Gene annotation
Transcriptome id Sobic.004G020100.1
Synonym Sb04g001860, ARC6
Functional annotation division protein, putative, expressed
UniProt A0A097PML9 , C5XT22
Pfam PF13355
Panther DB PTHR33925 PTHR33925:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42480 : Chaperone DnaJ-domain superfamily protein
RAP-DB (Rice) LOC_Os02g03000.2 : division protein, putative, expressed
MaizeGDB (Corn) Zm00025a034935
Brachypodium KQJ93009 , PNT65761
Barley HORVU6Hr1G012020.11 , HORVU6Hr1G012020.10 , HORVU6Hr1G012020.12 , HORVU6Hr1G012020.9 , HORVU6Hr1G012020.8 , HORVU6Hr1G012020.1 , HORVU6Hr1G012020.3 , HORVU6Hr1G012020.2 , HORVU6Hr1G012020.5 , HORVU6Hr1G012020.7 , HORVU6Hr1G012020.6
Wheat TraesCSU02G117700 , TraesCS6A02G066200 , TraesCSU02G117700 , TraesCS6A02G066200 , TraesCS6A02G066200 , TraesCS6A02G066200 , TraesCS6B02G089500 , TraesCS6B02G089500
Populus -


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cDNA sequences
Sobic.004G020100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G010900 expressed protein -
2 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
3 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
4 Sobic.001G229300 expressed protein -
5 Sobic.009G032200 DNA methyltransferase protein, putative, expressed -
6 Sobic.003G432800 CRS1/YhbY domain containing protein, putative, expressed -
7 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
8 Sobic.002G296400 E3 ubiquitin-protein ligase HERC2, putative, expressed -
9 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
10 Sobic.007G017200 OsFBX142 - F-box domain containing protein, expressed -
11 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.002G371600 Spc97 / Spc98 family protein, putative, expressed K16572: TUBGCP5, gamma-tubulin complex component 5
13 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
14 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
15 Sobic.005G191700 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
16 Sobic.001G340300 tentative name(PubMedID : 31536532)@expressed protein -
17 Sobic.007G016900 OsFBL26 - F-box domain and LRR containing protein, expressed -
18 Sobic.002G263700 bromodomain protein 103, putative, expressed -
19 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
20 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -


