Gene annotation
Transcriptome id Sobic.008G118100.1,Sobic.008G118100.2
Synonym Sb08g017180, ACBP5
Functional annotation kelch repeat protein, putative, expressed
UniProt A0A1B6PD59 , A0A1B6PD69
Pfam PF01344 PF13418
Panther DB PTHR23244 PTHR23244:SF308
NCBI CDD KOG0379; Kelch repeat-containing proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G27630 : acyl-CoA binding protein 5
RAP-DB (Rice) LOC_Os12g35350.1 : kelch repeat protein, putative, expressed
MaizeGDB (Corn) Zm00025a054353
Brachypodium KQJ86456 , KQJ86455 , KQJ86454 , KQJ87463 , KQJ87462
Barley HORVU5Hr1G025430.28 , HORVU5Hr1G025430.29 , HORVU5Hr1G025430.22 , HORVU5Hr1G025430.23 , HORVU5Hr1G025430.20 , HORVU5Hr1G025430.26 , HORVU5Hr1G025430.27 , HORVU5Hr1G025430.24 , HORVU5Hr1G025430.25 , HORVU5Hr1G025430.11 , HORVU5Hr1G025430.17 , HORVU5Hr1G025430.16 , HORVU5Hr1G025430.15 , HORVU5Hr1G025430.19 , HORVU5Hr1G025430.3 , HORVU5Hr1G025430.2 , HORVU5Hr1G025430.1 , HORVU5Hr1G025430.7 , HORVU5Hr1G025430.5 , HORVU5Hr1G025430.4 , HORVU5Hr1G025430.9 , HORVU5Hr1G025430.8 , HORVU5Hr1G025430.31 , HORVU5Hr1G025430.30 , HORVU5Hr1G025430.33
Wheat TraesCS4A02G167800 , TraesCS5D02G106700 , TraesCS5A02G094400 , TraesCS5B02G100500 , TraesCS4D02G147200 , TraesCSU02G068300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
2 Sobic.002G187600 expressed protein -
3 Sobic.004G286200 DUF630/DUF632 domains containing protein, putative, expressed -
4 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
5 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
6 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
7 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
8 Sobic.008G090400 - -
9 Sobic.005G157300 protein binding protein, putative, expressed -
10 Sobic.001G242500 - -
11 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
12 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
13 Sobic.010G087100 MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed K10738: DNA helicase MCM9
14 Sobic.002G168000 expressed protein -
15 Sobic.006G262501 - -
16 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
17 Sobic.006G008300 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
18 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
19 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
20 Sobic.005G018050 - -


Gene co-expression network
sample Sobic008G118100 Sobic008G118100 Sobic007G050800 Sobic007G050800 Sobic008G118100--Sobic007G050800 Sobic002G187600 Sobic002G187600 Sobic008G118100--Sobic002G187600 Sobic004G286200 Sobic004G286200 Sobic008G118100--Sobic004G286200 Sobic006G281900 Sobic006G281900 Sobic008G118100--Sobic006G281900 Sobic009G225500 Sobic009G225500 Sobic008G118100--Sobic009G225500 Sobic002G095300 Sobic002G095300 Sobic008G118100--Sobic002G095300 Sobic009G002200 Sobic009G002200 Sobic008G118100--Sobic009G002200 Sobic008G090400 Sobic008G090400 Sobic008G118100--Sobic008G090400 Sobic005G157300 Sobic005G157300 Sobic008G118100--Sobic005G157300 Sobic007G050800--Sobic009G002200 Sobic006G016700 Sobic006G016700 Sobic007G050800--Sobic006G016700 Sobic007G050800--Sobic008G118100 Sobic006G226000 Sobic006G226000 Sobic007G050800--Sobic006G226000 Sobic002G168000 Sobic002G168000 Sobic007G050800--Sobic002G168000 Sobic005G153000 Sobic005G153000 Sobic007G050800--Sobic005G153000 Sobic006G135800 Sobic006G135800 Sobic007G050800--Sobic006G135800 Sobic007G187700 Sobic007G187700 Sobic007G050800--Sobic007G187700 Sobic009G012600 Sobic009G012600 Sobic007G050800--Sobic009G012600 