Gene annotation
Transcriptome id Sobic.003G214700.1
Synonym LUG, RON2
Functional annotation transcriptional corepressor LEUNIG, putative, expressed
UniProt A0A1B6Q4P5
Pfam PF08513 PF00400
Panther DB PTHR22847 PTHR22847:SF419
NCBI CDD KOG0266; WD40 repeat-containing protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G32551 : LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
RAP-DB (Rice) LOC_Os01g42260.1 : transcriptional corepressor LEUNIG, putative, expressed
MaizeGDB (Corn) Zm00025a028677 , Zm00025a028666
Brachypodium KQK08663
Barley HORVU3Hr1G053250.8 , HORVU3Hr1G053250.9 , HORVU3Hr1G053250.4 , HORVU3Hr1G053250.5 , HORVU3Hr1G053250.6 , HORVU3Hr1G053250.7 , HORVU3Hr1G053250.2 , HORVU3Hr1G053250.3 , HORVU3Hr1G053250.18 , HORVU3Hr1G053250.16 , HORVU3Hr1G053250.12 , HORVU3Hr1G053250.13 , HORVU3Hr1G053250.10 , HORVU3Hr1G053250.17 , HORVU3Hr1G053250.14 , HORVU3Hr1G053250.15 , HORVU3Hr1G053250.11
Wheat TraesCS3D02G234700 , TraesCS3A02G217600 , TraesCS3A02G217600 , TraesCS3B02G247900 , TraesCS3B02G247900 , TraesCS3B02G247900 , TraesCS3B02G247900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
2 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
3 Sobic.003G052800 RST1, putative, expressed -
4 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
5 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
6 Sobic.001G480550 - -
7 Sobic.005G191700 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
8 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
9 Sobic.006G245900 FAR1 family protein, expressed -
10 Sobic.001G501800 ZOS1-20 - C2H2 zinc finger protein, expressed -
11 Sobic.007G017200 OsFBX142 - F-box domain containing protein, expressed -
12 Sobic.003G217200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
13 Sobic.010G264900 OsFBX79 - F-box domain containing protein, expressed -
14 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
15 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
16 Sobic.007G187600 pentatricopeptide, putative, expressed -
17 Sobic.005G047300 OsFBT13 - F-box and tubby domain containing protein, expressed -
18 Sobic.002G371600 Spc97 / Spc98 family protein, putative, expressed K16572: TUBGCP5, gamma-tubulin complex component 5
19 Sobic.004G020100 division protein, putative, expressed -
20 Sobic.003G433300 DNA mismatch repair protein Mlh1, putative, expressed K08734: DNA mismatch repair protein MLH1


Gene co-expression network
sample Sobic003G214700 Sobic003G214700 Sobic001G013300 Sobic001G013300 Sobic003G214700--Sobic001G013300 Sobic009G113100 Sobic009G113100 Sobic003G214700--Sobic009G113100 Sobic003G052800 Sobic003G052800 Sobic003G214700--Sobic003G052800 Sobic001G004100 Sobic001G004100 Sobic003G214700--Sobic001G004100 Sobic001G346900 Sobic001G346900 Sobic003G214700--Sobic001G346900 Sobic001G480550 Sobic001G480550 Sobic003G214700--Sobic001G480550 Sobic005G191700 Sobic005G191700 Sobic003G214700--Sobic005G191700 Sobic003G409200 Sobic003G409200 Sobic003G214700--Sobic003G409200 Sobic006G245900 Sobic006G245900 Sobic003G214700--Sobic006G245900 Sobic004G285000 Sobic004G285000 Sobic001G013300--Sobic004G285000 Sobic001G373000 Sobic001G373000 Sobic001G013300--Sobic001G373000 Sobic008G147200 Sobic008G147200 Sobic001G013300--Sobic008G147200 Sobic001G013300--Sobic001G346900 Sobic001G013300--Sobic001G004100 Sobic010G215900 Sobic010G215900 Sobic001G013300--Sobic010G215900 Sobic001G013300--Sobic003G409200 Sobic007G187600 Sobic007G187600 Sobic001G013300--Sobic007G187600 Sobic001G023800 Sobic001G023800 Sobic001G013300--Sobic001G023800 Sobic009G069200 Sobic009G069200 