Gene annotation
Transcriptome id Sobic.007G218100.1
Synonym Sb07g028470
Functional annotation transmembrane receptor, putative, expressed
UniProt C5YJ85
Pfam -
Panther DB PTHR32472 PTHR32472:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56220 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os08g38970.1 : transmembrane receptor, putative, expressed
MaizeGDB (Corn) Zm00025a033747
Brachypodium PNT68361 , PNT68363 , PNT68362 , KQJ98828
Barley HORVU5Hr1G072030.6 , HORVU5Hr1G072030.5 , HORVU5Hr1G072030.4 , HORVU5Hr1G072030.3 , HORVU5Hr1G072030.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G532800 RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
2 Sobic.001G304800 expressed protein -
3 Sobic.004G052200 expressed protein -
4 Sobic.002G230800 expressed protein -
5 Sobic.003G246800 GATA zinc finger domain containing protein, expressed -
6 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
7 Sobic.002G392500 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
8 Sobic.001G104500 growth-regulating factor, putative, expressed -
9 Sobic.008G159901 - K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
10 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
11 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
12 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
13 Sobic.010G191000 expressed protein -
14 Sobic.002G230900 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
15 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
16 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
17 Sobic.008G100700 SSXT protein, putative, expressed -
18 Sobic.009G077300 protein kinase, putative, expressed -
19 Sobic.009G101100 patellin protein, putative, expressed -
20 Sobic.009G146250 - -


Gene co-expression network
sample Sobic007G218100 Sobic007G218100 Sobic001G532800 Sobic001G532800 Sobic007G218100--Sobic001G532800 Sobic001G304800 Sobic001G304800 Sobic007G218100--Sobic001G304800 Sobic004G052200 Sobic004G052200 Sobic007G218100--Sobic004G052200 Sobic002G230800 Sobic002G230800 Sobic007G218100--Sobic002G230800 Sobic003G246800 Sobic003G246800 Sobic007G218100--Sobic003G246800 Sobic006G275500 Sobic006G275500 Sobic007G218100--Sobic006G275500 Sobic002G392500 Sobic002G392500 Sobic007G218100--Sobic002G392500 Sobic001G104500 Sobic001G104500 Sobic007G218100--Sobic001G104500 Sobic008G159901 Sobic008G159901 Sobic007G218100--Sobic008G159901 Sobic001G532800--Sobic007G218100 Sobic007G112100 Sobic007G112100 Sobic001G532800--Sobic007G112100 Sobic002G236700 Sobic002G236700 Sobic001G532800--Sobic002G236700 Sobic010G250400 Sobic010G250400 Sobic001G532800--Sobic010G250400 Sobic001G532800--Sobic002G230800 Sobic002G158500 Sobic002G158500 Sobic001G532800--Sobic002G158500 Sobic003G147500 Sobic003G147500 Sobic001G532800--Sobic003G147500 Sobic009G109300 Sobic009G109300 Sobic001G532800--Sobic009G109300 Sobic008G100700 Sobic008G100700 Sobic001G532800--Sobic008G100700 Sobic002G296000 Sobic002G296000 Sobic001G304800--Sobic002G296000 Sobic002G286700 Sobic002G286700 Sobic001G304800--Sobic002G286700 Sobic008G083500 Sobic008G083500 Sobic001G304800--Sobic008G083500 Sobic009G101100 Sobic009G101100 Sobic001G304800--Sobic009G101100 Sobic006G105600 Sobic006G105600 Sobic001G304800--Sobic006G105600 Sobic001G304800--Sobic007G218100 Sobic001G304800--Sobic003G246800 Sobic009G146250 Sobic009G146250 Sobic001G304800--Sobic009G146250 Sobic006G124400 Sobic006G124400 Sobic001G304800--Sobic006G124400 Sobic006G221300 Sobic006G221300 Sobic004G052200--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G052200--Sobic009G143200 Sobic009G077300 Sobic009G077300 Sobic004G052200--Sobic009G077300 Sobic001G054700 Sobic001G054700 Sobic004G052200--Sobic001G054700 Sobic004G052200--Sobic006G124400 Sobic004G052200--Sobic007G218100 Sobic004G052200--Sobic006G275500 Sobic004G052200--Sobic001G104500 Sobic004G052200--Sobic002G230800 Sobic001G238900 Sobic001G238900 Sobic002G230800--Sobic001G238900 Sobic010G105400 Sobic010G105400 Sobic002G230800--Sobic010G105400 Sobic002G230800--Sobic006G124400 Sobic002G230800--Sobic001G054700 Sobic003G179500 Sobic003G179500 Sobic002G230800--Sobic003G179500 Sobic002G230800--Sobic009G109300 Sobic002G230800--Sobic007G218100 Sobic002G246900 Sobic002G246900 Sobic002G230800--Sobic002G246900 Sobic003G244000 Sobic003G244000 Sobic002G230800--Sobic003G244000 Sobic003G246800--Sobic002G286700 Sobic003G246800--Sobic001G304800 Sobic003G246800--Sobic007G218100 Sobic003G246800--Sobic006G105600 Sobic003G246800--Sobic009G101100 Sobic010G024500 Sobic010G024500 Sobic003G246800--Sobic010G024500 Sobic008G190000 Sobic008G190000 Sobic003G246800--Sobic008G190000 Sobic003G246800--Sobic008G083500 Sobic003G246800--Sobic002G296000 Sobic006G016700 Sobic006G016700 Sobic006G275500--Sobic006G016700 Sobic006G275500--Sobic001G104500 Sobic002G168000 Sobic002G168000 Sobic006G275500--Sobic002G168000 Sobic006G275500--Sobic003G147500 Sobic007G187700 Sobic007G187700 Sobic006G275500--Sobic007G187700 Sobic008G090000 Sobic008G090000 Sobic006G275500--Sobic008G090000 Sobic006G275500--Sobic009G077300 Sobic006G094100 Sobic006G094100 Sobic006G275500--Sobic006G094100 Sobic006G275500--Sobic009G146250 Sobic004G273000 Sobic004G273000 Sobic002G392500--Sobic004G273000 Sobic002G392500--Sobic002G230800 Sobic002G392500--Sobic006G124400 Sobic010G261700 Sobic010G261700 Sobic002G392500--Sobic010G261700 Sobic002G392500--Sobic007G218100 Sobic007G027900 Sobic007G027900 Sobic002G392500--Sobic007G027900 Sobic002G392500--Sobic004G052200 Sobic010G227200 Sobic010G227200 Sobic002G392500--Sobic010G227200 Sobic010G191000 Sobic010G191000 Sobic002G392500--Sobic010G191000 Sobic004G282601 Sobic004G282601 Sobic001G104500--Sobic004G282601 Sobic001G104500--Sobic006G275500 Sobic001G104500--Sobic007G187700 Sobic004G317000 Sobic004G317000 Sobic001G104500--Sobic004G317000 Sobic002G256900 Sobic002G256900 Sobic001G104500--Sobic002G256900 Sobic001G104500--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic001G104500--Sobic002G055800 Sobic001G104500--Sobic006G016700 Sobic010G037901 Sobic010G037901 Sobic001G104500--Sobic010G037901 Sobic008G159901--Sobic006G124400 Sobic008G159901--Sobic001G054700 Sobic008G159901--Sobic004G052200 Sobic008G159901--Sobic006G221300 Sobic008G159901--Sobic007G218100 Sobic008G159901--Sobic009G077300 Sobic008G159901--Sobic004G273000 Sobic008G159901--Sobic006G275500 Sobic001G290500 Sobic001G290500 Sobic008G159901--Sobic001G290500
Octagon: transcription factors


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