Gene annotation
Transcriptome id Sobic.007G192200.1
Synonym Sb07g026120, LTPG1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5YHR7
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27950 : glycosylphosphatidylinositol-anchored lipid protein transfer 1
RAP-DB (Rice) LOC_Os08g42040.1 : LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a005278 , Zm00025a030414
Brachypodium KQJ99139
Barley HORVU7Hr1G054530.1
Wheat -
Populus -


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cDNA sequences
Sobic.007G192200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G036200 protein of unknown function containing protein, expressed -
2 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.003G140800 expressed protein -
4 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
5 Sobic.006G226000 expressed protein -
6 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
8 Sobic.005G102800 OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
9 Sobic.009G031800 - -
10 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.008G175400 U-box domain-containing protein, putative, expressed -
12 Sobic.009G233000 homeobox domain containing protein, expressed -
13 Sobic.008G178533 - -
14 Sobic.010G214800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.001G125300 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
16 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
17 Sobic.010G152000 powdery mildew resistant protein 5, putative, expressed -
18 Sobic.010G037901 - -
19 Sobic.009G250500 expressed protein -
20 Sobic.002G366300 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic007G192200 Sobic007G192200 Sobic005G036200 Sobic005G036200 Sobic007G192200--Sobic005G036200 Sobic006G135800 Sobic006G135800 Sobic007G192200--Sobic006G135800 Sobic003G140800 Sobic003G140800 Sobic007G192200--Sobic003G140800 Sobic009G002200 Sobic009G002200 Sobic007G192200--Sobic009G002200 Sobic006G226000 Sobic006G226000 Sobic007G192200--Sobic006G226000 Sobic009G012600 Sobic009G012600 Sobic007G192200--Sobic009G012600 Sobic004G242200 Sobic004G242200 Sobic007G192200--Sobic004G242200 Sobic005G102800 Sobic005G102800 Sobic007G192200--Sobic005G102800 Sobic009G031800 Sobic009G031800 Sobic007G192200--Sobic009G031800 Sobic005G036200--Sobic007G192200 Sobic002G420400 Sobic002G420400 Sobic005G036200--Sobic002G420400 Sobic005G036200--Sobic009G002200 Sobic001G375800 Sobic001G375800 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic001G456400 Sobic001G456400 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic001G493100 Sobic001G493100 Sobic006G135800--Sobic001G493100 Sobic010G037901 Sobic010G037901 Sobic006G135800--Sobic010G037901 Sobic006G135800--Sobic006G226000 Sobic006G172000 Sobic006G172000 Sobic006G135800--Sobic006G172000 Sobic006G135800--Sobic009G002200 Sobic005G153000 Sobic005G153000 Sobic006G135800--Sobic005G153000 Sobic006G135800--Sobic007G192200 Sobic006G135800--Sobic009G031800 Sobic007G160400 Sobic007G160400 Sobic006G135800--Sobic007G160400 Sobic010G074940 Sobic010G074940 Sobic003G140800--Sobic010G074940 Sobic001G544400 Sobic001G544400 Sobic003G140800--Sobic001G544400 Sobic002G393100 Sobic002G393100 Sobic003G140800--Sobic002G393100 Sobic001G136400 Sobic001G136400 Sobic003G140800--Sobic001G136400 Sobic001G380800 Sobic001G380800 Sobic003G140800--Sobic001G380800 Sobic004G164800 Sobic004G164800 Sobic003G140800--Sobic004G164800 Sobic005G147600 Sobic005G147600 Sobic003G140800--Sobic005G147600 Sobic004G301800 Sobic004G301800 Sobic003G140800--Sobic004G301800 Sobic001G208500 Sobic001G208500 Sobic003G140800--Sobic001G208500 Sobic007G050800 Sobic007G050800 Sobic009G002200--Sobic007G050800 Sobic003G290400 Sobic003G290400 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic009G002200--Sobic006G135800 Sobic009G002200--Sobic005G036200 Sobic009G002200--Sobic005G153000 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic009G002200--Sobic010G037901 Sobic006G226000--Sobic009G031800 Sobic006G226000--Sobic007G160400 Sobic006G226000--Sobic010G037901 Sobic002G055800 Sobic002G055800 Sobic006G226000--Sobic002G055800 Sobic002G256900 Sobic002G256900 Sobic006G226000--Sobic002G256900 Sobic004G123200 Sobic004G123200 Sobic006G226000--Sobic004G123200 Sobic003G086800 Sobic003G086800 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic006G226000--Sobic001G136400 Sobic009G012600--Sobic007G050800 Sobic005G045700 Sobic005G045700 Sobic009G012600--Sobic005G045700 Sobic009G012600--Sobic006G226000 Sobic009G012600--Sobic007G192200 Sobic009G012600--Sobic009G002200 Sobic009G012600--Sobic005G036200 Sobic009G012600--Sobic010G037901 Sobic006G262501 Sobic006G262501 Sobic009G012600--Sobic006G262501 Sobic008G191850 Sobic008G191850 Sobic009G012600--Sobic008G191850 Sobic004G242200--Sobic002G420400 Sobic004G242200--Sobic001G456400 Sobic004G242200--Sobic005G036200 Sobic004G242200--Sobic009G002200 Sobic004G242200--Sobic001G375800 Sobic004G242200--Sobic007G192200 Sobic004G339900 Sobic004G339900 Sobic004G242200--Sobic004G339900 Sobic010G152000 Sobic010G152000 Sobic004G242200--Sobic010G152000 Sobic004G071050 Sobic004G071050 Sobic004G242200--Sobic004G071050 Sobic003G102700 Sobic003G102700 Sobic005G102800--Sobic003G102700 Sobic005G102800--Sobic007G192200 Sobic004G269100 Sobic004G269100 Sobic005G102800--Sobic004G269100 Sobic005G102800--Sobic006G226000 Sobic009G119800 Sobic009G119800 Sobic005G102800--Sobic009G119800 Sobic005G102800--Sobic003G140800 Sobic001G381000 Sobic001G381000 Sobic005G102800--Sobic001G381000 Sobic004G244200 Sobic004G244200 Sobic005G102800--Sobic004G244200 Sobic005G102800--Sobic009G031800 Sobic009G031800--Sobic006G226000 Sobic009G031800--Sobic007G160400 Sobic009G031800--Sobic010G037901 Sobic009G012500 Sobic009G012500 Sobic009G031800--Sobic009G012500 Sobic005G126701 Sobic005G126701 Sobic009G031800--Sobic005G126701 Sobic001G254700 Sobic001G254700 Sobic009G031800--Sobic001G254700 Sobic006G083900 Sobic006G083900 Sobic009G031800--Sobic006G083900 Sobic007G025600 Sobic007G025600 Sobic009G031800--Sobic007G025600 Sobic001G534200 Sobic001G534200 Sobic009G031800--Sobic001G534200
Octagon: transcription factors


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