Gene annotation
Transcriptome id Sobic.010G264900.3,Sobic.010G264900.4,Sobic.010G264900.2,Sobic.010G264900.5,Sobic.010G264900.1,Sobic.010G264900.6
Synonym
Functional annotation OsFBX79 - F-box domain containing protein, expressed
UniProt C5Z1Z0 , A0A194YLL4
Pfam -
Panther DB PTHR32212 PTHR32212:SF118
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52680 : F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os03g11790.1,LOC_Os03g10540.2 : OsFBX78 - F-box domain containing protein, expressed,OsFBX79 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6D02G053300 , TraesCS5A02G085700 , TraesCS5A02G085700 , TraesCS5A02G085700 , TraesCS6A02G046200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G045700 PHD-finger family protein, expressed -
2 Sobic.002G127900 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
3 Sobic.003G368901 - -
4 Sobic.004G010500 OsFBX52 - F-box domain containing protein, expressed -
5 Sobic.006G262501 - -
6 Sobic.008G165266 - -
7 Sobic.010G003900 arginine N-methyltransferase 7, putative, expressed K11438: type III protein arginine methyltransferase
8 Sobic.009G224300 expressed protein -
9 Sobic.009G155900 hhH-GPD superfamily base excision DNA repair protein, expressed -
10 Sobic.003G214700 transcriptional corepressor LEUNIG, putative, expressed -
11 Sobic.007G014800 RNA recognition motif containing protein, putative, expressed -
12 Sobic.008G165300 Protein kinase domain containing protein, expressed -
13 Sobic.004G286200 DUF630/DUF632 domains containing protein, putative, expressed -
14 Sobic.003G396700 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer
15 Sobic.007G102500 - -
16 Sobic.003G433300 DNA mismatch repair protein Mlh1, putative, expressed K08734: DNA mismatch repair protein MLH1
17 Sobic.003G123100 expressed protein K03352: anaphase-promoting complex subunit 5
18 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
19 Sobic.001G098400 expressed protein K16278: E3 ubiquitin-protein ligase HOS1
20 Sobic.004G031300 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G264900 Sobic010G264900 Sobic005G045700 Sobic005G045700 Sobic010G264900--Sobic005G045700 Sobic002G127900 Sobic002G127900 Sobic010G264900--Sobic002G127900 Sobic003G368901 Sobic003G368901 Sobic010G264900--Sobic003G368901 Sobic004G010500 Sobic004G010500 Sobic010G264900--Sobic004G010500 Sobic006G262501 Sobic006G262501 Sobic010G264900--Sobic006G262501 Sobic008G165266 Sobic008G165266 Sobic010G264900--Sobic008G165266 Sobic010G003900 Sobic010G003900 Sobic010G264900--Sobic010G003900 Sobic009G224300 Sobic009G224300 Sobic010G264900--Sobic009G224300 Sobic009G155900 Sobic009G155900 Sobic010G264900--Sobic009G155900 Sobic005G045700--Sobic002G127900 Sobic007G053100 Sobic007G053100 Sobic005G045700--Sobic007G053100 Sobic002G266300 Sobic002G266300 Sobic005G045700--Sobic002G266300 Sobic002G054400 Sobic002G054400 Sobic005G045700--Sobic002G054400 Sobic005G045700--Sobic003G368901 Sobic001G125300 Sobic001G125300 Sobic005G045700--Sobic001G125300 Sobic009G012600 Sobic009G012600 Sobic005G045700--Sobic009G012600 Sobic008G191850 Sobic008G191850 Sobic005G045700--Sobic008G191850 Sobic005G045700--Sobic006G262501 Sobic002G127900--Sobic005G045700 Sobic008G165300 Sobic008G165300 Sobic002G127900--Sobic008G165300 Sobic002G127900--Sobic007G053100 Sobic002G127900--Sobic003G368901 Sobic002G127900--Sobic002G266300 Sobic002G127900--Sobic006G262501 Sobic002G127900--Sobic010G264900 