Gene annotation
Transcriptome id Sobic.010G087100.1,Sobic.010G087100.2
Synonym MCM9, Sb10g007540
Functional annotation MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed
UniProt A0A194YJ32 , A0A194YI19
Pfam PF00493
Panther DB PTHR11630 PTHR11630:SF48
NCBI CDD -
KEGG Orthology K10738; DNA helicase MCM9
Gene Ontology GO:0006260; DNA replication GO:0005524ATP binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G14050 : minichromosome maintenance 9
RAP-DB (Rice) LOC_Os06g11500.1 : MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed
MaizeGDB (Corn) Zm00025a042537
Brachypodium PNT76204 , KQK18973 , KQK18974
Barley -
Wheat TraesCS7B02G081900 , TraesCS7A02G176900 , TraesCS7A02G176900 , TraesCS7D02G178200 , TraesCS7D02G178200 , TraesCS7D02G178200
Populus -


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cDNA sequences
Sobic.010G087100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
2 Sobic.003G379900 plus-3 domain containing protein, putative, expressed -
3 Sobic.001G506300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
4 Sobic.002G131100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-rich protein, putative, expressed -
5 Sobic.008G090400 - -
6 Sobic.008G118100 kelch repeat protein, putative, expressed -
7 Sobic.002G238800 mago nashi, putative, expressed K12877: protein mago nashi
8 Sobic.008G160600 tesmin/TSO1-like CXC domain containing protein, expressed -
9 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
10 Sobic.006G081700 - -
11 Sobic.006G126800 expressed protein K10730: ATP-dependent DNA helicase Q4
12 Sobic.010G190800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1680 domain containing protein, putative, expressed K09955: uncharacterized protein
13 Sobic.002G187600 expressed protein -
14 Sobic.001G242500 - -
15 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
16 Sobic.002G286632 - -
17 Sobic.010G257500 expressed protein -
18 Sobic.005G036200 protein of unknown function containing protein, expressed -
19 Sobic.005G034200 OsFBX114 - F-box domain containing protein, expressed -
20 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic010G087100 Sobic010G087100 Sobic002G095300 Sobic002G095300 Sobic010G087100--Sobic002G095300 Sobic003G379900 Sobic003G379900 Sobic010G087100--Sobic003G379900 Sobic001G506300 Sobic001G506300 Sobic010G087100--Sobic001G506300 Sobic002G131100 Sobic002G131100 Sobic010G087100--Sobic002G131100 Sobic008G090400 Sobic008G090400 Sobic010G087100--Sobic008G090400 Sobic008G118100 Sobic008G118100 Sobic010G087100--Sobic008G118100 Sobic002G238800 Sobic002G238800 Sobic010G087100--Sobic002G238800 Sobic008G160600 Sobic008G160600 Sobic010G087100--Sobic008G160600 Sobic009G002200 Sobic009G002200 Sobic010G087100--Sobic009G002200 Sobic002G187600 Sobic002G187600 Sobic002G095300--Sobic002G187600 Sobic002G095300--Sobic010G087100 Sobic002G021200 Sobic002G021200 Sobic002G095300--Sobic002G021200 Sobic002G123600 Sobic002G123600 Sobic002G095300--Sobic002G123600 Sobic007G187700 Sobic007G187700 Sobic002G095300--Sobic007G187700 Sobic002G095300--Sobic008G118100 Sobic002G095300--Sobic008G090400 Sobic002G168000 Sobic002G168000 Sobic002G095300--Sobic002G168000 Sobic006G126800 Sobic006G126800 Sobic002G095300--Sobic006G126800 Sobic003G379900--Sobic002G238800 Sobic002G420400 Sobic002G420400 Sobic003G379900--Sobic002G420400 Sobic005G034200 Sobic005G034200 Sobic003G379900--Sobic005G034200 Sobic003G379900--Sobic010G087100 Sobic003G042200 Sobic003G042200 Sobic003G379900--Sobic003G042200 