Gene annotation
Transcriptome id Sobic.010G250400.1
Synonym SLP3, Sb10g028870
Functional annotation OsSub52 - Putative Subtilisin homologue, expressed
UniProt C5Z8W4
Pfam PF02225 PF06280 PF05922 PF00082
Panther DB PTHR10795 PTHR10795:SF431
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0005618cell wall GO:0004252serine-type endopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT4G30020 : PA-domain containing subtilase family protein
RAP-DB (Rice) LOC_Os06g48650.1 : OsSub52 - Putative Subtilisin homologue, expressed
MaizeGDB (Corn) Zm00025a030929 , Zm00025a018351 , Zm00025a041784
Brachypodium KQK17377 , KQK17378
Barley HORVU2Hr1G110210.1 , HORVU6Hr1G047970.1 , HORVU6Hr1G047970.55 , HORVU6Hr1G047970.54 , HORVU6Hr1G047970.57 , HORVU6Hr1G047970.50 , HORVU6Hr1G047970.52 , HORVU6Hr1G047970.11 , HORVU6Hr1G047970.12 , HORVU6Hr1G047970.19 , HORVU6Hr1G047970.17 , HORVU6Hr1G047970.16 , HORVU6Hr1G047970.42 , HORVU6Hr1G047970.43 , HORVU6Hr1G047970.47 , HORVU6Hr1G047970.73 , HORVU6Hr1G047970.72 , HORVU6Hr1G047970.77 , HORVU6Hr1G047970.75 , HORVU6Hr1G047970.4 , HORVU6Hr1G047970.6 , HORVU6Hr1G047970.3 , HORVU6Hr1G047970.39 , HORVU6Hr1G047970.35 , HORVU4Hr1G065300.1 , HORVU6Hr1G047970.80 , HORVU6Hr1G047970.81 , HORVU6Hr1G047970.62 , HORVU6Hr1G047970.63 , HORVU6Hr1G047970.64 , HORVU6Hr1G047970.65 , HORVU6Hr1G047970.66 , HORVU6Hr1G047970.67 , HORVU7Hr1G097470.12 , HORVU7Hr1G097470.10 , HORVU7Hr1G097470.11 , HORVU7Hr1G097470.8 , HORVU7Hr1G097470.9 , HORVU7Hr1G097470.4 , HORVU7Hr1G097470.5 , HORVU7Hr1G097470.6 , HORVU7Hr1G097470.7 , HORVU7Hr1G097470.1 , HORVU7Hr1G097470.2 , HORVU7Hr1G097470.3 , HORVU6Hr1G047970.28 , HORVU6Hr1G047970.25 , HORVU6Hr1G047970.26 , HORVU6Hr1G047970.21 , HORVU6Hr1G047970.22
Wheat TraesCS7D02G413700 , TraesCS7A02G421400 , TraesCS7B02G321700 , TraesCS7A02G421400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
2 Sobic.005G153000 agenet domain containing protein, expressed -
3 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
4 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
5 Sobic.002G168000 expressed protein -
6 Sobic.009G207400 ATP binding protein, putative, expressed -
7 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
8 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
9 Sobic.001G532800 RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
10 Sobic.009G077300 protein kinase, putative, expressed -
11 Sobic.003G370300 GPI transamidase subunit PIG-U domain containing protein, expressed K10879: DNA-repair protein XRCC2
12 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
13 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
14 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
15 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
16 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
17 Sobic.004G222200 - -
18 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.002G144600 - -
20 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic010G250400 Sobic010G250400 Sobic009G188900 Sobic009G188900 Sobic010G250400--Sobic009G188900 Sobic005G153000 Sobic005G153000 Sobic010G250400--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic010G250400--Sobic002G021200 Sobic003G147500 Sobic003G147500 Sobic010G250400--Sobic003G147500 Sobic002G168000 Sobic002G168000 Sobic010G250400--Sobic002G168000 Sobic009G207400 Sobic009G207400 Sobic010G250400--Sobic009G207400 Sobic007G187700 Sobic007G187700 Sobic010G250400--Sobic007G187700 Sobic001G054700 Sobic001G054700 Sobic010G250400--Sobic001G054700 Sobic001G532800 Sobic001G532800 Sobic010G250400--Sobic001G532800 Sobic009G188900--Sobic002G168000 Sobic009G188900--Sobic010G250400 Sobic006G281900 Sobic006G281900 Sobic009G188900--Sobic006G281900 