Sobic002G127900--Sobic009G155900 Sobic002G127900--Sobic001G125300 Sobic003G368901--Sobic005G045700 Sobic003G368901--Sobic002G127900 Sobic003G368901--Sobic006G262501 Sobic003G368901--Sobic008G165300 Sobic005G139300 Sobic005G139300 Sobic003G368901--Sobic005G139300 Sobic003G368901--Sobic010G264900 Sobic004G031300 Sobic004G031300 Sobic003G368901--Sobic004G031300 Sobic003G368901--Sobic002G266300 Sobic003G368901--Sobic007G053100 Sobic001G346900 Sobic001G346900 Sobic004G010500--Sobic001G346900 Sobic007G102500 Sobic007G102500 Sobic004G010500--Sobic007G102500 Sobic004G010500--Sobic002G127900 Sobic005G108000 Sobic005G108000 Sobic004G010500--Sobic005G108000 Sobic004G010500--Sobic005G045700 Sobic004G010500--Sobic010G264900 Sobic002G252100 Sobic002G252100 Sobic004G010500--Sobic002G252100 Sobic002G127200 Sobic002G127200 Sobic004G010500--Sobic002G127200 Sobic006G245900 Sobic006G245900 Sobic004G010500--Sobic006G245900 Sobic006G262501--Sobic005G045700 Sobic006G262501--Sobic002G127900 Sobic005G036200 Sobic005G036200 Sobic006G262501--Sobic005G036200 Sobic008G118100 Sobic008G118100 Sobic006G262501--Sobic008G118100 Sobic006G262501--Sobic003G368901 Sobic006G262501--Sobic009G012600 Sobic007G050800 Sobic007G050800 Sobic006G262501--Sobic007G050800 Sobic006G262501--Sobic005G139300 Sobic010G175000 Sobic010G175000 Sobic006G262501--Sobic010G175000 Sobic005G138000 Sobic005G138000 Sobic008G165266--Sobic005G138000 Sobic008G165266--Sobic008G165300 Sobic003G434300 Sobic003G434300 Sobic008G165266--Sobic003G434300 Sobic008G165266--Sobic001G125300 Sobic006G083900 Sobic006G083900 Sobic008G165266--Sobic006G083900 Sobic008G165266--Sobic002G127900 Sobic001G534200 Sobic001G534200 Sobic008G165266--Sobic001G534200 Sobic001G125400 Sobic001G125400 Sobic008G165266--Sobic001G125400 Sobic010G179300 Sobic010G179300 Sobic008G165266--Sobic010G179300 Sobic006G125500 Sobic006G125500 Sobic010G003900--Sobic006G125500 Sobic006G237000 Sobic006G237000 Sobic010G003900--Sobic006G237000 Sobic010G003900--Sobic004G031300 Sobic005G098800 Sobic005G098800 Sobic010G003900--Sobic005G098800 Sobic006G140400 Sobic006G140400 Sobic010G003900--Sobic006G140400 Sobic001G200200 Sobic001G200200 Sobic010G003900--Sobic001G200200 Sobic001G004100 Sobic001G004100 Sobic010G003900--Sobic001G004100 Sobic009G246500 Sobic009G246500 Sobic010G003900--Sobic009G246500 Sobic005G000300 Sobic005G000300 Sobic010G003900--Sobic005G000300 Sobic003G147500 Sobic003G147500 Sobic009G224300--Sobic003G147500 Sobic006G016700 Sobic006G016700 Sobic009G224300--Sobic006G016700 Sobic004G286200 Sobic004G286200 Sobic009G224300--Sobic004G286200 Sobic001G493100 Sobic001G493100 Sobic009G224300--Sobic001G493100 Sobic007G219100 Sobic007G219100 Sobic009G224300--Sobic007G219100 Sobic009G207400 Sobic009G207400 Sobic009G224300--Sobic009G207400 Sobic003G350400 Sobic003G350400 Sobic009G224300--Sobic003G350400 Sobic007G082000 Sobic007G082000 Sobic009G224300--Sobic007G082000 Sobic010G257000 Sobic010G257000 Sobic009G224300--Sobic010G257000 Sobic009G155900--Sobic008G165300 Sobic009G155900--Sobic002G127900 Sobic009G155900--Sobic008G165266 Sobic002G429700 Sobic002G429700 Sobic009G155900--Sobic002G429700 Sobic009G155900--Sobic009G224300 Sobic009G155900--Sobic005G138000 Sobic004G248700 Sobic004G248700 Sobic009G155900--Sobic004G248700 Sobic009G155900--Sobic003G434300 Sobic009G155900--Sobic002G266300
Octagon: transcription factors


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