Gene annotation
Transcriptome id Sobic.005G165800.1
Synonym Sb05g022650
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
SEY1, putative, expressed
UniProt A0A1Z5RJJ8
Pfam PF05879
Panther DB PTHR11649 PTHR11649:SF69
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45160 : Root hair defective 3 GTP-binding protein (RHD3)
RAP-DB (Rice) LOC_Os11g37260.1 : SEY1, putative, expressed
MaizeGDB (Corn) Zm00025a033899
Brachypodium KQJ88080
Barley -
Wheat TraesCS6B02G254500
Populus PNT55596 , PNT55597 , PNT55595


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G396900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
2 Sobic.004G114600 expressed protein -
3 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
4 Sobic.006G034300 Transketolase(PubMedID : 26186930)@"Transketolase, putative (Os)"(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
5 Sobic.002G413200 glucosyltransferase, putative, expressed -
6 Sobic.004G281700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DUF1264 domain containing protein, putative, expressed -
7 Sobic.001G044300 transcription factor, putative, expressed K09060: plant G-box-binding factor
8 Sobic.003G419500 xylanase inhibitor, putative, expressed -
9 Sobic.010G131500 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
10 Sobic.009G250500 expressed protein -
11 Sobic.003G283700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1264 domain containing protein, putative, expressed -
12 Sobic.009G025500 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed -
13 Sobic.003G437400 The major cationic peroxidase in sorghum grain (SPC4)(PubMedID : 16650004)@peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.003G098800 osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
15 Sobic.002G010000 NLI interacting factor-like phosphatase, putative, expressed -
16 Sobic.003G236200 oleosin, putative, expressed -
17 Sobic.002G391100 Thioredoxin peroxidase (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed K11188: peroxiredoxin 6
18 Sobic.004G301800 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
19 Sobic.003G144500 Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
20 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic005G165800 Sobic005G165800 Sobic001G396900 Sobic001G396900 Sobic005G165800--Sobic001G396900 Sobic004G114600 Sobic004G114600 Sobic005G165800--Sobic004G114600 Sobic006G208000 Sobic006G208000 Sobic005G165800--Sobic006G208000 Sobic006G034300 Sobic006G034300 Sobic005G165800--Sobic006G034300 Sobic002G413200 Sobic002G413200 Sobic005G165800--Sobic002G413200 Sobic004G281700 Sobic004G281700 Sobic005G165800--Sobic004G281700 Sobic001G044300 Sobic001G044300 Sobic005G165800--Sobic001G044300 Sobic003G419500 Sobic003G419500 Sobic005G165800--Sobic003G419500 Sobic010G131500 Sobic010G131500 Sobic005G165800--Sobic010G131500 Sobic005G138500 Sobic005G138500 Sobic001G396900--Sobic005G138500 Sobic001G396900--Sobic004G114600 Sobic001G396900--Sobic006G034300 Sobic001G396900--Sobic005G165800 Sobic009G171400 Sobic009G171400 Sobic001G396900--Sobic009G171400 Sobic001G396900--Sobic002G413200 Sobic003G011000 Sobic003G011000 Sobic001G396900--Sobic003G011000 Sobic006G050600 Sobic006G050600 Sobic001G396900--Sobic006G050600 Sobic007G153600 Sobic007G153600 Sobic001G396900--Sobic007G153600 Sobic004G114600--Sobic002G413200 Sobic004G114600--Sobic001G396900 Sobic004G114600--Sobic006G208000 Sobic004G114600--Sobic009G171400 Sobic004G114600--Sobic006G034300 Sobic002G062100 Sobic002G062100 