Gene annotation
Transcriptome id Sobic.002G158500.8,Sobic.002G158500.10,Sobic.002G158500.2,Sobic.002G158500.3,Sobic.002G158500.11,Sobic.002G158500.5,Sobic.002G158500.6,Sobic.002G158500.9,Sobic.002G158500.1,Sobic.002G158500.12,Sobic.002G158500.7,Sobic.002G158500.4
Synonym Sb02g020230
Functional annotation ankyrin, putative, expressed
UniProt A0A1W0W464 , A0A1W0W4E0 , A0A1B6QBM7 , A0A1W0W4B8 , A0A1W0W478 , A0A1B6QBM9
Pfam PF13414 PF12796
Panther DB PTHR22904 PTHR22904:SF326
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04710 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os02g29160.1 : ankyrin, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G532800 RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
2 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
3 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
4 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
5 Sobic.009G146250 - -
6 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -
7 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
8 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G230800 expressed protein -
10 Sobic.002G315400 expressed protein -
11 Sobic.010G250400 OsSub52 - Putative Subtilisin homologue, expressed -
12 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
13 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
14 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
15 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
16 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
17 Sobic.006G195500 DNA-binding protein, putative, expressed K10742: DNA replication ATP-dependent helicase Dna2
18 Sobic.004G052200 expressed protein -
19 Sobic.009G028100 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
20 Sobic.007G218100 transmembrane receptor, putative, expressed -


Gene co-expression network
sample Sobic002G158500 Sobic002G158500 Sobic001G532800 Sobic001G532800 Sobic002G158500--Sobic001G532800 Sobic007G112100 Sobic007G112100 Sobic002G158500--Sobic007G112100 Sobic009G109300 Sobic009G109300 Sobic002G158500--Sobic009G109300 Sobic005G068800 Sobic005G068800 Sobic002G158500--Sobic005G068800 Sobic009G146250 Sobic009G146250 Sobic002G158500--Sobic009G146250 Sobic007G125300 Sobic007G125300 Sobic002G158500--Sobic007G125300 Sobic007G187700 Sobic007G187700 Sobic002G158500--Sobic007G187700 Sobic003G084200 Sobic003G084200 Sobic002G158500--Sobic003G084200 Sobic002G230800 Sobic002G230800 Sobic002G158500--Sobic002G230800 Sobic007G218100 Sobic007G218100 Sobic001G532800--Sobic007G218100 Sobic001G532800--Sobic007G112100 Sobic002G236700 Sobic002G236700 Sobic001G532800--Sobic002G236700 Sobic010G250400 Sobic010G250400 Sobic001G532800--Sobic010G250400 Sobic001G532800--Sobic002G230800 Sobic001G532800--Sobic002G158500 Sobic003G147500 Sobic003G147500 Sobic001G532800--Sobic003G147500 Sobic001G532800--Sobic009G109300 Sobic008G100700 Sobic008G100700 Sobic001G532800--Sobic008G100700 Sobic007G112100--Sobic009G109300 Sobic007G112100--Sobic001G532800 Sobic004G032900 Sobic004G032900 Sobic007G112100--Sobic004G032900 Sobic007G112100--Sobic002G158500 Sobic007G112100--Sobic002G236700 Sobic006G120600 Sobic006G120600 Sobic007G112100--Sobic006G120600 Sobic001G140700 Sobic001G140700 Sobic007G112100--Sobic001G140700 Sobic002G304400 Sobic002G304400 Sobic007G112100--Sobic002G304400 Sobic007G079600 Sobic007G079600 