Gene annotation
| Transcriptome id | Sobic.002G413200.3,Sobic.002G413200.1 |
|---|---|
| Synonym | Sb02g042580 |
| Functional annotation | glucosyltransferase, putative, expressed |
| UniProt | C5X4Z0 |
| Pfam | PF00201 |
| Panther DB | PTHR11926 PTHR11926:SF205 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process |
Orthologs (automatic annotation)
| TAIR | AT5G49690 : UDP-Glycosyltransferase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os07g47550.1 : glucosyltransferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a015411 , Zm00025a049126 |
| Brachypodium | KQK14698 |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.002G413200 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G153600 | similar to Protein HVA22(PubMedID : 29862293)@HVA22, putative, expressed | K17279: receptor expression-enhancing protein 5/6 |
| 2 | Sobic.004G114600 | expressed protein | - |
| 3 | Sobic.002G143300 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 4 | Sobic.002G062100 | exostosin family protein, putative, expressed | - |
| 5 | Sobic.010G133000 | late embryogenesis abundant group 1, putative, expressed | - |
| 6 | Sobic.006G208000 | DNA repair ATPase-related, putative, expressed | - |
| 7 | Sobic.009G025500 | OsRCI2-7 - Putative low temperature and salt responsive protein, expressed | - |
| 8 | Sobic.001G044300 | transcription factor, putative, expressed | K09060: plant G-box-binding factor |
| 9 | Sobic.010G007800 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant group 1, putative, expressed | - |
| 10 | Sobic.003G144500 | Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed | - |
| 11 | Sobic.003G130400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed | - |
| 12 | Sobic.004G281700 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DUF1264 domain containing protein, putative, expressed | - |
| 13 | Sobic.005G165700 | AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed | - |
| 14 | Sobic.009G037100 | oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed | - |
| 15 | Sobic.001G004600 | expressed protein | - |
| 16 | Sobic.004G164800 | poly synthetase 3, putative, expressed | K10798: poly [ADP-ribose] polymerase 2/3/4 |
| 17 | Sobic.009G104500 | small hydrophilic plant seed protein, putative, expressed | - |
| 18 | Sobic.005G138500 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 19 | Sobic.001G396900 | expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed | - |
| 20 | Sobic.007G218500 | (50.9% identity with SbCCoAOMT/68.5% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed | K18883: tricin synthase |
Gene co-expression network
Octagon: transcription factors
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