Sobic004G114600--Sobic002G062100 Sobic009G025500 Sobic009G025500 Sobic004G114600--Sobic009G025500 Sobic004G114600--Sobic006G050600 Sobic004G114600--Sobic005G165800 Sobic006G208000--Sobic009G025500 Sobic001G004600 Sobic001G004600 Sobic006G208000--Sobic001G004600 Sobic001G534200 Sobic001G534200 Sobic006G208000--Sobic001G534200 Sobic010G198900 Sobic010G198900 Sobic006G208000--Sobic010G198900 Sobic005G021000 Sobic005G021000 Sobic006G208000--Sobic005G021000 Sobic009G246250 Sobic009G246250 Sobic006G208000--Sobic009G246250 Sobic008G149300 Sobic008G149300 Sobic006G208000--Sobic008G149300 Sobic006G167700 Sobic006G167700 Sobic006G208000--Sobic006G167700 Sobic009G103800 Sobic009G103800 Sobic006G208000--Sobic009G103800 Sobic006G034300--Sobic003G011000 Sobic006G034300--Sobic001G396900 Sobic006G034300--Sobic004G114600 Sobic006G034300--Sobic005G165800 Sobic006G034300--Sobic009G171400 Sobic006G034300--Sobic005G138500 Sobic006G034300--Sobic002G413200 Sobic006G034300--Sobic006G050600 Sobic006G034300--Sobic006G208000 Sobic002G413200--Sobic007G153600 Sobic002G413200--Sobic004G114600 Sobic002G143300 Sobic002G143300 Sobic002G413200--Sobic002G143300 Sobic002G413200--Sobic002G062100 Sobic010G133000 Sobic010G133000 Sobic002G413200--Sobic010G133000 Sobic002G413200--Sobic006G208000 Sobic002G413200--Sobic009G025500 Sobic002G413200--Sobic001G044300 Sobic010G007800 Sobic010G007800 Sobic002G413200--Sobic010G007800 Sobic004G301800 Sobic004G301800 Sobic004G281700--Sobic004G301800 Sobic003G283700 Sobic003G283700 Sobic004G281700--Sobic003G283700 Sobic003G295600 Sobic003G295600 Sobic004G281700--Sobic003G295600 Sobic010G142900 Sobic010G142900 Sobic004G281700--Sobic010G142900 Sobic001G380800 Sobic001G380800 Sobic004G281700--Sobic001G380800 Sobic001G418500 Sobic001G418500 Sobic004G281700--Sobic001G418500 Sobic003G236200 Sobic003G236200 Sobic004G281700--Sobic003G236200 Sobic003G144500 Sobic003G144500 Sobic004G281700--Sobic003G144500 Sobic001G544400 Sobic001G544400 Sobic004G281700--Sobic001G544400 Sobic009G037100 Sobic009G037100 Sobic001G044300--Sobic009G037100 Sobic001G044300--Sobic009G025500 Sobic005G165700 Sobic005G165700 Sobic001G044300--Sobic005G165700 Sobic004G164800 Sobic004G164800 Sobic001G044300--Sobic004G164800 Sobic001G044300--Sobic010G198900 Sobic003G372600 Sobic003G372600 Sobic001G044300--Sobic003G372600 Sobic001G044300--Sobic003G144500 Sobic001G498900 Sobic001G498900 Sobic001G044300--Sobic001G498900 Sobic010G125000 Sobic010G125000 Sobic001G044300--Sobic010G125000 Sobic009G208600 Sobic009G208600 Sobic003G419500--Sobic009G208600 Sobic009G250500 Sobic009G250500 Sobic003G419500--Sobic009G250500 Sobic002G232900 Sobic002G232900 Sobic003G419500--Sobic002G232900 Sobic003G419500--Sobic010G131500 Sobic003G419500--Sobic005G021000 Sobic003G398200 Sobic003G398200 Sobic003G419500--Sobic003G398200 Sobic003G437400 Sobic003G437400 Sobic003G419500--Sobic003G437400 Sobic003G419500--Sobic009G025500 Sobic006G013300 Sobic006G013300 Sobic003G419500--Sobic006G013300 Sobic010G131500--Sobic003G437400 Sobic003G098800 Sobic003G098800 Sobic010G131500--Sobic003G098800 Sobic010G131500--Sobic009G250500 Sobic003G051400 Sobic003G051400 Sobic010G131500--Sobic003G051400 Sobic001G058800 Sobic001G058800 Sobic010G131500--Sobic001G058800 Sobic010G131500--Sobic001G380800 Sobic010G131500--Sobic003G398200 Sobic006G248100 Sobic006G248100 Sobic010G131500--Sobic006G248100 Sobic010G131500--Sobic004G301800
Octagon: transcription factors


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