Gene annotation
Transcriptome id Sobic.008G159901.2,Sobic.008G159901.1
Synonym -
Functional annotation -
UniProt A0A1Z5R746
Pfam PF00069
Panther DB PTHR24362 PTHR24362:SF218
NCBI CDD KOG0589; Serine/threonine protein kinase
KEGG Orthology K08857; NIMA (never in mitosis gene a)-related kinase 1/4/5
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G04810 : NIMA-related kinase 2
RAP-DB (Rice) LOC_Os12g41180.1 : LSTK-1-like kinase, putative, expressed
MaizeGDB (Corn) Zm00025a025305 , Zm00025a017279 , Zm00025a004607
Brachypodium KQK14053 , KQK14052 , KQK14051 , KQK14055 , KQK14054 , PNT74400 , PNT74399 , PNT74398 , PNT74397 , PNT62368 , KQJ85917 , KQJ85916 , KQJ85918
Barley HORVU5Hr1G013260.19 , HORVU5Hr1G013260.18 , HORVU5Hr1G013260.13 , HORVU5Hr1G013260.12 , HORVU5Hr1G013260.11 , HORVU5Hr1G013260.17 , HORVU5Hr1G013260.16 , HORVU5Hr1G013260.15 , HORVU5Hr1G013260.14 , HORVU5Hr1G013260.22 , HORVU5Hr1G013260.23 , HORVU5Hr1G013260.20 , HORVU5Hr1G013260.21 , HORVU5Hr1G013260.26 , HORVU5Hr1G013260.24 , HORVU5Hr1G013260.25 , HORVU5Hr1G013260.3 , HORVU5Hr1G013260.2 , HORVU5Hr1G013260.1 , HORVU5Hr1G013260.9 , HORVU5Hr1G013260.8 , HORVU5Hr1G013260.7 , HORVU5Hr1G013260.6 , HORVU5Hr1G013260.5 , HORVU5Hr1G013260.4
Wheat TraesCS5B02G061800 , TraesCS5A02G054700 , TraesCS5D02G065900
Populus PNT46672 , PNT46674


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G124400 ATP binding protein, putative, expressed -
2 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
3 Sobic.004G052200 expressed protein -
4 Sobic.006G221300 expressed protein -
5 Sobic.007G218100 transmembrane receptor, putative, expressed -
6 Sobic.009G077300 protein kinase, putative, expressed -
7 Sobic.004G273000 MYB family transcription factor, putative, expressed -
8 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
9 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
10 Sobic.002G230800 expressed protein -
11 Sobic.003G283600 HVA22, putative, expressed -
12 Sobic.008G083500 expressed protein -
13 Sobic.002G392500 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
14 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
15 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
16 Sobic.001G304800 expressed protein -
17 Sobic.009G101100 patellin protein, putative, expressed -
18 Sobic.003G246800 GATA zinc finger domain containing protein, expressed -
19 Sobic.010G003300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
20 Sobic.001G122100 protein kinase family protein, putative, expressed K08866: TTK, serine/threonine-protein kinase TTK/MPS1