Gene co-expression network
sample Sobic004G020100 Sobic004G020100 Sobic003G010900 Sobic003G010900 Sobic004G020100--Sobic003G010900 Sobic001G123600 Sobic001G123600 Sobic004G020100--Sobic001G123600 Sobic002G076500 Sobic002G076500 Sobic004G020100--Sobic002G076500 Sobic001G229300 Sobic001G229300 Sobic004G020100--Sobic001G229300 Sobic009G032200 Sobic009G032200 Sobic004G020100--Sobic009G032200 Sobic003G432800 Sobic003G432800 Sobic004G020100--Sobic003G432800 Sobic001G051400 Sobic001G051400 Sobic004G020100--Sobic001G051400 Sobic002G296400 Sobic002G296400 Sobic004G020100--Sobic002G296400 Sobic006G191200 Sobic006G191200 Sobic004G020100--Sobic006G191200 Sobic003G010900--Sobic001G051400 Sobic004G145600 Sobic004G145600 Sobic003G010900--Sobic004G145600 Sobic002G066800 Sobic002G066800 Sobic003G010900--Sobic002G066800 Sobic007G016900 Sobic007G016900 Sobic003G010900--Sobic007G016900 Sobic003G010900--Sobic001G123600 Sobic004G084400 Sobic004G084400 Sobic003G010900--Sobic004G084400 Sobic003G010900--Sobic001G229300 Sobic003G010900--Sobic003G432800 Sobic002G381900 Sobic002G381900 Sobic003G010900--Sobic002G381900 Sobic001G123600--Sobic006G191200 Sobic001G123600--Sobic001G229300 Sobic003G360300 Sobic003G360300 Sobic001G123600--Sobic003G360300 Sobic007G034200 Sobic007G034200 Sobic001G123600--Sobic007G034200 Sobic002G386900 Sobic002G386900 Sobic001G123600--Sobic002G386900 Sobic010G269300 Sobic010G269300 Sobic001G123600--Sobic010G269300 Sobic009G120400 Sobic009G120400 Sobic001G123600--Sobic009G120400 Sobic003G299500 Sobic003G299500 Sobic001G123600--Sobic003G299500 Sobic001G123600--Sobic003G010900 Sobic007G153500 Sobic007G153500 Sobic002G076500--Sobic007G153500 Sobic008G116700 Sobic008G116700 Sobic002G076500--Sobic008G116700 Sobic002G076500--Sobic003G432800 Sobic002G322400 Sobic002G322400 Sobic002G076500--Sobic002G322400 Sobic006G210700 Sobic006G210700 Sobic002G076500--Sobic006G210700 Sobic008G019532 Sobic008G019532 Sobic002G076500--Sobic008G019532 Sobic005G087300 Sobic005G087300 Sobic002G076500--Sobic005G087300 Sobic004G172500 Sobic004G172500 Sobic002G076500--Sobic004G172500 Sobic002G076500--Sobic001G051400 Sobic001G229300--Sobic001G123600 Sobic003G129300 Sobic003G129300 Sobic001G229300--Sobic003G129300 Sobic004G354100 Sobic004G354100 Sobic001G229300--Sobic004G354100 Sobic004G256300 Sobic004G256300 Sobic001G229300--Sobic004G256300 Sobic001G229300--Sobic003G010900 Sobic001G229300--Sobic002G066800 Sobic003G222700 Sobic003G222700 Sobic001G229300--Sobic003G222700 Sobic002G142700 Sobic002G142700 Sobic001G229300--Sobic002G142700 Sobic006G106600 Sobic006G106600 Sobic001G229300--Sobic006G106600 Sobic010G236200 Sobic010G236200 Sobic009G032200--Sobic010G236200 Sobic010G233000 Sobic010G233000 Sobic009G032200--Sobic010G233000 Sobic009G032200--Sobic010G269300 Sobic004G043750 Sobic004G043750 Sobic009G032200--Sobic004G043750 Sobic008G057000 Sobic008G057000 Sobic009G032200--Sobic008G057000 Sobic009G257500 Sobic009G257500 Sobic009G032200--Sobic009G257500 Sobic003G221500 Sobic003G221500 Sobic009G032200--Sobic003G221500 Sobic010G215900 Sobic010G215900 Sobic009G032200--Sobic010G215900 Sobic001G135500 Sobic001G135500 Sobic009G032200--Sobic001G135500 Sobic003G432800--Sobic002G076500 Sobic003G432800--Sobic003G010900 Sobic006G112500 Sobic006G112500 Sobic003G432800--Sobic006G112500 Sobic003G432800--Sobic001G051400 Sobic003G432800--Sobic006G191200 Sobic003G432800--Sobic002G381900 Sobic002G342300 Sobic002G342300 Sobic003G432800--Sobic002G342300 Sobic003G432800--Sobic001G123600 Sobic003G113300 Sobic003G113300 Sobic003G432800--Sobic003G113300 Sobic001G051400--Sobic002G066800 Sobic001G051400--Sobic007G034200 Sobic003G393200 Sobic003G393200 Sobic001G051400--Sobic003G393200 Sobic001G051400--Sobic003G010900 Sobic001G051400--Sobic009G120400 Sobic001G051400--Sobic006G191200 Sobic001G051400--Sobic005G087300 Sobic002G078100 Sobic002G078100 Sobic001G051400--Sobic002G078100 Sobic005G123400 Sobic005G123400 Sobic001G051400--Sobic005G123400 Sobic002G296400--Sobic006G191200 Sobic006G245900 Sobic006G245900 Sobic002G296400--Sobic006G245900 Sobic002G363800 Sobic002G363800 Sobic002G296400--Sobic002G363800 Sobic002G296400--Sobic003G113300 Sobic001G308400 Sobic001G308400 Sobic002G296400--Sobic001G308400 Sobic009G008200 Sobic009G008200 Sobic002G296400--Sobic009G008200 Sobic003G256800 Sobic003G256800 Sobic002G296400--Sobic003G256800 Sobic002G296400--Sobic002G066800 Sobic002G296400--Sobic001G123600 Sobic006G191200--Sobic001G123600 Sobic006G191200--Sobic002G296400 Sobic006G191200--Sobic001G051400 Sobic006G191200--Sobic002G078100 Sobic006G191200--Sobic002G066800 Sobic006G191200--Sobic003G299500 Sobic006G191200--Sobic002G386900 Sobic006G191200--Sobic009G120400 Sobic004G097900 Sobic004G097900 Sobic006G191200--Sobic004G097900
Octagon: transcription factors


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