Gene annotation
Transcriptome id Sobic.002G131100.2,Sobic.002G131100.1,Sobic.002G131100.3,Sobic.002G131100.4
Synonym Sb02g011270
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
N-rich protein, putative, expressed
UniProt A0A1W0W3S4 , A0A1W0W3M8 , A0A1W0W3P7
Pfam PF10539
Panther DB PTHR10857 PTHR10857:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35140 : DCD (Development and Cell Death) domain protein
RAP-DB (Rice) LOC_Os09g39020.1 : N-rich protein, putative, expressed
MaizeGDB (Corn) Zm00025a045909
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G087100 MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed K10738: DNA helicase MCM9
2 Sobic.001G506300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
3 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G118800 homologous-pairing protein meu13, putative, expressed K06695: 26S proteasome regulatory subunit, ATPase 3, interacting protein
5 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
6 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
7 Sobic.005G165800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@SEY1, putative, expressed -
8 Sobic.001G507000 expressed protein -
9 Sobic.006G195500 DNA-binding protein, putative, expressed K10742: DNA replication ATP-dependent helicase Dna2
10 Sobic.005G207800 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
11 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
12 Sobic.008G090400 - -
13 Sobic.010G165800 - -
14 Sobic.002G158500 ankyrin, putative, expressed -
15 Sobic.005G157300 protein binding protein, putative, expressed -
16 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
17 Sobic.003G379900 plus-3 domain containing protein, putative, expressed -
18 Sobic.002G168000 expressed protein -
19 Sobic.009G222400 expressed protein -
20 Sobic.001G242500 - -


Gene co-expression network
sample Sobic002G131100 Sobic002G131100 Sobic010G087100 Sobic010G087100 Sobic002G131100--Sobic010G087100 Sobic001G506300 Sobic001G506300 Sobic002G131100--Sobic001G506300 Sobic003G084200 Sobic003G084200 Sobic002G131100--Sobic003G084200 Sobic001G118800 Sobic001G118800 Sobic002G131100--Sobic001G118800 Sobic005G068800 Sobic005G068800 Sobic002G131100--Sobic005G068800 Sobic007G187700 Sobic007G187700 Sobic002G131100--Sobic007G187700 Sobic005G165800 Sobic005G165800 Sobic002G131100--Sobic005G165800 Sobic001G507000 Sobic001G507000 Sobic002G131100--Sobic001G507000 Sobic006G195500 Sobic006G195500 Sobic002G131100--Sobic006G195500 Sobic002G095300 Sobic002G095300 Sobic010G087100--Sobic002G095300 Sobic003G379900 Sobic003G379900 Sobic010G087100--Sobic003G379900 Sobic010G087100--Sobic001G506300 Sobic010G087100--Sobic002G131100 Sobic008G090400 Sobic008G090400 Sobic010G087100--Sobic008G090400 Sobic008G118100 Sobic008G118100 Sobic010G087100--Sobic008G118100 Sobic002G238800 Sobic002G238800 Sobic010G087100--Sobic002G238800 Sobic008G160600 Sobic008G160600 Sobic010G087100--Sobic008G160600 Sobic009G002200 Sobic009G002200 Sobic010G087100--Sobic009G002200 Sobic001G506300--Sobic010G087100 Sobic001G506300--Sobic002G238800 Sobic001G506300--Sobic002G131100 Sobic006G095300 Sobic006G095300 Sobic001G506300--Sobic006G095300 Sobic006G081700 Sobic006G081700 Sobic001G506300--Sobic006G081700 Sobic010G030000 Sobic010G030000 Sobic001G506300--Sobic010G030000 Sobic001G506300--Sobic001G118800 Sobic001G506300--Sobic003G379900 Sobic010G257500 Sobic010G257500 Sobic001G506300--Sobic010G257500 Sobic001G104500 Sobic001G104500 