Gene annotation
| Transcriptome id | Sobic.001G125300.1 |
|---|---|
| Synonym | CKR1, EIN2, ORE2, ORE3, PIR2, ATEIN2, ERA3, Sb01g011020 |
| Functional annotation | ethylene-insensitive protein, putative, expressed |
| UniProt | A0A1B6QIP3 |
| Pfam | PF01566 |
| Panther DB | PTHR11706 PTHR11706:SF44 |
| NCBI CDD | KOG1291; Mn2+ and Fe2+ transporters of the NRAMP family |
| KEGG Orthology | K14513; ethylene-insensitive protein 2 |
| Gene Ontology | GO:0016020; membrane GO:0006810transport GO:0005215transporter activity |
Orthologs (automatic annotation)
| TAIR | AT5G03280 : NRAMP metal ion transporter family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os03g49400.1 : ethylene-insensitive protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a007730 |
| Brachypodium | PNT74272 , PNT74273 , PNT74270 , PNT74271 , KQJ86905 |
| Barley | - |
| Wheat | TraesCS5D02G166000 , TraesCS5D02G166000 , TraesCS5D02G166000 , TraesCS4A02G275600 , TraesCS5B02G158500 , TraesCS5A02G161200 , TraesCS5A02G161200 , TraesCS5A02G161200 , TraesCS5A02G161200 , TraesCS4B02G038100 , TraesCS4B02G381200 , TraesCS2B02G133000 , TraesCS4D02G036000 , TraesCS4D02G036000 , TraesCS4D02G036000 |
| Populus | - |
JBrowse
| Sobic.001G125300 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G098800 | osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed | - |
| 2 | Sobic.003G437400 | The major cationic peroxidase in sorghum grain (SPC4)(PubMedID : 16650004)@peroxidase precursor, putative, expressed | K00430: peroxidase |
| 3 | Sobic.001G380800 | cupin domain containing protein, expressed | - |
| 4 | Sobic.004G301800 | vacuolar-processing enzyme precursor, putative, expressed | K01369: legumain |
| 5 | Sobic.003G295600 | DUF1264 domain containing protein, putative, expressed | - |
| 6 | Sobic.002G393100 | dehydrogenase/reductase, putative, expressed | - |
| 7 | Sobic.010G131500 | -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed | - |
| 8 | Sobic.010G142900 | oleosin, putative, expressed | - |
| 9 | Sobic.006G053200 | - | - |
| 10 | Sobic.001G418500 | glyoxalase family protein, putative, expressed | - |
| 11 | Sobic.003G283700 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1264 domain containing protein, putative, expressed | - |
| 12 | Sobic.001G544400 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@oleosin, putative, expressed | - |
| 13 | Sobic.010G074940 | - | - |
| 14 | Sobic.004G164800 | poly synthetase 3, putative, expressed | K10798: poly [ADP-ribose] polymerase 2/3/4 |
| 15 | Sobic.003G051400 | cytochrome c oxidase polypeptide Vc, putative, expressed | - |
| 16 | Sobic.006G248100 | lipase, putative, expressed | - |
| 17 | Sobic.001G208500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed | K09873: aquaporin TIP |
| 18 | Sobic.002G401400 | glyoxalase family protein, putative, expressed | - |
| 19 | Sobic.002G391100 | Thioredoxin peroxidase (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed | K11188: peroxiredoxin 6 |
| 20 | Sobic.004G281700 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DUF1264 domain containing protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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