Sobic009G113100--Sobic009G069200 Sobic001G090300 Sobic001G090300 Sobic009G113100--Sobic001G090300 Sobic005G198200 Sobic005G198200 Sobic009G113100--Sobic005G198200 Sobic009G113100--Sobic001G004100 Sobic002G208400 Sobic002G208400 Sobic009G113100--Sobic002G208400 Sobic009G113100--Sobic007G187600 Sobic009G113100--Sobic003G214700 Sobic009G113100--Sobic001G013300 Sobic006G061100 Sobic006G061100 Sobic009G113100--Sobic006G061100 Sobic006G269800 Sobic006G269800 Sobic003G052800--Sobic006G269800 Sobic002G145800 Sobic002G145800 Sobic003G052800--Sobic002G145800 Sobic002G430300 Sobic002G430300 Sobic003G052800--Sobic002G430300 Sobic002G371600 Sobic002G371600 Sobic003G052800--Sobic002G371600 Sobic002G372500 Sobic002G372500 Sobic003G052800--Sobic002G372500 Sobic001G051700 Sobic001G051700 Sobic003G052800--Sobic001G051700 Sobic002G043100 Sobic002G043100 Sobic003G052800--Sobic002G043100 Sobic010G174700 Sobic010G174700 Sobic003G052800--Sobic010G174700 Sobic003G217200 Sobic003G217200 Sobic003G052800--Sobic003G217200 Sobic004G031300 Sobic004G031300 Sobic001G004100--Sobic004G031300 Sobic001G004100--Sobic007G187600 Sobic001G004100--Sobic001G013300 Sobic001G004100--Sobic009G113100 Sobic009G255600 Sobic009G255600 Sobic001G004100--Sobic009G255600 Sobic001G408600 Sobic001G408600 Sobic001G004100--Sobic001G408600 Sobic001G004100--Sobic001G373000 Sobic002G142700 Sobic002G142700 Sobic001G004100--Sobic002G142700 Sobic001G034500 Sobic001G034500 Sobic001G004100--Sobic001G034500 Sobic004G086200 Sobic004G086200 Sobic001G346900--Sobic004G086200 Sobic001G346900--Sobic003G409200 Sobic001G134300 Sobic001G134300 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic001G346900--Sobic008G147200 Sobic001G346900--Sobic004G285000 Sobic003G416700 Sobic003G416700 Sobic001G346900--Sobic003G416700 Sobic010G096000 Sobic010G096000 Sobic001G346900--Sobic010G096000 Sobic002G422100 Sobic002G422100 Sobic001G346900--Sobic002G422100 Sobic002G393332 Sobic002G393332 Sobic001G480550--Sobic002G393332 Sobic001G480550--Sobic003G214700 Sobic001G480550--Sobic009G113100 Sobic010G015900 Sobic010G015900 Sobic001G480550--Sobic010G015900 Sobic004G155800 Sobic004G155800 Sobic001G480550--Sobic004G155800 Sobic004G065800 Sobic004G065800 Sobic001G480550--Sobic004G065800 Sobic007G042300 Sobic007G042300 Sobic001G480550--Sobic007G042300 Sobic010G021200 Sobic010G021200 Sobic001G480550--Sobic010G021200 Sobic001G367700 Sobic001G367700 Sobic001G480550--Sobic001G367700 Sobic005G191700--Sobic006G269800 Sobic005G046900 Sobic005G046900 Sobic005G191700--Sobic005G046900 Sobic005G191700--Sobic002G145800 Sobic005G191700--Sobic001G013300 Sobic005G191700--Sobic003G409200 Sobic008G057000 Sobic008G057000 Sobic005G191700--Sobic008G057000 Sobic003G062300 Sobic003G062300 Sobic005G191700--Sobic003G062300 Sobic001G373400 Sobic001G373400 Sobic005G191700--Sobic001G373400 Sobic002G029100 Sobic002G029100 Sobic005G191700--Sobic002G029100 Sobic003G409200--Sobic001G346900 Sobic003G409200--Sobic010G215900 Sobic004G111000 Sobic004G111000 Sobic003G409200--Sobic004G111000 Sobic003G409200--Sobic008G057000 Sobic003G427100 Sobic003G427100 Sobic003G409200--Sobic003G427100 Sobic001G501800 Sobic001G501800 Sobic003G409200--Sobic001G501800 Sobic003G409200--Sobic004G285000 Sobic010G279900 Sobic010G279900 Sobic003G409200--Sobic010G279900 Sobic003G409200--Sobic002G145800 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic002G292800 Sobic002G292800 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic006G245900--Sobic001G346900
Octagon: transcription factors


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