Gene annotation
Transcriptome id Sobic.002G187600.2,Sobic.002G187600.5,Sobic.002G187600.1
Synonym Sb02g023560, ATCTC1, CTC1
Functional annotation expressed protein
UniProt A0A1W0W4W8 , A0A1B6QCA2 , A0A1B6QC77
Pfam PF15491
Panther DB PTHR14865
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0000723; telomere maintenance


Orthologs (automatic annotation)
TAIR AT4G09680 : conserved telomere maintenance component 1
RAP-DB (Rice) LOC_Os09g20910.1 : expressed protein
MaizeGDB (Corn) Zm00025a046772
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
2 Sobic.008G118100 kelch repeat protein, putative, expressed -
3 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
4 Sobic.003G102700 exostosin family protein, putative, expressed -
5 Sobic.004G286200 DUF630/DUF632 domains containing protein, putative, expressed -
6 Sobic.008G090400 - -
7 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
8 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
9 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
10 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
11 Sobic.010G087100 MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed K10738: DNA helicase MCM9
12 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
13 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
14 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
15 Sobic.002G123600 expressed protein -
16 Sobic.002G168000 expressed protein -
17 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
18 Sobic.003G392100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptidase, putative, expressed K01392: thimet oligopeptidase
19 Sobic.005G153000 agenet domain containing protein, expressed -
20 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase


Gene co-expression network
sample Sobic002G187600 Sobic002G187600 Sobic002G095300 Sobic002G095300 Sobic002G187600--Sobic002G095300 Sobic008G118100 Sobic008G118100 Sobic002G187600--Sobic008G118100 Sobic007G050800 Sobic007G050800 Sobic002G187600--Sobic007G050800 Sobic003G102700 Sobic003G102700 Sobic002G187600--Sobic003G102700 Sobic004G286200 Sobic004G286200 Sobic002G187600--Sobic004G286200 Sobic008G090400 Sobic008G090400 Sobic002G187600--Sobic008G090400 Sobic007G187700 Sobic007G187700 Sobic002G187600--Sobic007G187700 Sobic001G199500 Sobic001G199500 Sobic002G187600--Sobic001G199500 Sobic003G290400 Sobic003G290400 Sobic002G187600--Sobic003G290400 Sobic002G095300--Sobic002G187600 Sobic010G087100 Sobic010G087100 Sobic002G095300--Sobic010G087100 Sobic002G021200 Sobic002G021200 Sobic002G095300--Sobic002G021200 Sobic002G123600 Sobic002G123600 Sobic002G095300--Sobic002G123600 Sobic002G095300--Sobic007G187700 Sobic002G095300--Sobic008G118100 Sobic002G095300--Sobic008G090400 Sobic002G168000 Sobic002G168000 Sobic002G095300--Sobic002G168000 Sobic006G126800 Sobic006G126800 Sobic002G095300--Sobic006G126800 Sobic008G118100--Sobic007G050800 Sobic008G118100--Sobic002G187600 Sobic008G118100--Sobic004G286200 Sobic006G281900 Sobic006G281900 Sobic008G118100--Sobic006G281900 Sobic009G225500 Sobic009G225500 Sobic008G118100--Sobic009G225500 Sobic008G118100--Sobic002G095300 Sobic009G002200 Sobic009G002200 Sobic008G118100--Sobic009G002200 Sobic008G118100--Sobic008G090400 Sobic005G157300 Sobic005G157300 Sobic008G118100--Sobic005G157300 Sobic007G050800--Sobic009G002200 Sobic006G016700 Sobic006G016700 Sobic007G050800--Sobic006G016700 Sobic007G050800--Sobic008G118100 Sobic006G226000 Sobic006G226000 Sobic007G050800--Sobic006G226000 Sobic007G050800--Sobic002G168000 Sobic005G153000 Sobic005G153000 Sobic007G050800--Sobic005G153000 Sobic006G135800 Sobic006G135800 Sobic007G050800--Sobic006G135800 Sobic007G050800--Sobic007G187700 Sobic009G012600 Sobic009G012600 Sobic007G050800--Sobic009G012600 Sobic003G102700--Sobic001G199500 Sobic005G102800 Sobic005G102800 Sobic003G102700--Sobic005G102800 Sobic006G084300 Sobic006G084300 Sobic003G102700--Sobic006G084300 Sobic003G102700--Sobic002G187600 Sobic003G102700--Sobic002G168000 Sobic003G102700--Sobic006G281900 Sobic003G024000 Sobic003G024000 Sobic003G102700--Sobic003G024000 Sobic009G188900 Sobic009G188900 Sobic003G102700--Sobic009G188900 Sobic002G367200 Sobic002G367200 Sobic003G102700--Sobic002G367200 Sobic004G286200--Sobic008G118100 Sobic004G286200--Sobic009G225500 Sobic009G224300 Sobic009G224300 Sobic004G286200--Sobic009G224300 Sobic001G493100 Sobic001G493100 Sobic004G286200--Sobic001G493100 Sobic004G286200--Sobic002G187600 Sobic004G286200--Sobic007G050800 Sobic004G286200--Sobic006G016700 Sobic004G286200--Sobic006G135800 Sobic007G097100 Sobic007G097100 Sobic004G286200--Sobic007G097100 Sobic008G090400--Sobic002G123600 Sobic008G090400--Sobic002G095300 Sobic008G090400--Sobic010G087100 Sobic008G090400--Sobic008G118100 Sobic006G127200 Sobic006G127200 Sobic008G090400--Sobic006G127200 Sobic008G090400--Sobic002G187600 Sobic003G331000 Sobic003G331000 Sobic008G090400--Sobic003G331000 Sobic001G242500 Sobic001G242500 Sobic008G090400--Sobic001G242500 Sobic004G306100 Sobic004G306100 Sobic008G090400--Sobic004G306100 Sobic007G187700--Sobic002G168000 Sobic007G187700--Sobic002G021200 Sobic007G187700--Sobic005G153000 Sobic001G104500 Sobic001G104500 Sobic007G187700--Sobic001G104500 Sobic001G377700 Sobic001G377700 Sobic007G187700--Sobic001G377700 Sobic006G275500 Sobic006G275500 Sobic007G187700--Sobic006G275500 Sobic004G317000 Sobic004G317000 Sobic007G187700--Sobic004G317000 Sobic004G282601 Sobic004G282601 Sobic007G187700--Sobic004G282601 Sobic009G077300 Sobic009G077300 Sobic007G187700--Sobic009G077300 Sobic005G088900 Sobic005G088900 Sobic001G199500--Sobic005G088900 Sobic001G199500--Sobic003G102700 Sobic001G199500--Sobic006G084300 Sobic001G199500--Sobic003G024000 Sobic001G199500--Sobic006G281900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000 Sobic003G290400--Sobic005G153000 Sobic003G290400--Sobic009G002200 Sobic003G290400--Sobic004G282601 Sobic003G290400--Sobic009G077300 Sobic006G221300 Sobic006G221300 Sobic003G290400--Sobic006G221300 Sobic002G027600 Sobic002G027600 Sobic003G290400--Sobic002G027600 Sobic003G290400--Sobic006G135800 Sobic007G162400 Sobic007G162400 Sobic003G290400--Sobic007G162400 Sobic003G259300 Sobic003G259300 Sobic003G290400--Sobic003G259300
Octagon: transcription factors


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