Gene co-expression network
sample Sobic008G159901 Sobic008G159901 Sobic006G124400 Sobic006G124400 Sobic008G159901--Sobic006G124400 Sobic001G054700 Sobic001G054700 Sobic008G159901--Sobic001G054700 Sobic004G052200 Sobic004G052200 Sobic008G159901--Sobic004G052200 Sobic006G221300 Sobic006G221300 Sobic008G159901--Sobic006G221300 Sobic007G218100 Sobic007G218100 Sobic008G159901--Sobic007G218100 Sobic009G077300 Sobic009G077300 Sobic008G159901--Sobic009G077300 Sobic004G273000 Sobic004G273000 Sobic008G159901--Sobic004G273000 Sobic006G275500 Sobic006G275500 Sobic008G159901--Sobic006G275500 Sobic001G290500 Sobic001G290500 Sobic008G159901--Sobic001G290500 Sobic002G296000 Sobic002G296000 Sobic006G124400--Sobic002G296000 Sobic010G105400 Sobic010G105400 Sobic006G124400--Sobic010G105400 Sobic009G101100 Sobic009G101100 Sobic006G124400--Sobic009G101100 Sobic007G027900 Sobic007G027900 Sobic006G124400--Sobic007G027900 Sobic006G124400--Sobic004G273000 Sobic005G005700 Sobic005G005700 Sobic006G124400--Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic006G124400--Sobic008G006800 Sobic001G477400 Sobic001G477400 Sobic006G124400--Sobic001G477400 Sobic001G398400 Sobic001G398400 Sobic006G124400--Sobic001G398400 Sobic001G054700--Sobic006G221300 Sobic001G054700--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic001G054700--Sobic004G108400 Sobic009G143200 Sobic009G143200 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic001G054700--Sobic006G124400 Sobic009G127800 Sobic009G127800 Sobic001G054700--Sobic009G127800 Sobic005G153000 Sobic005G153000 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic004G052200--Sobic006G221300 Sobic004G052200--Sobic009G143200 Sobic004G052200--Sobic009G077300 Sobic004G052200--Sobic001G054700 Sobic004G052200--Sobic006G124400 Sobic004G052200--Sobic007G218100 Sobic004G052200--Sobic006G275500 Sobic001G104500 Sobic001G104500 Sobic004G052200--Sobic001G104500 Sobic002G230800 Sobic002G230800 Sobic004G052200--Sobic002G230800 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic006G221300--Sobic009G077300 Sobic006G221300--Sobic005G153000 Sobic006G221300--Sobic009G143200 Sobic006G221300--Sobic004G108400 Sobic006G221300--Sobic004G052200 Sobic009G225500 Sobic009G225500 Sobic006G221300--Sobic009G225500 Sobic008G052300 Sobic008G052300 Sobic006G221300--Sobic008G052300 Sobic001G532800 Sobic001G532800 Sobic007G218100--Sobic001G532800 Sobic001G304800 Sobic001G304800 Sobic007G218100--Sobic001G304800 Sobic007G218100--Sobic004G052200 Sobic007G218100--Sobic002G230800 Sobic003G246800 Sobic003G246800 Sobic007G218100--Sobic003G246800 Sobic007G218100--Sobic006G275500 Sobic002G392500 Sobic002G392500 Sobic007G218100--Sobic002G392500 Sobic007G218100--Sobic001G104500 Sobic007G218100--Sobic008G159901 Sobic009G077300--Sobic005G153000 Sobic009G077300--Sobic006G221300 Sobic009G077300--Sobic001G054700 Sobic005G163400 Sobic005G163400 Sobic009G077300--Sobic005G163400 Sobic002G168000 Sobic002G168000 Sobic009G077300--Sobic002G168000 Sobic009G077300--Sobic002G050700 Sobic004G282601 Sobic004G282601 Sobic009G077300--Sobic004G282601 Sobic009G077300--Sobic009G143200 Sobic007G187700 Sobic007G187700 Sobic009G077300--Sobic007G187700 Sobic004G273000--Sobic006G124400 Sobic004G273000--Sobic001G477400 Sobic004G273000--Sobic002G392500 Sobic004G273000--Sobic007G027900 Sobic004G273000--Sobic010G105400 Sobic004G273000--Sobic002G296000 Sobic001G289900 Sobic001G289900 Sobic004G273000--Sobic001G289900 Sobic010G261700 Sobic010G261700 Sobic004G273000--Sobic010G261700 Sobic004G273000--Sobic005G005700 Sobic006G016700 Sobic006G016700 Sobic006G275500--Sobic006G016700 Sobic006G275500--Sobic001G104500 Sobic006G275500--Sobic002G168000 Sobic003G147500 Sobic003G147500 Sobic006G275500--Sobic003G147500 Sobic006G275500--Sobic007G187700 Sobic008G090000 Sobic008G090000 Sobic006G275500--Sobic008G090000 Sobic006G275500--Sobic009G077300 Sobic006G094100 Sobic006G094100 Sobic006G275500--Sobic006G094100 Sobic009G146250 Sobic009G146250 Sobic006G275500--Sobic009G146250 Sobic001G290500--Sobic009G077300 Sobic001G290500--Sobic006G094100 Sobic006G281900 Sobic006G281900 Sobic001G290500--Sobic006G281900 Sobic003G283600 Sobic003G283600 Sobic001G290500--Sobic003G283600 Sobic001G290500--Sobic006G275500 Sobic001G290500--Sobic001G054700 Sobic001G296100 Sobic001G296100 Sobic001G290500--Sobic001G296100 Sobic009G188900 Sobic009G188900 Sobic001G290500--Sobic009G188900 Sobic009G000600 Sobic009G000600 Sobic001G290500--Sobic009G000600
Octagon: transcription factors


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