Gene annotation
Transcriptome id Sobic.004G222200.2,Sobic.004G222200.1
Synonym
Functional annotation -
UniProt A0A194YR19
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G222150 - -
2 Sobic.002G144600 - -
3 Sobic.004G123200 MYB family transcription factor, putative, expressed -
4 Sobic.010G250400 OsSub52 - Putative Subtilisin homologue, expressed -
5 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
6 Sobic.008G046200 PHD-finger family protein, expressed -
7 Sobic.005G153000 agenet domain containing protein, expressed -
8 Sobic.006G226000 expressed protein -
9 Sobic.003G001800 expressed protein -
10 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.010G037901 - -
12 Sobic.003G086800 ZOS1-02 - C2H2 zinc finger protein, expressed -
13 Sobic.005G196600 expressed protein -
14 Sobic.010G214800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.002G168000 expressed protein -
16 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
17 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
18 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
19 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
20 Sobic.010G257000 two-component response regulator, putative, expressed -


Gene co-expression network
sample Sobic004G222200 Sobic004G222200 Sobic004G222150 Sobic004G222150 Sobic004G222200--Sobic004G222150 Sobic002G144600 Sobic002G144600 Sobic004G222200--Sobic002G144600 Sobic004G123200 Sobic004G123200 Sobic004G222200--Sobic004G123200 Sobic010G250400 Sobic010G250400 Sobic004G222200--Sobic010G250400 Sobic002G055800 Sobic002G055800 Sobic004G222200--Sobic002G055800 Sobic008G046200 Sobic008G046200 Sobic004G222200--Sobic008G046200 Sobic005G153000 Sobic005G153000 Sobic004G222200--Sobic005G153000 Sobic006G226000 Sobic006G226000 Sobic004G222200--Sobic006G226000 Sobic003G001800 Sobic003G001800 Sobic004G222200--Sobic003G001800 Sobic010G211200 Sobic010G211200 Sobic004G222150--Sobic010G211200 Sobic004G222150--Sobic004G123200 Sobic009G241900 Sobic009G241900 Sobic004G222150--Sobic009G241900 Sobic008G191700 Sobic008G191700 Sobic004G222150--Sobic008G191700 Sobic003G427000 Sobic003G427000 Sobic004G222150--Sobic003G427000 Sobic005G212201 Sobic005G212201 Sobic004G222150--Sobic005G212201 Sobic009G012500 Sobic009G012500 Sobic004G222150--Sobic009G012500 Sobic008G141900 Sobic008G141900 Sobic004G222150--Sobic008G141900 Sobic001G393101 Sobic001G393101 Sobic004G222150--Sobic001G393101 Sobic002G144600--Sobic008G046200 Sobic002G144600--Sobic004G222200 Sobic009G188500 Sobic009G188500 Sobic002G144600--Sobic009G188500 Sobic002G144600--Sobic005G153000 Sobic005G196600 Sobic005G196600 Sobic002G144600--Sobic005G196600 Sobic006G197400 Sobic006G197400 Sobic002G144600--Sobic006G197400 Sobic003G086800 Sobic003G086800 Sobic002G144600--Sobic003G086800 Sobic002G144600--Sobic010G250400 Sobic010G037901 Sobic010G037901 Sobic002G144600--Sobic010G037901 Sobic004G123200--Sobic002G055800 Sobic004G123200--Sobic009G012500 Sobic004G123200--Sobic004G222150 Sobic006G083900 Sobic006G083900 Sobic004G123200--Sobic006G083900 Sobic004G123200--Sobic006G226000 Sobic002G256900 Sobic002G256900 Sobic004G123200--Sobic002G256900 Sobic006G217800 Sobic006G217800 Sobic004G123200--Sobic006G217800 Sobic002G266300 Sobic002G266300 Sobic004G123200--Sobic002G266300 Sobic004G123200--Sobic001G393101 Sobic009G188900 Sobic009G188900 Sobic010G250400--Sobic009G188900 Sobic010G250400--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic010G250400--Sobic002G021200 Sobic003G147500 Sobic003G147500 Sobic010G250400--Sobic003G147500 Sobic002G168000 Sobic002G168000 Sobic010G250400--Sobic002G168000 Sobic009G207400 Sobic009G207400 Sobic010G250400--Sobic009G207400 Sobic007G187700 Sobic007G187700 Sobic010G250400--Sobic007G187700 Sobic001G054700 Sobic001G054700 Sobic010G250400--Sobic001G054700 Sobic001G532800 Sobic001G532800 Sobic010G250400--Sobic001G532800 Sobic002G055800--Sobic004G123200 Sobic002G055800--Sobic006G226000 Sobic001G136400 Sobic001G136400 Sobic002G055800--Sobic001G136400 Sobic001G366300 Sobic001G366300 Sobic002G055800--Sobic001G366300 Sobic002G055800--Sobic003G001800 Sobic002G055800--Sobic009G012500 Sobic002G055800--Sobic006G083900 Sobic002G240000 Sobic002G240000 Sobic002G055800--Sobic002G240000 Sobic004G142400 Sobic004G142400 Sobic002G055800--Sobic004G142400 Sobic008G046200--Sobic002G144600 Sobic003G005500 Sobic003G005500 Sobic008G046200--Sobic003G005500 Sobic007G122700 Sobic007G122700 Sobic008G046200--Sobic007G122700 Sobic003G129500 Sobic003G129500 Sobic008G046200--Sobic003G129500 Sobic002G286632 Sobic002G286632 Sobic008G046200--Sobic002G286632 Sobic009G012400 Sobic009G012400 Sobic008G046200--Sobic009G012400 Sobic008G046200--Sobic004G222200 Sobic008G046200--Sobic008G141900 Sobic003G183466 Sobic003G183466 Sobic008G046200--Sobic003G183466 Sobic009G077300 Sobic009G077300 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic004G282601 Sobic004G282601 Sobic005G153000--Sobic004G282601 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic006G221300 Sobic006G221300 Sobic005G153000--Sobic006G221300 Sobic005G153000--Sobic003G129500 Sobic005G153000--Sobic005G196600 Sobic009G031800 Sobic009G031800 Sobic006G226000--Sobic009G031800 Sobic007G160400 Sobic007G160400 Sobic006G226000--Sobic007G160400 Sobic006G226000--Sobic010G037901 Sobic006G226000--Sobic002G055800 Sobic006G226000--Sobic002G256900 Sobic006G226000--Sobic004G123200 Sobic006G226000--Sobic003G086800 Sobic006G226000--Sobic002G240000 Sobic006G226000--Sobic001G136400 Sobic009G014800 Sobic009G014800 Sobic003G001800--Sobic009G014800 Sobic009G188600 Sobic009G188600 Sobic003G001800--Sobic009G188600 Sobic003G001800--Sobic002G055800 Sobic003G001800--Sobic009G012500 Sobic003G001800--Sobic004G123200 Sobic003G001800--Sobic001G136400 Sobic003G001800--Sobic006G226000 Sobic003G001800--Sobic010G037901 Sobic001G203350 Sobic001G203350 Sobic003G001800--Sobic001G203350
Octagon: transcription factors


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