Gene annotation
Transcriptome id Sobic.006G053200.2,Sobic.006G053200.1
Synonym YSL6, Sb06g013970
Functional annotation -
UniProt A0A1Z5RCG5 , A0A1Z5RDE6
Pfam PF03169
Panther DB PTHR31645 PTHR31645:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27020 : YELLOW STRIPE like 6
RAP-DB (Rice) LOC_Os04g32060.2 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a020927 , Zm00025a011745 , Zm00025a011747 , Zm00025a035063
Brachypodium PNT60923
Barley HORVU2Hr1G070320.2 , HORVU2Hr1G070320.1 , HORVU2Hr1G070320.6 , HORVU2Hr1G070320.7 , HORVU2Hr1G070320.4 , HORVU2Hr1G070320.5 , HORVU2Hr1G070320.8 , HORVU2Hr1G070320.9 , HORVU2Hr1G070320.10 , HORVU2Hr1G070320.11 , HORVU2Hr1G070320.12 , HORVU2Hr1G070320.13 , HORVU2Hr1G070320.14 , HORVU2Hr1G070320.15 , HORVU2Hr1G070320.17 , HORVU2Hr1G070320.18 , HORVU2Hr1G070320.19 , HORVU2Hr1G070320.24 , HORVU2Hr1G070320.27 , HORVU2Hr1G070320.26 , HORVU2Hr1G070320.23 , HORVU2Hr1G070320.22
Wheat TraesCS6D02G214100 , TraesCS2A02G284900 , TraesCS2B02G302000 , TraesCS2D02G425500 , TraesCS6A02G221100 , TraesCS2D02G283600 , TraesCS2D02G283600 , TraesCS2B02G447900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
2 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
3 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
4 Sobic.008G159000 - -
5 Sobic.002G197700 -(PubMedID : 23108465)@ZOS4-05 - C2H2 zinc finger protein, expressed -
6 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
7 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
8 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
9 Sobic.006G055900 expressed protein -
10 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
11 Sobic.003G395000 cysteine proteinase EP-B 1 precursor, putative, expressed -
12 Sobic.001G380800 cupin domain containing protein, expressed -
13 Sobic.002G184700 expressed protein -
14 Sobic.006G167700 oleosin, putative, expressed -
15 Sobic.002G401400 glyoxalase family protein, putative, expressed -
16 Sobic.009G025500 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed -
17 Sobic.005G147600 - -
18 Sobic.001G165600 THION1 - Plant thionin family protein precursor, putative, expressed -
19 Sobic.001G344300 - -
20 Sobic.006G248100 lipase, putative, expressed -


Gene co-expression network
sample Sobic006G053200 Sobic006G053200 Sobic004G164800 Sobic004G164800 Sobic006G053200--Sobic004G164800 Sobic001G208500 Sobic001G208500 Sobic006G053200--Sobic001G208500 Sobic002G393100 Sobic002G393100 Sobic006G053200--Sobic002G393100 Sobic008G159000 Sobic008G159000 Sobic006G053200--Sobic008G159000 Sobic002G197700 Sobic002G197700 Sobic006G053200--Sobic002G197700 Sobic009G037100 Sobic009G037100 Sobic006G053200--Sobic009G037100 Sobic002G211300 Sobic002G211300 Sobic006G053200--Sobic002G211300 Sobic003G372600 Sobic003G372600 Sobic006G053200--Sobic003G372600 Sobic006G055900 Sobic006G055900 Sobic006G053200--Sobic006G055900 Sobic004G164800--Sobic009G037100 Sobic004G164800--Sobic002G393100 Sobic004G164800--Sobic001G208500 Sobic004G164800--Sobic003G372600 Sobic004G164800--Sobic002G211300 Sobic004G164800--Sobic008G159000 Sobic004G164800--Sobic002G197700 Sobic010G125000 Sobic010G125000 Sobic004G164800--Sobic010G125000 Sobic006G248100 Sobic006G248100 Sobic004G164800--Sobic006G248100 Sobic001G208500--Sobic003G372600 Sobic001G208500--Sobic002G393100 Sobic001G208500--Sobic004G164800 Sobic001G208500--Sobic002G211300 Sobic001G208500--Sobic008G159000 Sobic002G184700 Sobic002G184700 Sobic001G208500--Sobic002G184700 Sobic001G208500--Sobic009G037100 Sobic001G208500--Sobic006G248100 Sobic001G208500--Sobic002G197700 Sobic002G393100--Sobic001G208500 Sobic002G393100--Sobic004G164800 Sobic002G393100--Sobic002G197700 Sobic002G393100--Sobic003G372600 Sobic002G393100--Sobic009G037100 Sobic002G393100--Sobic008G159000 Sobic002G393100--Sobic006G248100 Sobic002G393100--Sobic002G211300 Sobic001G380800 Sobic001G380800 Sobic002G393100--Sobic001G380800 Sobic008G159000--Sobic002G197700 Sobic008G159000--Sobic004G164800 Sobic008G159000--Sobic002G211300 Sobic008G159000--Sobic001G208500 Sobic008G159000--Sobic003G372600 Sobic008G159000--Sobic009G037100 Sobic008G159000--Sobic010G125000 Sobic008G159000--Sobic002G393100 Sobic008G159000--Sobic002G184700 Sobic002G197700--Sobic008G159000 Sobic002G197700--Sobic002G211300 Sobic002G197700--Sobic010G125000 Sobic002G197700--Sobic002G393100 Sobic002G197700--Sobic004G164800 Sobic002G197700--Sobic001G208500 Sobic002G197700--Sobic003G372600 Sobic001G165600 Sobic001G165600 Sobic002G197700--Sobic001G165600 Sobic002G197700--Sobic009G037100 Sobic009G037100--Sobic004G164800 Sobic009G037100--Sobic003G372600 Sobic009G037100--Sobic008G159000 Sobic009G037100--Sobic001G208500 Sobic009G037100--Sobic002G211300 Sobic009G037100--Sobic002G393100 Sobic009G037100--Sobic010G125000 Sobic005G165700 Sobic005G165700 Sobic009G037100--Sobic005G165700 Sobic009G037100--Sobic002G197700 Sobic002G211300--Sobic010G125000 Sobic002G211300--Sobic003G372600 Sobic006G248000 Sobic006G248000 Sobic002G211300--Sobic006G248000 Sobic006G167700 Sobic006G167700 Sobic002G211300--Sobic006G167700 Sobic002G211300--Sobic001G208500 Sobic002G211300--Sobic001G165600 Sobic002G211300--Sobic002G197700 Sobic002G211300--Sobic004G164800 Sobic002G211300--Sobic008G159000 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic003G372600--Sobic002G184700 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic002G046000 Sobic002G046000 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic003G372600--Sobic006G167700 Sobic003G372600--Sobic009G037100 Sobic006G055900--Sobic002G393100 Sobic003G395000 Sobic003G395000 Sobic006G055900--Sobic003G395000 Sobic006G055900--Sobic004G164800 Sobic006G055900--Sobic008G159000 Sobic006G055900--Sobic002G197700 Sobic006G055900--Sobic009G037100 Sobic006G055900--Sobic001G208500 Sobic002G401400 Sobic002G401400 Sobic006G055900--Sobic002G401400 Sobic006G055900--Sobic001G380800
Octagon: transcription factors


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