Sobic007G112100--Sobic007G079600 Sobic009G109300--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic009G109300--Sobic006G051000 Sobic010G103700 Sobic010G103700 Sobic009G109300--Sobic010G103700 Sobic006G195500 Sobic006G195500 Sobic009G109300--Sobic006G195500 Sobic001G238900 Sobic001G238900 Sobic009G109300--Sobic001G238900 Sobic009G109300--Sobic002G230800 Sobic003G183700 Sobic003G183700 Sobic009G109300--Sobic003G183700 Sobic003G179500 Sobic003G179500 Sobic009G109300--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic009G109300--Sobic002G246900 Sobic001G507000 Sobic001G507000 Sobic005G068800--Sobic001G507000 Sobic004G156200 Sobic004G156200 Sobic005G068800--Sobic004G156200 Sobic004G095200 Sobic004G095200 Sobic005G068800--Sobic004G095200 Sobic005G068800--Sobic006G120600 Sobic005G068800--Sobic009G146250 Sobic005G068800--Sobic006G195500 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic009G052100 Sobic009G052100 Sobic005G068800--Sobic009G052100 Sobic009G146250--Sobic004G156200 Sobic009G146250--Sobic006G195500 Sobic009G146250--Sobic002G021200 Sobic006G275500 Sobic006G275500 Sobic009G146250--Sobic006G275500 Sobic009G146250--Sobic006G120600 Sobic009G146250--Sobic007G187700 Sobic001G304800 Sobic001G304800 Sobic009G146250--Sobic001G304800 Sobic009G146250--Sobic005G068800 Sobic001G377700 Sobic001G377700 Sobic009G146250--Sobic001G377700 Sobic002G290000 Sobic002G290000 Sobic007G125300--Sobic002G290000 Sobic005G110535 Sobic005G110535 Sobic007G125300--Sobic005G110535 Sobic008G148000 Sobic008G148000 Sobic007G125300--Sobic008G148000 Sobic004G053900 Sobic004G053900 Sobic007G125300--Sobic004G053900 Sobic001G109700 Sobic001G109700 Sobic007G125300--Sobic001G109700 Sobic007G125300--Sobic001G377700 Sobic002G204400 Sobic002G204400 Sobic007G125300--Sobic002G204400 Sobic003G118100 Sobic003G118100 Sobic007G125300--Sobic003G118100 Sobic002G113400 Sobic002G113400 Sobic007G125300--Sobic002G113400 Sobic002G168000 Sobic002G168000 Sobic007G187700--Sobic002G168000 Sobic007G187700--Sobic002G021200 Sobic005G153000 Sobic005G153000 Sobic007G187700--Sobic005G153000 Sobic001G104500 Sobic001G104500 Sobic007G187700--Sobic001G104500 Sobic007G187700--Sobic001G377700 Sobic007G187700--Sobic006G275500 Sobic004G317000 Sobic004G317000 Sobic007G187700--Sobic004G317000 Sobic004G282601 Sobic004G282601 Sobic007G187700--Sobic004G282601 Sobic009G077300 Sobic009G077300 Sobic007G187700--Sobic009G077300 Sobic003G084200--Sobic001G104500 Sobic007G050800 Sobic007G050800 Sobic003G084200--Sobic007G050800 Sobic003G084200--Sobic006G275500 Sobic005G157300 Sobic005G157300 Sobic003G084200--Sobic005G157300 Sobic003G084200--Sobic002G168000 Sobic003G084200--Sobic007G187700 Sobic003G244000 Sobic003G244000 Sobic003G084200--Sobic003G244000 Sobic009G002200 Sobic009G002200 Sobic003G084200--Sobic009G002200 Sobic001G456400 Sobic001G456400 Sobic003G084200--Sobic001G456400 Sobic002G230800--Sobic001G238900 Sobic010G105400 Sobic010G105400 Sobic002G230800--Sobic010G105400 Sobic006G124400 Sobic006G124400 Sobic002G230800--Sobic006G124400 Sobic001G054700 Sobic001G054700 Sobic002G230800--Sobic001G054700 Sobic002G230800--Sobic003G179500 Sobic002G230800--Sobic009G109300 Sobic002G230800--Sobic007G218100 Sobic002G230800--Sobic002G246900 Sobic002G230800--Sobic003G244000
Octagon: transcription factors


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