Sobic002G187600--Sobic002G095300 Sobic002G187600--Sobic008G118100 Sobic002G187600--Sobic007G050800 Sobic003G102700 Sobic003G102700 Sobic002G187600--Sobic003G102700 Sobic002G187600--Sobic004G286200 Sobic002G187600--Sobic008G090400 Sobic002G187600--Sobic007G187700 Sobic001G199500 Sobic001G199500 Sobic002G187600--Sobic001G199500 Sobic003G290400 Sobic003G290400 Sobic002G187600--Sobic003G290400 Sobic004G286200--Sobic008G118100 Sobic004G286200--Sobic009G225500 Sobic009G224300 Sobic009G224300 Sobic004G286200--Sobic009G224300 Sobic001G493100 Sobic001G493100 Sobic004G286200--Sobic001G493100 Sobic004G286200--Sobic002G187600 Sobic004G286200--Sobic007G050800 Sobic004G286200--Sobic006G016700 Sobic004G286200--Sobic006G135800 Sobic007G097100 Sobic007G097100 Sobic004G286200--Sobic007G097100 Sobic006G281900--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic006G281900--Sobic002G021200 Sobic009G188900 Sobic009G188900 Sobic006G281900--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic006G281900--Sobic001G290500 Sobic006G281900--Sobic001G199500 Sobic001G425700 Sobic001G425700 Sobic006G281900--Sobic001G425700 Sobic006G281900--Sobic009G225500 Sobic006G281900--Sobic007G187700 Sobic003G024000 Sobic003G024000 Sobic006G281900--Sobic003G024000 Sobic009G127800 Sobic009G127800 Sobic009G225500--Sobic009G127800 Sobic003G259300 Sobic003G259300 Sobic009G225500--Sobic003G259300 Sobic006G142500 Sobic006G142500 Sobic009G225500--Sobic006G142500 Sobic006G221300 Sobic006G221300 Sobic009G225500--Sobic006G221300 Sobic010G086000 Sobic010G086000 Sobic009G225500--Sobic010G086000 Sobic009G225500--Sobic001G425700 Sobic004G179800 Sobic004G179800 Sobic009G225500--Sobic004G179800 Sobic006G272800 Sobic006G272800 Sobic009G225500--Sobic006G272800 Sobic009G225500--Sobic006G281900 Sobic002G095300--Sobic002G187600 Sobic010G087100 Sobic010G087100 Sobic002G095300--Sobic010G087100 Sobic002G095300--Sobic002G021200 Sobic002G123600 Sobic002G123600 Sobic002G095300--Sobic002G123600 Sobic002G095300--Sobic007G187700 Sobic002G095300--Sobic008G118100 Sobic002G095300--Sobic008G090400 Sobic002G095300--Sobic002G168000 Sobic006G126800 Sobic006G126800 Sobic002G095300--Sobic006G126800 Sobic009G002200--Sobic007G050800 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic009G002200--Sobic006G135800 Sobic005G036200 Sobic005G036200 Sobic009G002200--Sobic005G036200 Sobic009G002200--Sobic005G153000 Sobic001G375800 Sobic001G375800 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901 Sobic008G090400--Sobic002G123600 Sobic008G090400--Sobic002G095300 Sobic008G090400--Sobic010G087100 Sobic008G090400--Sobic008G118100 Sobic006G127200 Sobic006G127200 Sobic008G090400--Sobic006G127200 Sobic008G090400--Sobic002G187600 Sobic003G331000 Sobic003G331000 Sobic008G090400--Sobic003G331000 Sobic001G242500 Sobic001G242500 Sobic008G090400--Sobic001G242500 Sobic004G306100 Sobic004G306100 Sobic008G090400--Sobic004G306100 Sobic009G143200 Sobic009G143200 Sobic005G157300--Sobic009G143200 Sobic003G055600 Sobic003G055600 Sobic005G157300--Sobic003G055600 Sobic003G183700 Sobic003G183700 Sobic005G157300--Sobic003G183700 Sobic001G377700 Sobic001G377700 Sobic005G157300--Sobic001G377700 Sobic001G054700 Sobic001G054700 Sobic005G157300--Sobic001G054700 Sobic005G157300--Sobic006G221300 Sobic005G157300--Sobic007G187700 Sobic009G172950 Sobic009G172950 Sobic005G157300--Sobic009G172950 Sobic005G157300--Sobic009G127800
Octagon: transcription factors


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