Gene annotation
Transcriptome id Sobic.004G052200.1
Synonym Sb04g004450
Functional annotation expressed protein
UniProt C5XVI0
Pfam -
Panther DB PTHR31722 PTHR31722:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79060 : -
RAP-DB (Rice) LOC_Os02g06960.1 : expressed protein
MaizeGDB (Corn) Zm00025a034812 , Zm00025a019043 , Zm00025a041921
Brachypodium -
Barley HORVU7Hr1G106790.1 , HORVU6Hr1G027190.4 , HORVU6Hr1G027190.1 , HORVU6Hr1G027190.3 , HORVU6Hr1G027190.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G221300 expressed protein -
2 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
3 Sobic.009G077300 protein kinase, putative, expressed -
4 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
5 Sobic.006G124400 ATP binding protein, putative, expressed -
6 Sobic.007G218100 transmembrane receptor, putative, expressed -
7 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
8 Sobic.001G104500 growth-regulating factor, putative, expressed -
9 Sobic.002G230800 expressed protein -
10 Sobic.001G304800 expressed protein -
11 Sobic.004G282601 - -
12 Sobic.005G153000 agenet domain containing protein, expressed -
13 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
14 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
15 Sobic.007G057900 - -
16 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
17 Sobic.009G101100 patellin protein, putative, expressed -
18 Sobic.008G159901 - K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
19 Sobic.002G392500 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
20 Sobic.009G146250 - -


Gene co-expression network
sample Sobic004G052200 Sobic004G052200 Sobic006G221300 Sobic006G221300 Sobic004G052200--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G052200--Sobic009G143200 Sobic009G077300 Sobic009G077300 Sobic004G052200--Sobic009G077300 Sobic001G054700 Sobic001G054700 Sobic004G052200--Sobic001G054700 Sobic006G124400 Sobic006G124400 Sobic004G052200--Sobic006G124400 Sobic007G218100 Sobic007G218100 Sobic004G052200--Sobic007G218100 Sobic006G275500 Sobic006G275500 Sobic004G052200--Sobic006G275500 Sobic001G104500 Sobic001G104500 Sobic004G052200--Sobic001G104500 Sobic002G230800 Sobic002G230800 Sobic004G052200--Sobic002G230800 Sobic009G127800 Sobic009G127800 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic006G221300--Sobic009G077300 Sobic005G153000 Sobic005G153000 Sobic006G221300--Sobic005G153000 Sobic006G221300--Sobic009G143200 Sobic004G108400 Sobic004G108400 Sobic006G221300--Sobic004G108400 Sobic006G221300--Sobic004G052200 Sobic009G225500 Sobic009G225500 Sobic006G221300--Sobic009G225500 Sobic008G052300 Sobic008G052300 Sobic006G221300--Sobic008G052300 Sobic005G157300 Sobic005G157300 Sobic009G143200--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic009G143200--Sobic004G317000 Sobic009G143200--Sobic001G054700 Sobic003G055600 Sobic003G055600 Sobic009G143200--Sobic003G055600 Sobic009G143200--Sobic006G221300 Sobic009G143200--Sobic009G077300 Sobic009G143200--Sobic004G108400 Sobic009G143200--Sobic004G052200 Sobic007G187700 Sobic007G187700 Sobic009G143200--Sobic007G187700 Sobic009G077300--Sobic005G153000 Sobic009G077300--Sobic006G221300 Sobic009G077300--Sobic001G054700 Sobic005G163400 Sobic005G163400 Sobic009G077300--Sobic005G163400 Sobic002G168000 Sobic002G168000 Sobic009G077300--Sobic002G168000 Sobic002G050700 Sobic002G050700 Sobic009G077300--Sobic002G050700 Sobic004G282601 Sobic004G282601 Sobic009G077300--Sobic004G282601 Sobic009G077300--Sobic009G143200 Sobic009G077300--Sobic007G187700 Sobic001G054700--Sobic006G221300 Sobic001G054700--Sobic009G077300 Sobic001G054700--Sobic004G108400 Sobic001G054700--Sobic009G143200 Sobic001G054700--Sobic002G050700 Sobic001G054700--Sobic006G124400 Sobic001G054700--Sobic009G127800 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic002G296000 Sobic002G296000 Sobic006G124400--Sobic002G296000 Sobic010G105400 Sobic010G105400 Sobic006G124400--Sobic010G105400 Sobic009G101100 Sobic009G101100 Sobic006G124400--Sobic009G101100 Sobic007G027900 Sobic007G027900 Sobic006G124400--Sobic007G027900 Sobic004G273000 Sobic004G273000 Sobic006G124400--Sobic004G273000 Sobic005G005700 Sobic005G005700 Sobic006G124400--Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic006G124400--Sobic008G006800 Sobic001G477400 Sobic001G477400 Sobic006G124400--Sobic001G477400 Sobic001G398400 Sobic001G398400 Sobic006G124400--Sobic001G398400 Sobic001G532800 Sobic001G532800 Sobic007G218100--Sobic001G532800 Sobic001G304800 Sobic001G304800 Sobic007G218100--Sobic001G304800 Sobic007G218100--Sobic004G052200 Sobic007G218100--Sobic002G230800 Sobic003G246800 Sobic003G246800 Sobic007G218100--Sobic003G246800 Sobic007G218100--Sobic006G275500 Sobic002G392500 Sobic002G392500 Sobic007G218100--Sobic002G392500 Sobic007G218100--Sobic001G104500 Sobic008G159901 Sobic008G159901 Sobic007G218100--Sobic008G159901 Sobic006G016700 Sobic006G016700 Sobic006G275500--Sobic006G016700 Sobic006G275500--Sobic001G104500 Sobic006G275500--Sobic002G168000 Sobic003G147500 Sobic003G147500 Sobic006G275500--Sobic003G147500 Sobic006G275500--Sobic007G187700 Sobic008G090000 Sobic008G090000 Sobic006G275500--Sobic008G090000 Sobic006G275500--Sobic009G077300 Sobic006G094100 Sobic006G094100 Sobic006G275500--Sobic006G094100 Sobic009G146250 Sobic009G146250 Sobic006G275500--Sobic009G146250 Sobic001G104500--Sobic004G282601 Sobic001G104500--Sobic006G275500 Sobic001G104500--Sobic007G187700 Sobic001G104500--Sobic004G317000 Sobic002G256900 Sobic002G256900 Sobic001G104500--Sobic002G256900 Sobic001G104500--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic001G104500--Sobic002G055800 Sobic001G104500--Sobic006G016700 Sobic010G037901 Sobic010G037901 Sobic001G104500--Sobic010G037901 Sobic001G238900 Sobic001G238900 Sobic002G230800--Sobic001G238900 Sobic002G230800--Sobic010G105400 Sobic002G230800--Sobic006G124400 Sobic002G230800--Sobic001G054700 Sobic003G179500 Sobic003G179500 Sobic002G230800--Sobic003G179500 Sobic009G109300 Sobic009G109300 Sobic002G230800--Sobic009G109300 Sobic002G230800--Sobic007G218100 Sobic002G246900 Sobic002G246900 Sobic002G230800--Sobic002G246900 Sobic003G244000 Sobic003G244000 Sobic002G230800--Sobic003G244000
Octagon: transcription factors


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