171800 Sobic005G001500 Sobic005G001500 Sobic003G230500--Sobic005G001500 Sobic003G307600 Sobic003G307600 Sobic003G230500--Sobic003G307600 Sobic009G021300 Sobic009G021300 Sobic003G230500--Sobic009G021300 Sobic003G227800 Sobic003G227800 Sobic003G230500--Sobic003G227800 Sobic002G408700 Sobic002G408700 Sobic003G230500--Sobic002G408700 Sobic010G102900 Sobic010G102900 Sobic003G230500--Sobic010G102900 Sobic005G089101 Sobic005G089101 Sobic003G230500--Sobic005G089101 Sobic001G142600 Sobic001G142600 Sobic003G230500--Sobic001G142600 Sobic008G071900 Sobic008G071900 Sobic003G230500--Sobic008G071900 Sobic009G207500--Sobic005G090500 Sobic006G271400 Sobic006G271400 Sobic009G207500--Sobic006G271400 Sobic009G207500--Sobic002G053100 Sobic010G209300 Sobic010G209300 Sobic009G207500--Sobic010G209300 Sobic006G031000 Sobic006G031000 Sobic009G207500--Sobic006G031000 Sobic009G207500--Sobic009G021300 Sobic005G075000 Sobic005G075000 Sobic009G207500--Sobic005G075000 Sobic009G207500--Sobic001G142600 Sobic009G207500--Sobic002G408700 Sobic006G104800 Sobic006G104800 Sobic002G053100--Sobic006G104800 Sobic002G053100--Sobic001G142600 Sobic001G392900 Sobic001G392900 Sobic002G053100--Sobic001G392900 Sobic002G053100--Sobic003G063900 Sobic002G053100--Sobic005G090500 Sobic002G053100--Sobic010G102900 Sobic002G053100--Sobic003G227800 Sobic002G053100--Sobic008G071900 Sobic008G168400 Sobic008G168400 Sobic002G053100--Sobic008G168400 Sobic001G200900 Sobic001G200900 Sobic007G172100--Sobic001G200900 Sobic009G061900 Sobic009G061900 Sobic007G172100--Sobic009G061900 Sobic009G052400 Sobic009G052400 Sobic007G172100--Sobic009G052400 Sobic005G174000 Sobic005G174000 Sobic007G172100--Sobic005G174000 Sobic004G133600 Sobic004G133600 Sobic007G172100--Sobic004G133600 Sobic005G186300 Sobic005G186300 Sobic007G172100--Sobic005G186300 Sobic002G293100 Sobic002G293100 Sobic007G172100--Sobic002G293100 Sobic002G192600 Sobic002G192600 Sobic007G172100--Sobic002G192600 Sobic004G171600 Sobic004G171600 Sobic007G172100--Sobic004G171600 Sobic008G039700 Sobic008G039700 Sobic010G168500--Sobic008G039700 Sobic009G071600 Sobic009G071600 Sobic010G168500--Sobic009G071600 Sobic007G034900 Sobic007G034900 Sobic010G168500--Sobic007G034900 Sobic001G259250 Sobic001G259250 Sobic010G168500--Sobic001G259250 Sobic005G153200 Sobic005G153200 Sobic010G168500--Sobic005G153200 Sobic010G200200 Sobic010G200200 Sobic010G168500--Sobic010G200200 Sobic004G142000 Sobic004G142000 Sobic010G168500--Sobic004G142000 Sobic001G037800 Sobic001G037800 Sobic010G168500--Sobic001G037800 Sobic002G338600 Sobic002G338600 Sobic010G168500--Sobic002G338600 Sobic003G291100--Sobic002G408700 Sobic003G291100--Sobic010G209300 Sobic007G122932 Sobic007G122932 Sobic003G291100--Sobic007G122932 Sobic003G291100--Sobic005G001500 Sobic003G291100--Sobic005G089101 Sobic003G225800 Sobic003G225800 Sobic003G291100--Sobic003G225800 Sobic003G291100--Sobic009G021300 Sobic010G181900 Sobic010G181900 Sobic003G291100--Sobic010G181900 Sobic003G291100--Sobic003G307600 Sobic003G063900--Sobic008G168400 Sobic003G063900--Sobic003G227800 Sobic005G079300 Sobic005G079300 Sobic003G063900--Sobic005G079300 Sobic001G129900 Sobic001G129900 Sobic003G063900--Sobic001G129900 Sobic002G381600 Sobic002G381600 Sobic003G063900--Sobic002G381600 Sobic006G080500 Sobic006G080500 Sobic003G063900--Sobic006G080500 Sobic005G056300 Sobic005G056300 Sobic003G063900--Sobic005G056300 Sobic003G063900--Sobic001G142600 Sobic003G063900--Sobic009G052400 Sobic005G074800 Sobic005G074800 Sobic005G090500--Sobic005G074800 Sobic005G148600 Sobic005G148600 Sobic005G090500--Sobic005G148600 Sobic005G090500--Sobic002G053100 Sobic004G196200 Sobic004G196200 Sobic005G090500--Sobic004G196200 Sobic005G090500--Sobic006G271400 Sobic004G171500 Sobic004G171500 Sobic005G090500--Sobic004G171500 Sobic006G064700 Sobic006G064700 Sobic005G090500--Sobic006G064700 Sobic008G001700 Sobic008G001700 Sobic005G090500--Sobic008G001700 Sobic005G074900 Sobic005G074900 Sobic005G090500--Sobic005G074900 Sobic007G037200 Sobic007G037200 Sobic005G171800--Sobic007G037200 Sobic005G171800--Sobic008G168400 Sobic007G187100 Sobic007G187100 Sobic005G171800--Sobic007G187100 Sobic005G032500 Sobic005G032500 Sobic005G171800--Sobic005G032500 Sobic005G171800--Sobic009G061900 Sobic004G212350 Sobic004G212350 Sobic005G171800--Sobic004G212350 Sobic005G171800--Sobic002G293100 Sobic002G100000 Sobic002G100000 Sobic005G171800--Sobic002G100000 Sobic005G171800--Sobic010G181900
Octagon: transcription factors


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