Gene annotation
Transcriptome id Sobic.001G396900.1,Sobic.001G396900.2
Synonym Sb01g037560, ATOEP16-2, ATOEP16-S
Functional annotation expressed high in CK60 (an inefficient nitrogen user) (PubMedID : 28697783)
Up-reguralion under drought (PubMedID : 24916767)
Up-reguralion under drought (PubMedID : 24916767)
mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
UniProt A0A1B6QNQ2 , A0A1B6QNP6
Pfam PF02466
Panther DB PTHR15371 PTHR15371:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16160 : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
RAP-DB (Rice) LOC_Os03g19290.1 : mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
MaizeGDB (Corn) Zm00025a002119
Brachypodium -
Barley HORVU4Hr1G054110.1
Wheat TraesCS4D02G186100 , TraesCS4D02G186100 , TraesCS4B02G184800 , TraesCS4B02G184800
Populus -


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cDNA sequences
Sobic.001G396900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G138500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G114600 expressed protein -
3 Sobic.006G034300 Transketolase(PubMedID : 26186930)@"Transketolase, putative (Os)"(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
4 Sobic.005G165800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@SEY1, putative, expressed -
5 Sobic.009G171400 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.002G413200 glucosyltransferase, putative, expressed -
7 Sobic.003G011000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@AAA-type ATPase family protein, putative, expressed -
8 Sobic.006G050600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.007G153600 similar to Protein HVA22(PubMedID : 29862293)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
10 Sobic.004G243300 expressed protein -
11 Sobic.006G269501 - -
12 Sobic.004G281700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DUF1264 domain containing protein, putative, expressed -
13 Sobic.001G044300 transcription factor, putative, expressed K09060: plant G-box-binding factor
14 Sobic.003G419500 xylanase inhibitor, putative, expressed -
15 Sobic.002G143300 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
16 Sobic.010G024600 aminomethyltransferase, putative, expressed K06980: tRNA-modifying protein YgfZ
17 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
18 Sobic.010G101300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
19 Sobic.010G133000 late embryogenesis abundant group 1, putative, expressed -
20 Sobic.006G114700 Up-reguralion under drought(PubMedID : 24916767)@phosphofructokinase 2("PubMedID : 26759170,PubMedID : 24597475")@phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1


