Gene annotation
Transcriptome id Sobic.006G050600.1
Synonym Sb06g013760
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5RD25
Pfam -
Panther DB PTHR33829 PTHR33829:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27990 : -
RAP-DB (Rice) LOC_Os04g31710.1 : expressed protein
MaizeGDB (Corn) Zm00025a055892
Brachypodium KQJ82265
Barley HORVU2Hr1G069710.5 , HORVU2Hr1G069710.4 , HORVU2Hr1G069710.1 , HORVU2Hr1G069710.3 , HORVU2Hr1G069710.2
Wheat TraesCS2A02G283000 , TraesCS2D02G281700 , TraesCS2B02G300300
Populus -


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cDNA sequences
Sobic.006G050600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G114600 expressed protein -
2 Sobic.005G138500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.009G171400 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.002G413200 glucosyltransferase, putative, expressed -
5 Sobic.001G396900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
6 Sobic.006G034300 Transketolase(PubMedID : 26186930)@"Transketolase, putative (Os)"(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
7 Sobic.002G143300 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
8 Sobic.003G011000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@AAA-type ATPase family protein, putative, expressed -
9 Sobic.006G269501 - -
10 Sobic.005G165800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@SEY1, putative, expressed -
11 Sobic.002G062100 exostosin family protein, putative, expressed -
12 Sobic.007G153600 similar to Protein HVA22(PubMedID : 29862293)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
13 Sobic.004G243300 expressed protein -
14 Sobic.010G101300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
15 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
16 Sobic.003G292400 NADP-dependent malic enzyme(PubMedID : 26186930)@NADP-malic enzyme(PubMedID : 26904072)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@C4 carbon fixation(PubMedID : 28620409)@NADP-dependent malic enzyme, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
17 Sobic.009G025500 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed -
18 Sobic.010G133000 late embryogenesis abundant group 1, putative, expressed -
19 Sobic.006G114700 Up-reguralion under drought(PubMedID : 24916767)@phosphofructokinase 2("PubMedID : 26759170,PubMedID : 24597475")@phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
20 Sobic.001G044300 transcription factor, putative, expressed K09060: plant G-box-binding factor


Gene co-expression network
sample Sobic006G050600 Sobic006G050600 Sobic004G114600 Sobic004G114600 Sobic006G050600--Sobic004G114600 Sobic005G138500 Sobic005G138500 Sobic006G050600--Sobic005G138500 Sobic009G171400 Sobic009G171400 Sobic006G050600--Sobic009G171400 Sobic002G413200 Sobic002G413200 Sobic006G050600--Sobic002G413200 Sobic001G396900 Sobic001G396900 Sobic006G050600--Sobic001G396900 Sobic006G034300 Sobic006G034300 Sobic006G050600--Sobic006G034300 Sobic002G143300 Sobic002G143300 Sobic006G050600--Sobic002G143300 Sobic003G011000 Sobic003G011000 Sobic006G050600--Sobic003G011000 Sobic006G269501 Sobic006G269501 Sobic006G050600--Sobic006G269501 Sobic004G114600--Sobic002G413200 Sobic004G114600--Sobic001G396900 Sobic006G208000 Sobic006G208000 Sobic004G114600--Sobic006G208000 Sobic004G114600--Sobic009G171400 Sobic004G114600--Sobic006G034300 Sobic002G062100 Sobic002G062100 Sobic004G114600--Sobic002G062100 Sobic009G025500 Sobic009G025500 Sobic004G114600--Sobic009G025500 Sobic004G114600--Sobic006G050600 Sobic005G165800 Sobic005G165800 Sobic004G114600--Sobic005G165800 Sobic005G138500--Sobic006G269501 Sobic005G138500--Sobic001G396900 Sobic005G138500--Sobic009G171400 Sobic005G138500--Sobic002G413200 Sobic005G138500--Sobic004G114600 Sobic005G138500--Sobic006G050600 Sobic005G138500--Sobic002G143300 Sobic005G138500--Sobic006G034300 Sobic004G243300 Sobic004G243300 Sobic005G138500--Sobic004G243300 Sobic010G101300 Sobic010G101300 Sobic009G171400--Sobic010G101300 Sobic009G171400--Sobic004G114600 Sobic009G171400--Sobic005G138500 Sobic009G171400--Sobic001G396900 Sobic003G292400 Sobic003G292400 Sobic009G171400--Sobic003G292400 Sobic009G171400--Sobic004G243300 Sobic009G171400--Sobic006G034300 Sobic006G114700 Sobic006G114700 Sobic009G171400--Sobic006G114700 Sobic009G171400--Sobic003G011000 Sobic007G153600 Sobic007G153600 Sobic002G413200--Sobic007G153600 Sobic002G413200--Sobic004G114600 Sobic002G413200--Sobic002G143300 Sobic002G413200--Sobic002G062100 Sobic010G133000 Sobic010G133000 Sobic002G413200--Sobic010G133000 Sobic002G413200--Sobic006G208000 Sobic002G413200--Sobic009G025500 Sobic001G044300 Sobic001G044300 Sobic002G413200--Sobic001G044300 Sobic010G007800 Sobic010G007800 Sobic002G413200--Sobic010G007800 Sobic001G396900--Sobic005G138500 Sobic001G396900--Sobic004G114600 Sobic001G396900--Sobic006G034300 Sobic001G396900--Sobic005G165800 Sobic001G396900--Sobic009G171400 Sobic001G396900--Sobic002G413200 Sobic001G396900--Sobic003G011000 Sobic001G396900--Sobic006G050600 Sobic001G396900--Sobic007G153600 Sobic006G034300--Sobic003G011000 Sobic006G034300--Sobic001G396900 Sobic006G034300--Sobic004G114600 Sobic006G034300--Sobic005G165800 Sobic006G034300--Sobic009G171400 Sobic006G034300--Sobic005G138500 Sobic006G034300--Sobic002G413200 Sobic006G034300--Sobic006G050600 Sobic006G034300--Sobic006G208000 Sobic002G143300--Sobic002G413200 Sobic002G143300--Sobic010G007800 Sobic002G143300--Sobic007G153600 Sobic002G383500 Sobic002G383500 Sobic002G143300--Sobic002G383500 Sobic002G143300--Sobic010G133000 Sobic001G497700 Sobic001G497700 Sobic002G143300--Sobic001G497700 Sobic009G104600 Sobic009G104600 Sobic002G143300--Sobic009G104600 Sobic003G130400 Sobic003G130400 Sobic002G143300--Sobic003G130400 Sobic005G167650 Sobic005G167650 Sobic002G143300--Sobic005G167650 Sobic003G011000--Sobic006G034300 Sobic003G011000--Sobic009G171400 Sobic003G011000--Sobic004G114600 Sobic003G011000--Sobic005G138500 Sobic003G011000--Sobic001G396900 Sobic003G011000--Sobic005G165800 Sobic004G058600 Sobic004G058600 Sobic003G011000--Sobic004G058600 Sobic003G011000--Sobic003G292400 Sobic003G011000--Sobic010G101300 Sobic002G151200 Sobic002G151200 Sobic006G269501--Sobic002G151200 Sobic006G269501--Sobic005G138500 Sobic006G269501--Sobic004G243300 Sobic006G269501--Sobic002G143300 Sobic006G269501--Sobic009G171400 Sobic006G269501--Sobic001G396900 Sobic006G269501--Sobic006G050600 Sobic001G354800 Sobic001G354800 Sobic006G269501--Sobic001G354800 Sobic001G492000 Sobic001G492000 Sobic006G269501--Sobic001G492000
Octagon: transcription factors


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