Gene annotation
Transcriptome id Sobic.003G259300.1
Synonym Sb03g031350
Functional annotation serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed
UniProt C5XGS3
Pfam PF01603
Panther DB PTHR10257 PTHR10257:SF13
NCBI CDD -
KEGG Orthology K11584; serine/threonine-protein phosphatase 2A regulatory subunit B'
Gene Ontology GO:0007165; signal transduction GO:0000159protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT5G25510 : Protein phosphatase 2A regulatory B subunit family protein
RAP-DB (Rice) LOC_Os05g48150.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a044492
Brachypodium KQK04986
Barley HORVU1Hr1G084450.4 , HORVU1Hr1G084450.5 , HORVU1Hr1G084450.6 , HORVU1Hr1G084450.1 , HORVU1Hr1G084450.2 , HORVU1Hr1G084450.3
Wheat TraesCS1D02G390600 , TraesCS1A02G382900
Populus -


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cDNA sequences
Sobic.003G259300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
2 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
3 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
4 Sobic.009G127800 BZIP protein, putative, expressed -
5 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
6 Sobic.005G153000 agenet domain containing protein, expressed -
7 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
8 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
10 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
11 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
12 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
13 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
14 Sobic.006G221300 expressed protein -
15 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
16 Sobic.005G157300 protein binding protein, putative, expressed -
17 Sobic.010G177100 expressed protein -
18 Sobic.006G142500 protein kinase, putative, expressed -
19 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
20 Sobic.008G118100 kelch repeat protein, putative, expressed -


Gene co-expression network
sample Sobic003G259300 Sobic003G259300 Sobic001G425700 Sobic001G425700 Sobic003G259300--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic003G259300--Sobic009G225500 Sobic002G006100 Sobic002G006100 Sobic003G259300--Sobic002G006100 Sobic009G127800 Sobic009G127800 Sobic003G259300--Sobic009G127800 Sobic006G272800 Sobic006G272800 Sobic003G259300--Sobic006G272800 Sobic005G153000 Sobic005G153000 Sobic003G259300--Sobic005G153000 Sobic001G054700 Sobic001G054700 Sobic003G259300--Sobic001G054700 Sobic004G234500 Sobic004G234500 Sobic003G259300--Sobic004G234500 Sobic003G226700 Sobic003G226700 Sobic003G259300--Sobic003G226700 Sobic001G425700--Sobic003G259300 Sobic001G425700--Sobic003G226700 Sobic001G425700--Sobic002G006100 Sobic003G024000 Sobic003G024000 Sobic001G425700--Sobic003G024000 Sobic003G104100 Sobic003G104100 Sobic001G425700--Sobic003G104100 Sobic004G164700 Sobic004G164700 Sobic001G425700--Sobic004G164700 Sobic001G425700--Sobic009G225500 Sobic006G281900 Sobic006G281900 Sobic001G425700--Sobic006G281900 Sobic001G425700--Sobic009G127800 Sobic009G225500--Sobic009G127800 Sobic009G225500--Sobic003G259300 Sobic006G142500 Sobic006G142500 Sobic009G225500--Sobic006G142500 Sobic006G221300 Sobic006G221300 Sobic009G225500--Sobic006G221300 Sobic010G086000 Sobic010G086000 Sobic009G225500--Sobic010G086000 Sobic009G225500--Sobic001G425700 Sobic004G179800 Sobic004G179800 Sobic009G225500--Sobic004G179800 Sobic009G225500--Sobic006G272800 Sobic009G225500--Sobic006G281900 Sobic002G027600 Sobic002G027600 Sobic002G006100--Sobic002G027600 Sobic002G006100--Sobic003G259300 Sobic002G006100--Sobic006G272800 Sobic003G351900 Sobic003G351900 Sobic002G006100--Sobic003G351900 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G284100 Sobic002G284100 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic002G006100--Sobic009G225500 Sobic009G127800--Sobic006G221300 Sobic009G127800--Sobic009G225500 Sobic009G127800--Sobic001G054700 Sobic009G127800--Sobic006G142500 Sobic008G052300 Sobic008G052300 Sobic009G127800--Sobic008G052300 Sobic002G279400 Sobic002G279400 Sobic009G127800--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic009G127800--Sobic007G162400 Sobic009G127800--Sobic002G027600 Sobic005G157300 Sobic005G157300 Sobic009G127800--Sobic005G157300 Sobic006G272800--Sobic002G284100 Sobic006G272800--Sobic002G027600 Sobic004G267600 Sobic004G267600 Sobic006G272800--Sobic004G267600 Sobic008G070700 Sobic008G070700 Sobic006G272800--Sobic008G070700 Sobic005G032600 Sobic005G032600 Sobic006G272800--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic006G272800--Sobic001G468000 Sobic006G272800--Sobic002G006100 Sobic006G272800--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic006G272800--Sobic001G158300 Sobic009G077300 Sobic009G077300 Sobic005G153000--Sobic009G077300 Sobic002G168000 Sobic002G168000 Sobic005G153000--Sobic002G168000 Sobic004G282601 Sobic004G282601 Sobic005G153000--Sobic004G282601 Sobic010G037901 Sobic010G037901 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic007G187700 Sobic007G187700 Sobic005G153000--Sobic007G187700 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600 Sobic001G054700--Sobic006G221300 Sobic001G054700--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic001G054700--Sobic004G108400 Sobic009G143200 Sobic009G143200 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic001G054700--Sobic009G127800 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic010G023400 Sobic010G023400 Sobic004G234500--Sobic010G023400 Sobic004G234500--Sobic006G142500 Sobic004G234500--Sobic010G086000 Sobic004G246500 Sobic004G246500 Sobic004G234500--Sobic004G246500 Sobic004G234500--Sobic004G267600 Sobic004G234500--Sobic009G127800 Sobic006G274200 Sobic006G274200 Sobic004G234500--Sobic006G274200 Sobic004G234500--Sobic002G027600 Sobic002G317700 Sobic002G317700 Sobic004G234500--Sobic002G317700 Sobic007G084200 Sobic007G084200 Sobic003G226700--Sobic007G084200 Sobic003G420300 Sobic003G420300 Sobic003G226700--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic003G226700--Sobic003G292700 Sobic003G226700--Sobic001G425700 Sobic003G289800 Sobic003G289800 Sobic003G226700--Sobic003G289800 Sobic009G212100 Sobic009G212100 Sobic003G226700--Sobic009G212100 Sobic001G487200 Sobic001G487200 Sobic003G226700--Sobic001G487200 Sobic004G315700 Sobic004G315700 Sobic003G226700--Sobic004G315700 Sobic003G226700--Sobic003G024000
Octagon: transcription factors


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