Gene annotation
Transcriptome id Sobic.006G262501.1
Synonym -
Functional annotation -
UniProt A0A1Z5RFM4
Pfam -
Panther DB PTHR32263 PTHR32263:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g57640.1 : RCD1, putative, expressed
MaizeGDB (Corn) Zm00025a033246
Brachypodium PNT77468 , PNT77469 , KQK21831 , PNT77471 , PNT77470
Barley -
Wheat TraesCS7B02G309100 , TraesCS7B02G309100 , TraesCS7B02G309100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G045700 PHD-finger family protein, expressed -
2 Sobic.002G127900 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
3 Sobic.005G036200 protein of unknown function containing protein, expressed -
4 Sobic.008G118100 kelch repeat protein, putative, expressed -
5 Sobic.003G368901 - -
6 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
8 Sobic.005G139300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amidase, putative, expressed -
9 Sobic.010G175000 expressed protein -
10 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
11 Sobic.007G082000 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.007G194500 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
14 Sobic.007G050900 - -
15 Sobic.006G226000 expressed protein -
16 Sobic.001G264201 - -
17 Sobic.010G264900 OsFBX79 - F-box domain containing protein, expressed -
18 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
19 Sobic.009G045300 OsFBL21 - F-box domain and LRR containing protein, expressed K14485: transport inhibitor response 1
20 Sobic.004G286200 DUF630/DUF632 domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G262501 Sobic006G262501 Sobic005G045700 Sobic005G045700 Sobic006G262501--Sobic005G045700 Sobic002G127900 Sobic002G127900 Sobic006G262501--Sobic002G127900 Sobic005G036200 Sobic005G036200 Sobic006G262501--Sobic005G036200 Sobic008G118100 Sobic008G118100 Sobic006G262501--Sobic008G118100 Sobic003G368901 Sobic003G368901 Sobic006G262501--Sobic003G368901 Sobic009G012600 Sobic009G012600 Sobic006G262501--Sobic009G012600 Sobic007G050800 Sobic007G050800 Sobic006G262501--Sobic007G050800 Sobic005G139300 Sobic005G139300 Sobic006G262501--Sobic005G139300 Sobic010G175000 Sobic010G175000 Sobic006G262501--Sobic010G175000 Sobic005G045700--Sobic002G127900 Sobic007G053100 Sobic007G053100 Sobic005G045700--Sobic007G053100 Sobic002G266300 Sobic002G266300 Sobic005G045700--Sobic002G266300 Sobic002G054400 Sobic002G054400 Sobic005G045700--Sobic002G054400 Sobic005G045700--Sobic003G368901 Sobic001G125300 Sobic001G125300 Sobic005G045700--Sobic001G125300 Sobic005G045700--Sobic009G012600 Sobic008G191850 Sobic008G191850 Sobic005G045700--Sobic008G191850 Sobic005G045700--Sobic006G262501 Sobic002G127900--Sobic005G045700 Sobic008G165300 Sobic008G165300 Sobic002G127900--Sobic008G165300 Sobic002G127900--Sobic007G053100 Sobic002G127900--Sobic003G368901 Sobic002G127900--Sobic002G266300 Sobic002G127900--Sobic006G262501 Sobic010G264900 Sobic010G264900 Sobic002G127900--Sobic010G264900 Sobic009G155900 Sobic009G155900 Sobic002G127900--Sobic009G155900 Sobic002G127900--Sobic001G125300 Sobic007G192200 Sobic007G192200 Sobic005G036200--Sobic007G192200 Sobic002G420400 Sobic002G420400 Sobic005G036200--Sobic002G420400 Sobic009G002200 Sobic009G002200 Sobic005G036200--Sobic009G002200 Sobic001G375800 Sobic001G375800 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic001G456400 Sobic001G456400 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic004G242200 Sobic004G242200 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic008G118100--Sobic007G050800 Sobic002G187600 Sobic002G187600 Sobic008G118100--Sobic002G187600 Sobic004G286200 Sobic004G286200 Sobic008G118100--Sobic004G286200 Sobic006G281900 Sobic006G281900 Sobic008G118100--Sobic006G281900 Sobic009G225500 Sobic009G225500 Sobic008G118100--Sobic009G225500 Sobic002G095300 Sobic002G095300 Sobic008G118100--Sobic002G095300 Sobic008G118100--Sobic009G002200 Sobic008G090400 Sobic008G090400 Sobic008G118100--Sobic008G090400 Sobic005G157300 Sobic005G157300 Sobic008G118100--Sobic005G157300 Sobic003G368901--Sobic005G045700 Sobic003G368901--Sobic002G127900 Sobic003G368901--Sobic006G262501 Sobic003G368901--Sobic008G165300 Sobic003G368901--Sobic005G139300 Sobic003G368901--Sobic010G264900 Sobic004G031300 Sobic004G031300 Sobic003G368901--Sobic004G031300 Sobic003G368901--Sobic002G266300 Sobic003G368901--Sobic007G053100 Sobic009G012600--Sobic007G050800 Sobic009G012600--Sobic005G045700 Sobic006G226000 Sobic006G226000 Sobic009G012600--Sobic006G226000 Sobic009G012600--Sobic007G192200 Sobic009G012600--Sobic009G002200 Sobic009G012600--Sobic005G036200 Sobic010G037901 Sobic010G037901 Sobic009G012600--Sobic010G037901 Sobic009G012600--Sobic006G262501 Sobic009G012600--Sobic008G191850 Sobic007G050800--Sobic009G002200 Sobic006G016700 Sobic006G016700 Sobic007G050800--Sobic006G016700 Sobic007G050800--Sobic008G118100 Sobic007G050800--Sobic006G226000 Sobic002G168000 Sobic002G168000 Sobic007G050800--Sobic002G168000 Sobic005G153000 Sobic005G153000 Sobic007G050800--Sobic005G153000 Sobic006G135800 Sobic006G135800 Sobic007G050800--Sobic006G135800 Sobic007G187700 Sobic007G187700 Sobic007G050800--Sobic007G187700 Sobic007G050800--Sobic009G012600 Sobic007G050900 Sobic007G050900 Sobic005G139300--Sobic007G050900 Sobic005G139300--Sobic007G053100 Sobic003G419500 Sobic003G419500 Sobic005G139300--Sobic003G419500 Sobic009G060600 Sobic009G060600 Sobic005G139300--Sobic009G060600 Sobic005G139300--Sobic005G045700 Sobic005G139300--Sobic002G266300 Sobic005G139300--Sobic009G250500 Sobic002G010000 Sobic002G010000 Sobic005G139300--Sobic002G010000 Sobic005G139300--Sobic005G036200 Sobic004G192500 Sobic004G192500 Sobic010G175000--Sobic004G192500 Sobic010G257000 Sobic010G257000 Sobic010G175000--Sobic010G257000 Sobic010G175000--Sobic006G226000 Sobic009G188900 Sobic009G188900 Sobic010G175000--Sobic009G188900 Sobic010G175000--Sobic006G281900 Sobic006G275500 Sobic006G275500 Sobic010G175000--Sobic006G275500 Sobic010G175000--Sobic006G016700 Sobic010G175000--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic010G175000--Sobic002G055800
Octagon: transcription factors


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