Sobic004G339900 Sobic004G339900 Sobic003G379900--Sobic004G339900 Sobic001G081800 Sobic001G081800 Sobic003G379900--Sobic001G081800 Sobic006G184200 Sobic006G184200 Sobic003G379900--Sobic006G184200 Sobic005G036200 Sobic005G036200 Sobic003G379900--Sobic005G036200 Sobic001G506300--Sobic010G087100 Sobic001G506300--Sobic002G238800 Sobic001G506300--Sobic002G131100 Sobic006G095300 Sobic006G095300 Sobic001G506300--Sobic006G095300 Sobic006G081700 Sobic006G081700 Sobic001G506300--Sobic006G081700 Sobic010G030000 Sobic010G030000 Sobic001G506300--Sobic010G030000 Sobic001G118800 Sobic001G118800 Sobic001G506300--Sobic001G118800 Sobic001G506300--Sobic003G379900 Sobic010G257500 Sobic010G257500 Sobic001G506300--Sobic010G257500 Sobic002G131100--Sobic010G087100 Sobic002G131100--Sobic001G506300 Sobic003G084200 Sobic003G084200 Sobic002G131100--Sobic003G084200 Sobic002G131100--Sobic001G118800 Sobic005G068800 Sobic005G068800 Sobic002G131100--Sobic005G068800 Sobic002G131100--Sobic007G187700 Sobic005G165800 Sobic005G165800 Sobic002G131100--Sobic005G165800 Sobic001G507000 Sobic001G507000 Sobic002G131100--Sobic001G507000 Sobic006G195500 Sobic006G195500 Sobic002G131100--Sobic006G195500 Sobic008G090400--Sobic002G123600 Sobic008G090400--Sobic002G095300 Sobic008G090400--Sobic010G087100 Sobic008G090400--Sobic008G118100 Sobic006G127200 Sobic006G127200 Sobic008G090400--Sobic006G127200 Sobic008G090400--Sobic002G187600 Sobic003G331000 Sobic003G331000 Sobic008G090400--Sobic003G331000 Sobic001G242500 Sobic001G242500 Sobic008G090400--Sobic001G242500 Sobic004G306100 Sobic004G306100 Sobic008G090400--Sobic004G306100 Sobic007G050800 Sobic007G050800 Sobic008G118100--Sobic007G050800 Sobic008G118100--Sobic002G187600 Sobic004G286200 Sobic004G286200 Sobic008G118100--Sobic004G286200 Sobic006G281900 Sobic006G281900 Sobic008G118100--Sobic006G281900 Sobic009G225500 Sobic009G225500 Sobic008G118100--Sobic009G225500 Sobic008G118100--Sobic002G095300 Sobic008G118100--Sobic009G002200 Sobic008G118100--Sobic008G090400 Sobic005G157300 Sobic005G157300 Sobic008G118100--Sobic005G157300 Sobic002G238800--Sobic003G379900 Sobic002G238800--Sobic001G081800 Sobic005G172700 Sobic005G172700 Sobic002G238800--Sobic005G172700 Sobic002G238800--Sobic001G506300 Sobic002G238800--Sobic003G042200 Sobic002G238800--Sobic010G087100 Sobic004G218000 Sobic004G218000 Sobic002G238800--Sobic004G218000 Sobic002G354800 Sobic002G354800 Sobic002G238800--Sobic002G354800 Sobic002G349000 Sobic002G349000 Sobic002G238800--Sobic002G349000 Sobic008G160600--Sobic006G184200 Sobic010G009600 Sobic010G009600 Sobic008G160600--Sobic010G009600 Sobic010G223500 Sobic010G223500 Sobic008G160600--Sobic010G223500 Sobic008G160600--Sobic010G257500 Sobic001G485500 Sobic001G485500 Sobic008G160600--Sobic001G485500 Sobic004G198300 Sobic004G198300 Sobic008G160600--Sobic004G198300 Sobic010G018900 Sobic010G018900 Sobic008G160600--Sobic010G018900 Sobic008G087200 Sobic008G087200 Sobic008G160600--Sobic008G087200 Sobic004G215200 Sobic004G215200 Sobic008G160600--Sobic004G215200 Sobic009G002200--Sobic007G050800 Sobic003G290400 Sobic003G290400 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic006G135800 Sobic006G135800 Sobic009G002200--Sobic006G135800 Sobic009G002200--Sobic005G036200 Sobic005G153000 Sobic005G153000 Sobic009G002200--Sobic005G153000 Sobic001G375800 Sobic001G375800 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901
Octagon: transcription factors


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