Gene annotation
Transcriptome id Sobic.003G291100.1
Synonym
Functional annotation -
UniProt A0A1B6Q5Y8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
2 Sobic.010G209300 expressed protein -
3 Sobic.007G122932 - -
4 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
5 Sobic.005G089101 - K08066: NFYC, nuclear transcription factor Y, gamma
6 Sobic.003G225800 AAA-type ATPase family protein, putative, expressed -
7 Sobic.009G021300 Jacalin-like lectin domain containing protein, putative, expressed -
8 Sobic.010G181900 expressed protein -
9 Sobic.003G307600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.002G217000 expressed protein -
11 Sobic.002G166800 RNA recognition motif containing protein, putative, expressed -
12 Sobic.002G100000 OsFBL33 - F-box domain and LRR containing protein, expressed -
13 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
14 Sobic.002G101200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
15 Sobic.005G197000 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
16 Sobic.003G213100 AAA-type ATPase family protein, putative, expressed -
17 Sobic.007G123000 sex determination protein tasselseed-2, putative, expressed -
18 Sobic.009G051201 - -
19 Sobic.007G054700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
20 Sobic.005G075000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic003G291100 Sobic003G291100 Sobic002G408700 Sobic002G408700 Sobic003G291100--Sobic002G408700 Sobic010G209300 Sobic010G209300 Sobic003G291100--Sobic010G209300 Sobic007G122932 Sobic007G122932 Sobic003G291100--Sobic007G122932 Sobic005G001500 Sobic005G001500 Sobic003G291100--Sobic005G001500 Sobic005G089101 Sobic005G089101 Sobic003G291100--Sobic005G089101 Sobic003G225800 Sobic003G225800 Sobic003G291100--Sobic003G225800 Sobic009G021300 Sobic009G021300 Sobic003G291100--Sobic009G021300 Sobic010G181900 Sobic010G181900 Sobic003G291100--Sobic010G181900 Sobic003G307600 Sobic003G307600 Sobic003G291100--Sobic003G307600 Sobic002G408700--Sobic005G001500 Sobic002G408700--Sobic010G209300 Sobic002G408700--Sobic009G021300 Sobic001G142600 Sobic001G142600 Sobic002G408700--Sobic001G142600 Sobic002G408700--Sobic007G122932 Sobic002G408700--Sobic010G181900 Sobic010G102900 Sobic010G102900 Sobic002G408700--Sobic010G102900 Sobic002G408700--Sobic003G291100 Sobic003G227800 Sobic003G227800 Sobic002G408700--Sobic003G227800 Sobic010G209300--Sobic002G408700 Sobic010G209300--Sobic007G122932 Sobic010G209300--Sobic009G021300 Sobic010G209300--Sobic003G291100 Sobic010G209300--Sobic005G001500 Sobic006G271400 Sobic006G271400 Sobic010G209300--Sobic006G271400 Sobic010G209300--Sobic001G142600 Sobic007G147300 Sobic007G147300 Sobic010G209300--Sobic007G147300 Sobic010G058000 Sobic010G058000 Sobic010G209300--Sobic010G058000 Sobic007G122932--Sobic009G021300 Sobic007G122932--Sobic007G147300 Sobic007G123000 Sobic007G123000 Sobic007G122932--Sobic007G123000 Sobic007G122932--Sobic005G001500 Sobic007G122932--Sobic002G408700 Sobic007G122932--Sobic010G209300 Sobic009G013200 Sobic009G013200 Sobic007G122932--Sobic009G013200 Sobic007G122932--Sobic003G307600 Sobic008G001700 Sobic008G001700 Sobic007G122932--Sobic008G001700 Sobic005G001500--Sobic009G021300 Sobic005G001500--Sobic002G408700 Sobic005G001500--Sobic003G227800 Sobic005G001500--Sobic010G102900 Sobic005G001500--Sobic001G142600 Sobic005G001500--Sobic003G307600 Sobic008G071900 Sobic008G071900 Sobic005G001500--Sobic008G071900 Sobic003G063900 Sobic003G063900 Sobic005G001500--Sobic003G063900 Sobic005G001500--Sobic007G122932 Sobic002G100000 Sobic002G100000 Sobic005G089101--Sobic002G100000 Sobic005G089101--Sobic003G225800 Sobic005G089101--Sobic010G181900 Sobic005G197000 Sobic005G197000 Sobic005G089101--Sobic005G197000 Sobic002G217000 Sobic002G217000 Sobic005G089101--Sobic002G217000 Sobic005G089101--Sobic003G307600 Sobic005G089101--Sobic005G001500 Sobic007G037200 Sobic007G037200 Sobic005G089101--Sobic007G037200 Sobic004G212350 Sobic004G212350 Sobic005G089101--Sobic004G212350 Sobic003G225800--Sobic005G197000 Sobic003G213100 Sobic003G213100 Sobic003G225800--Sobic003G213100 Sobic003G225800--Sobic002G217000 Sobic003G225800--Sobic005G089101 Sobic003G225800--Sobic002G100000 Sobic006G004100 Sobic006G004100 Sobic003G225800--Sobic006G004100 Sobic002G101200 Sobic002G101200 Sobic003G225800--Sobic002G101200 Sobic003G225800--Sobic003G307600 Sobic003G225800--Sobic007G037200 Sobic009G021300--Sobic005G001500 Sobic009G021300--Sobic007G122932 Sobic009G021300--Sobic002G408700 Sobic009G021300--Sobic010G102900 Sobic009G021300--Sobic008G001700 Sobic009G021300--Sobic008G071900 Sobic009G021300--Sobic007G147300 Sobic009G021300--Sobic007G123000 Sobic009G021300--Sobic003G227800 Sobic008G168400 Sobic008G168400 Sobic010G181900--Sobic008G168400 Sobic010G181900--Sobic002G100000 Sobic010G181900--Sobic005G089101 Sobic010G181900--Sobic003G307600 Sobic010G181900--Sobic003G063900 Sobic005G079300 Sobic005G079300 Sobic010G181900--Sobic005G079300 Sobic007G187100 Sobic007G187100 Sobic010G181900--Sobic007G187100 Sobic010G181900--Sobic004G212350 Sobic002G381600 Sobic002G381600 Sobic010G181900--Sobic002G381600 Sobic003G307600--Sobic010G181900 Sobic003G307600--Sobic005G001500 Sobic003G307600--Sobic005G089101 Sobic003G307600--Sobic002G100000 Sobic003G307600--Sobic003G227800 Sobic003G307600--Sobic003G063900 Sobic003G307600--Sobic002G408700 Sobic003G307600--Sobic008G168400 Sobic003G307600--Sobic009G021300
Octagon: transcription factors


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