Sobic003G084200--Sobic001G104500 Sobic007G050800 Sobic007G050800 Sobic003G084200--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic003G084200--Sobic006G275500 Sobic005G157300 Sobic005G157300 Sobic003G084200--Sobic005G157300 Sobic002G168000 Sobic002G168000 Sobic003G084200--Sobic002G168000 Sobic003G084200--Sobic007G187700 Sobic003G244000 Sobic003G244000 Sobic003G084200--Sobic003G244000 Sobic003G084200--Sobic009G002200 Sobic001G456400 Sobic001G456400 Sobic003G084200--Sobic001G456400 Sobic007G121650 Sobic007G121650 Sobic001G118800--Sobic007G121650 Sobic001G238900 Sobic001G238900 Sobic001G118800--Sobic001G238900 Sobic003G055600 Sobic003G055600 Sobic001G118800--Sobic003G055600 Sobic001G118800--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic001G118800--Sobic002G190000 Sobic004G190500 Sobic004G190500 Sobic001G118800--Sobic004G190500 Sobic003G204200 Sobic003G204200 Sobic001G118800--Sobic003G204200 Sobic004G317000 Sobic004G317000 Sobic001G118800--Sobic004G317000 Sobic007G121600 Sobic007G121600 Sobic001G118800--Sobic007G121600 Sobic005G068800--Sobic001G507000 Sobic004G156200 Sobic004G156200 Sobic005G068800--Sobic004G156200 Sobic004G095200 Sobic004G095200 Sobic005G068800--Sobic004G095200 Sobic006G120600 Sobic006G120600 Sobic005G068800--Sobic006G120600 Sobic009G146250 Sobic009G146250 Sobic005G068800--Sobic009G146250 Sobic005G068800--Sobic006G195500 Sobic003G183700 Sobic003G183700 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic009G052100 Sobic009G052100 Sobic005G068800--Sobic009G052100 Sobic007G187700--Sobic002G168000 Sobic007G187700--Sobic002G021200 Sobic005G153000 Sobic005G153000 Sobic007G187700--Sobic005G153000 Sobic007G187700--Sobic001G104500 Sobic001G377700 Sobic001G377700 Sobic007G187700--Sobic001G377700 Sobic007G187700--Sobic006G275500 Sobic007G187700--Sobic004G317000 Sobic004G282601 Sobic004G282601 Sobic007G187700--Sobic004G282601 Sobic009G077300 Sobic009G077300 Sobic007G187700--Sobic009G077300 Sobic001G396900 Sobic001G396900 Sobic005G165800--Sobic001G396900 Sobic004G114600 Sobic004G114600 Sobic005G165800--Sobic004G114600 Sobic006G208000 Sobic006G208000 Sobic005G165800--Sobic006G208000 Sobic006G034300 Sobic006G034300 Sobic005G165800--Sobic006G034300 Sobic002G413200 Sobic002G413200 Sobic005G165800--Sobic002G413200 Sobic004G281700 Sobic004G281700 Sobic005G165800--Sobic004G281700 Sobic001G044300 Sobic001G044300 Sobic005G165800--Sobic001G044300 Sobic003G419500 Sobic003G419500 Sobic005G165800--Sobic003G419500 Sobic010G131500 Sobic010G131500 Sobic005G165800--Sobic010G131500 Sobic001G507000--Sobic005G068800 Sobic004G321400 Sobic004G321400 Sobic001G507000--Sobic004G321400 Sobic001G507000--Sobic003G183700 Sobic001G146900 Sobic001G146900 Sobic001G507000--Sobic001G146900 Sobic001G507000--Sobic006G120600 Sobic001G507000--Sobic004G156200 Sobic001G507000--Sobic006G195500 Sobic001G507000--Sobic004G095200 Sobic009G087000 Sobic009G087000 Sobic001G507000--Sobic009G087000 Sobic006G051000 Sobic006G051000 Sobic006G195500--Sobic006G051000 Sobic006G195500--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic006G195500--Sobic010G103700 Sobic006G195500--Sobic001G377700 Sobic006G195500--Sobic009G087000 Sobic006G195500--Sobic006G120600 Sobic006G196600 Sobic006G196600 Sobic006G195500--Sobic006G196600 Sobic005G110535 Sobic005G110535 Sobic006G195500--Sobic005G110535 Sobic003G179500 Sobic003G179500 Sobic006G195500--Sobic003G179500
Octagon: transcription factors


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