Gene annotation
Transcriptome id Sobic.001G044300.10,Sobic.001G044300.11,Sobic.001G044300.9,Sobic.001G044300.8,Sobic.001G044300.7
Synonym Sb01g004080, GBF1
Functional annotation transcription factor, putative, expressed
UniProt A0A1Z5S4B9 , A0A1Z5S4D6 , A0A1Z5S4N6 , A0A1Z5S4A4 , A0A1Z5S4T2
Pfam PF00170
Panther DB PTHR22952 PTHR22952:SF155
NCBI CDD -
KEGG Orthology K09060; plant G-box-binding factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G35530 : basic region/leucine zipper transcription factor 68,basic region/leucine zipper transcription factor 16
RAP-DB (Rice) LOC_Os07g10890.1 : transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a008697
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
2 Sobic.009G025500 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed -
3 Sobic.005G165700 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed -
4 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
5 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
6 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
7 Sobic.003G144500 Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
8 Sobic.001G498900 expressed protein -
9 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
10 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
11 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
12 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
13 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
14 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
15 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -
16 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
17 Sobic.002G062100 exostosin family protein, putative, expressed -
18 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
19 Sobic.004G281700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DUF1264 domain containing protein, putative, expressed -
20 Sobic.008G159000 - -


Gene co-expression network
sample Sobic001G044300 Sobic001G044300 Sobic009G037100 Sobic009G037100 Sobic001G044300--Sobic009G037100 Sobic009G025500 Sobic009G025500 Sobic001G044300--Sobic009G025500 Sobic005G165700 Sobic005G165700 Sobic001G044300--Sobic005G165700 Sobic004G164800 Sobic004G164800 Sobic001G044300--Sobic004G164800 Sobic010G198900 Sobic010G198900 Sobic001G044300--Sobic010G198900 Sobic003G372600 Sobic003G372600 Sobic001G044300--Sobic003G372600 Sobic003G144500 Sobic003G144500 Sobic001G044300--Sobic003G144500 Sobic001G498900 Sobic001G498900 Sobic001G044300--Sobic001G498900 Sobic010G125000 Sobic010G125000 Sobic001G044300--Sobic010G125000 Sobic009G037100--Sobic004G164800 Sobic009G037100--Sobic003G372600 Sobic008G159000 Sobic008G159000 Sobic009G037100--Sobic008G159000 Sobic001G208500 Sobic001G208500 Sobic009G037100--Sobic001G208500 Sobic002G211300 Sobic002G211300 Sobic009G037100--Sobic002G211300 Sobic002G393100 Sobic002G393100 Sobic009G037100--Sobic002G393100 Sobic009G037100--Sobic010G125000 Sobic009G037100--Sobic005G165700 Sobic002G197700 Sobic002G197700 Sobic009G037100--Sobic002G197700 Sobic009G025500--Sobic010G198900 Sobic006G167700 Sobic006G167700 Sobic009G025500--Sobic006G167700 Sobic002G184700 Sobic002G184700 Sobic009G025500--Sobic002G184700 Sobic009G025500--Sobic002G211300 Sobic009G025500--Sobic010G125000 Sobic001G344300 Sobic001G344300 Sobic009G025500--Sobic001G344300 Sobic001G166900 Sobic001G166900 Sobic009G025500--Sobic001G166900 Sobic009G025500--Sobic003G372600 Sobic001G534200 Sobic001G534200 Sobic009G025500--Sobic001G534200 Sobic005G165700--Sobic001G498900 Sobic005G165700--Sobic009G037100 Sobic001G058800 Sobic001G058800 Sobic005G165700--Sobic001G058800 Sobic002G046000 Sobic002G046000 Sobic005G165700--Sobic002G046000 Sobic005G165700--Sobic004G164800 Sobic006G248000 Sobic006G248000 Sobic005G165700--Sobic006G248000 Sobic005G165700--Sobic003G372600 Sobic005G165700--Sobic003G144500 Sobic005G165700--Sobic010G198900 Sobic004G164800--Sobic009G037100 Sobic004G164800--Sobic002G393100 Sobic004G164800--Sobic001G208500 Sobic004G164800--Sobic003G372600 Sobic004G164800--Sobic002G211300 Sobic004G164800--Sobic008G159000 Sobic004G164800--Sobic002G197700 Sobic004G164800--Sobic010G125000 Sobic006G248100 Sobic006G248100 Sobic004G164800--Sobic006G248100 Sobic010G198900--Sobic006G248000 Sobic010G198900--Sobic003G372600 Sobic010G198900--Sobic006G167700 Sobic010G198900--Sobic001G166900 Sobic010G198900--Sobic002G211300 Sobic010G198900--Sobic002G046000 Sobic010G198900--Sobic002G184700 Sobic010G198900--Sobic010G125000 Sobic009G103800 Sobic009G103800 Sobic010G198900--Sobic009G103800 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic003G372600--Sobic002G184700 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic003G372600--Sobic006G167700 Sobic003G372600--Sobic009G037100 Sobic002G401400 Sobic002G401400 Sobic003G144500--Sobic002G401400 Sobic001G126900 Sobic001G126900 Sobic003G144500--Sobic001G126900 Sobic001G418500 Sobic001G418500 Sobic003G144500--Sobic001G418500 Sobic010G142900 Sobic010G142900 Sobic003G144500--Sobic010G142900 Sobic003G144500--Sobic009G037100 Sobic001G380800 Sobic001G380800 Sobic003G144500--Sobic001G380800 Sobic010G269950 Sobic010G269950 Sobic003G144500--Sobic010G269950 Sobic003G144500--Sobic004G164800 Sobic003G395000 Sobic003G395000 Sobic003G144500--Sobic003G395000 Sobic001G498900--Sobic006G248000 Sobic001G498900--Sobic005G165700 Sobic001G498900--Sobic010G198900 Sobic001G498900--Sobic002G211300 Sobic001G498900--Sobic009G037100 Sobic001G498900--Sobic010G125000 Sobic001G498900--Sobic003G372600 Sobic001G498900--Sobic002G046000 Sobic007G008500 Sobic007G008500 Sobic001G498900--Sobic007G008500 Sobic010G125000--Sobic002G211300 Sobic001G165600 Sobic001G165600 Sobic010G125000--Sobic001G165600 Sobic010G125000--Sobic006G248000 Sobic010G125000--Sobic003G372600 Sobic010G125000--Sobic006G167700 Sobic010G125000--Sobic002G197700 Sobic010G125000--Sobic008G159000 Sobic010G125000--Sobic001G166900 Sobic010G125000--Sobic004G164800
Octagon: transcription factors


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