Gene co-expression network
sample Sobic001G396900 Sobic001G396900 Sobic005G138500 Sobic005G138500 Sobic001G396900--Sobic005G138500 Sobic004G114600 Sobic004G114600 Sobic001G396900--Sobic004G114600 Sobic006G034300 Sobic006G034300 Sobic001G396900--Sobic006G034300 Sobic005G165800 Sobic005G165800 Sobic001G396900--Sobic005G165800 Sobic009G171400 Sobic009G171400 Sobic001G396900--Sobic009G171400 Sobic002G413200 Sobic002G413200 Sobic001G396900--Sobic002G413200 Sobic003G011000 Sobic003G011000 Sobic001G396900--Sobic003G011000 Sobic006G050600 Sobic006G050600 Sobic001G396900--Sobic006G050600 Sobic007G153600 Sobic007G153600 Sobic001G396900--Sobic007G153600 Sobic006G269501 Sobic006G269501 Sobic005G138500--Sobic006G269501 Sobic005G138500--Sobic001G396900 Sobic005G138500--Sobic009G171400 Sobic005G138500--Sobic002G413200 Sobic005G138500--Sobic004G114600 Sobic005G138500--Sobic006G050600 Sobic002G143300 Sobic002G143300 Sobic005G138500--Sobic002G143300 Sobic005G138500--Sobic006G034300 Sobic004G243300 Sobic004G243300 Sobic005G138500--Sobic004G243300 Sobic004G114600--Sobic002G413200 Sobic004G114600--Sobic001G396900 Sobic006G208000 Sobic006G208000 Sobic004G114600--Sobic006G208000 Sobic004G114600--Sobic009G171400 Sobic004G114600--Sobic006G034300 Sobic002G062100 Sobic002G062100 Sobic004G114600--Sobic002G062100 Sobic009G025500 Sobic009G025500 Sobic004G114600--Sobic009G025500 Sobic004G114600--Sobic006G050600 Sobic004G114600--Sobic005G165800 Sobic006G034300--Sobic003G011000 Sobic006G034300--Sobic001G396900 Sobic006G034300--Sobic004G114600 Sobic006G034300--Sobic005G165800 Sobic006G034300--Sobic009G171400 Sobic006G034300--Sobic005G138500 Sobic006G034300--Sobic002G413200 Sobic006G034300--Sobic006G050600 Sobic006G034300--Sobic006G208000 Sobic005G165800--Sobic001G396900 Sobic005G165800--Sobic004G114600 Sobic005G165800--Sobic006G208000 Sobic005G165800--Sobic006G034300 Sobic005G165800--Sobic002G413200 Sobic004G281700 Sobic004G281700 Sobic005G165800--Sobic004G281700 Sobic001G044300 Sobic001G044300 Sobic005G165800--Sobic001G044300 Sobic003G419500 Sobic003G419500 Sobic005G165800--Sobic003G419500 Sobic010G131500 Sobic010G131500 Sobic005G165800--Sobic010G131500 Sobic010G101300 Sobic010G101300 Sobic009G171400--Sobic010G101300 Sobic009G171400--Sobic004G114600 Sobic009G171400--Sobic005G138500 Sobic009G171400--Sobic001G396900 Sobic003G292400 Sobic003G292400 Sobic009G171400--Sobic003G292400 Sobic009G171400--Sobic004G243300 Sobic009G171400--Sobic006G034300 Sobic006G114700 Sobic006G114700 Sobic009G171400--Sobic006G114700 Sobic009G171400--Sobic003G011000 Sobic002G413200--Sobic007G153600 Sobic002G413200--Sobic004G114600 Sobic002G413200--Sobic002G143300 Sobic002G413200--Sobic002G062100 Sobic010G133000 Sobic010G133000 Sobic002G413200--Sobic010G133000 Sobic002G413200--Sobic006G208000 Sobic002G413200--Sobic009G025500 Sobic002G413200--Sobic001G044300 Sobic010G007800 Sobic010G007800 Sobic002G413200--Sobic010G007800 Sobic003G011000--Sobic006G034300 Sobic003G011000--Sobic009G171400 Sobic003G011000--Sobic004G114600 Sobic003G011000--Sobic005G138500 Sobic003G011000--Sobic001G396900 Sobic003G011000--Sobic005G165800 Sobic004G058600 Sobic004G058600 Sobic003G011000--Sobic004G058600 Sobic003G011000--Sobic003G292400 Sobic003G011000--Sobic010G101300 Sobic006G050600--Sobic004G114600 Sobic006G050600--Sobic005G138500 Sobic006G050600--Sobic009G171400 Sobic006G050600--Sobic002G413200 Sobic006G050600--Sobic001G396900 Sobic006G050600--Sobic006G034300 Sobic006G050600--Sobic002G143300 Sobic006G050600--Sobic003G011000 Sobic006G050600--Sobic006G269501 Sobic007G153600--Sobic002G413200 Sobic007G153600--Sobic010G007800 Sobic003G130400 Sobic003G130400 Sobic007G153600--Sobic003G130400 Sobic003G144500 Sobic003G144500 Sobic007G153600--Sobic003G144500 Sobic007G153600--Sobic010G133000 Sobic010G041900 Sobic010G041900 Sobic007G153600--Sobic010G041900 Sobic007G153600--Sobic002G062100 Sobic007G153600--Sobic002G143300 Sobic003G395000 Sobic003G395000 Sobic007G153600--Sobic003G395000
Octagon: transcription factors


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