Sobic001G199500 Sobic001G199500 Sobic009G188900--Sobic001G199500 Sobic006G275500 Sobic006G275500 Sobic009G188900--Sobic006G275500 Sobic001G425700 Sobic001G425700 Sobic009G188900--Sobic001G425700 Sobic001G290500 Sobic001G290500 Sobic009G188900--Sobic001G290500 Sobic009G188900--Sobic005G153000 Sobic009G188900--Sobic007G187700 Sobic009G077300 Sobic009G077300 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic004G282601 Sobic004G282601 Sobic005G153000--Sobic004G282601 Sobic010G037901 Sobic010G037901 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic006G221300 Sobic006G221300 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600 Sobic002G021200--Sobic007G187700 Sobic001G377700 Sobic001G377700 Sobic002G021200--Sobic001G377700 Sobic002G021200--Sobic002G168000 Sobic002G021200--Sobic006G281900 Sobic002G021200--Sobic001G054700 Sobic003G292700 Sobic003G292700 Sobic002G021200--Sobic003G292700 Sobic003G055600 Sobic003G055600 Sobic002G021200--Sobic003G055600 Sobic005G157300 Sobic005G157300 Sobic002G021200--Sobic005G157300 Sobic002G021200--Sobic009G077300 Sobic006G016700 Sobic006G016700 Sobic003G147500--Sobic006G016700 Sobic003G147500--Sobic006G275500 Sobic009G224300 Sobic009G224300 Sobic003G147500--Sobic009G224300 Sobic008G090000 Sobic008G090000 Sobic003G147500--Sobic008G090000 Sobic003G147500--Sobic010G250400 Sobic003G147500--Sobic002G168000 Sobic007G219100 Sobic007G219100 Sobic003G147500--Sobic007G219100 Sobic004G123200 Sobic004G123200 Sobic003G147500--Sobic004G123200 Sobic009G146250 Sobic009G146250 Sobic003G147500--Sobic009G146250 Sobic002G168000--Sobic007G187700 Sobic002G168000--Sobic005G153000 Sobic002G168000--Sobic002G021200 Sobic002G168000--Sobic006G281900 Sobic002G168000--Sobic006G275500 Sobic002G168000--Sobic009G188900 Sobic002G168000--Sobic009G077300 Sobic002G168000--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic002G168000--Sobic001G104500 Sobic005G163400 Sobic005G163400 Sobic009G207400--Sobic005G163400 Sobic009G200000 Sobic009G200000 Sobic009G207400--Sobic009G200000 Sobic008G042200 Sobic008G042200 Sobic009G207400--Sobic008G042200 Sobic005G092700 Sobic005G092700 Sobic009G207400--Sobic005G092700 Sobic009G207400--Sobic010G250400 Sobic001G244900 Sobic001G244900 Sobic009G207400--Sobic001G244900 Sobic009G207400--Sobic003G147500 Sobic003G104100 Sobic003G104100 Sobic009G207400--Sobic003G104100 Sobic008G052300 Sobic008G052300 Sobic009G207400--Sobic008G052300 Sobic007G187700--Sobic002G168000 Sobic007G187700--Sobic002G021200 Sobic007G187700--Sobic005G153000 Sobic007G187700--Sobic001G104500 Sobic007G187700--Sobic001G377700 Sobic007G187700--Sobic006G275500 Sobic004G317000 Sobic004G317000 Sobic007G187700--Sobic004G317000 Sobic007G187700--Sobic004G282601 Sobic007G187700--Sobic009G077300 Sobic001G054700--Sobic006G221300 Sobic001G054700--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic001G054700--Sobic004G108400 Sobic009G143200 Sobic009G143200 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic009G127800 Sobic009G127800 Sobic001G054700--Sobic009G127800 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic007G218100 Sobic007G218100 Sobic001G532800--Sobic007G218100 Sobic007G112100 Sobic007G112100 Sobic001G532800--Sobic007G112100 Sobic002G236700 Sobic002G236700 Sobic001G532800--Sobic002G236700 Sobic001G532800--Sobic010G250400 Sobic002G230800 Sobic002G230800 Sobic001G532800--Sobic002G230800 Sobic002G158500 Sobic002G158500 Sobic001G532800--Sobic002G158500 Sobic001G532800--Sobic003G147500 Sobic009G109300 Sobic009G109300 Sobic001G532800--Sobic009G109300 Sobic008G100700 Sobic008G100700 Sobic001G532800--Sobic008G100700
Octagon: transcription factors


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