Gene annotation
| Transcriptome id | Sobic.007G153600.2,Sobic.007G153600.1 |
|---|---|
| Synonym | ATHVA22E, Sb07g022730, HVA22E |
| Functional annotation | similar to Protein HVA22 (PubMedID : 29862293) HVA22, putative, expressed |
| UniProt | C5YM75 , A0A1Z5RAM3 |
| Pfam | PF03134 |
| Panther DB | PTHR12300 PTHR12300:SF58 |
| NCBI CDD | - |
| KEGG Orthology | K17279; receptor expression-enhancing protein 5/6 |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G50720 : HVA22 homologue E |
|---|---|
| RAP-DB (Rice) | LOC_Os08g36440.1 : HVA22, putative, expressed |
| MaizeGDB (Corn) | Zm00025a005404 |
| Brachypodium | KQJ98595 |
| Barley | HORVU7Hr1G045630.9 , HORVU7Hr1G045630.8 , HORVU7Hr1G045630.5 , HORVU7Hr1G045630.4 , HORVU7Hr1G045630.7 , HORVU7Hr1G045630.6 , HORVU7Hr1G045630.1 , HORVU7Hr1G045630.3 , HORVU7Hr1G045630.2 , HORVU7Hr1G045630.11 , HORVU7Hr1G045630.10 , HORVU7Hr1G045630.12 |
| Wheat | TraesCS7D02G224100 , TraesCS7D02G224100 , TraesCS7A02G222500 , TraesCS7B02G129000 , TraesCS7B02G129000 , TraesCS7A02G222500 |
| Populus | - |
JBrowse
| Sobic.007G153600 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G413200 | glucosyltransferase, putative, expressed | - |
| 2 | Sobic.010G007800 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant group 1, putative, expressed | - |
| 3 | Sobic.003G130400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed | - |
| 4 | Sobic.003G144500 | Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed | - |
| 5 | Sobic.010G133000 | late embryogenesis abundant group 1, putative, expressed | - |
| 6 | Sobic.010G041900 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dehydrin, putative, expressed | - |
| 7 | Sobic.002G062100 | exostosin family protein, putative, expressed | - |
| 8 | Sobic.002G143300 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 9 | Sobic.003G395000 | cysteine proteinase EP-B 1 precursor, putative, expressed | - |
| 10 | Sobic.003G399500 | OsFBX59 - F-box domain containing protein, expressed | - |
| 11 | Sobic.004G281700 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DUF1264 domain containing protein, putative, expressed | - |
| 12 | Sobic.009G104500 | small hydrophilic plant seed protein, putative, expressed | - |
| 13 | Sobic.005G165700 | AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed | - |
| 14 | Sobic.001G044300 | transcription factor, putative, expressed | K09060: plant G-box-binding factor |
| 15 | Sobic.001G126900 | oleosin, putative, expressed | - |
| 16 | Sobic.002G401400 | glyoxalase family protein, putative, expressed | - |
| 17 | Sobic.009G037100 | oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed | - |
| 18 | Sobic.001G418500 | glyoxalase family protein, putative, expressed | - |
| 19 | Sobic.001G544400 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@oleosin, putative, expressed | - |
| 20 | Sobic.010G142900 | oleosin, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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