Gene annotation
Transcriptome id Sobic.001G480550.1
Synonym -
Functional annotation -
UniProt A0A1Z5SB33
Pfam PF07897 PF01593
Panther DB PTHR10742 PTHR10742:SF278
NCBI CDD KOG0029; Amine oxidase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G14210 : phytoene desaturase 3
RAP-DB (Rice) LOC_Os03g08570.1 : amine oxidase, flavin-containing, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007279 , Zm00025a000962 , Zm00025a042670 , Zm00025a048411 , Zm00025a036772
Brachypodium KQK23275 , KQK23277 , KQK23276
Barley HORVU4Hr1G077450.15 , HORVU4Hr1G077450.14 , HORVU4Hr1G077450.13 , HORVU4Hr1G077450.12 , HORVU4Hr1G077450.11 , HORVU4Hr1G077450.10 , HORVU4Hr1G077450.9 , HORVU4Hr1G077450.8 , HORVU4Hr1G077450.7 , HORVU4Hr1G077450.6 , HORVU4Hr1G077450.5 , HORVU4Hr1G077450.4 , HORVU4Hr1G077450.3 , HORVU4Hr1G077450.2 , HORVU4Hr1G077450.1
Wheat TraesCS4D02G299000 , TraesCS4D02G299000 , TraesCS4B02G300100 , TraesCS4B02G300100 , TraesCS4A02G004900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G393332 - -
2 Sobic.003G214700 transcriptional corepressor LEUNIG, putative, expressed -
3 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
4 Sobic.010G015900 transcriptional corepressor SEUSS, putative, expressed -
5 Sobic.004G155800 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01652: E2.2.1.6L, ilvB, ilvG, acetolactate synthase I/II/III large subunit
6 Sobic.004G065800 - -
7 Sobic.007G042300 expressed protein -
8 Sobic.010G021200 GAGA-binding protein, putative, expressed -
9 Sobic.001G367700 rhythmically expressed gene 2 protein, putative, expressed -
10 Sobic.005G191700 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
11 Sobic.010G189100 expressed protein -
12 Sobic.009G132600 methyl-binding domain protein MBD, putative, expressed -
13 Sobic.009G122800 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
14 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
15 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
16 Sobic.005G072400 expressed protein -
17 Sobic.003G159500 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.003G404000 Plant stearoyl-acyl-carrier-protein desaturase family protein(PubMedID : 26465154)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
19 Sobic.009G257500 expressed protein -
20 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G480550 Sobic001G480550 Sobic002G393332 Sobic002G393332 Sobic001G480550--Sobic002G393332 Sobic003G214700 Sobic003G214700 Sobic001G480550--Sobic003G214700 Sobic009G113100 Sobic009G113100 Sobic001G480550--Sobic009G113100 Sobic010G015900 Sobic010G015900 Sobic001G480550--Sobic010G015900 Sobic004G155800 Sobic004G155800 Sobic001G480550--Sobic004G155800 Sobic004G065800 Sobic004G065800 Sobic001G480550--Sobic004G065800 Sobic007G042300 Sobic007G042300 Sobic001G480550--Sobic007G042300 Sobic010G021200 Sobic010G021200 Sobic001G480550--Sobic010G021200 Sobic001G367700 Sobic001G367700 Sobic001G480550--Sobic001G367700 Sobic002G393332--Sobic001G480550 Sobic002G393332--Sobic009G113100 Sobic009G132600 Sobic009G132600 Sobic002G393332--Sobic009G132600 Sobic006G156801 Sobic006G156801 Sobic002G393332--Sobic006G156801 Sobic002G142700 Sobic002G142700 Sobic002G393332--Sobic002G142700 Sobic001G004100 Sobic001G004100 Sobic002G393332--Sobic001G004100 Sobic004G006600 Sobic004G006600 Sobic002G393332--Sobic004G006600 Sobic002G208400 Sobic002G208400 Sobic002G393332--Sobic002G208400 Sobic002G393332--Sobic007G042300 Sobic001G013300 Sobic001G013300 Sobic003G214700--Sobic001G013300 Sobic003G214700--Sobic009G113100 Sobic003G052800 Sobic003G052800 Sobic003G214700--Sobic003G052800 Sobic003G214700--Sobic001G004100 Sobic001G346900 Sobic001G346900 Sobic003G214700--Sobic001G346900 Sobic003G214700--Sobic001G480550 Sobic005G191700 Sobic005G191700 Sobic003G214700--Sobic005G191700 Sobic003G409200 Sobic003G409200 Sobic003G214700--Sobic003G409200 Sobic006G245900 Sobic006G245900 Sobic003G214700--Sobic006G245900 Sobic009G069200 Sobic009G069200 Sobic009G113100--Sobic009G069200 Sobic001G090300 Sobic001G090300 Sobic009G113100--Sobic001G090300 Sobic005G198200 Sobic005G198200 Sobic009G113100--Sobic005G198200 Sobic009G113100--Sobic001G004100 Sobic009G113100--Sobic002G208400 Sobic007G187600 Sobic007G187600 Sobic009G113100--Sobic007G187600 Sobic009G113100--Sobic003G214700 Sobic009G113100--Sobic001G013300 Sobic006G061100 Sobic006G061100 Sobic009G113100--Sobic006G061100 Sobic010G015900--Sobic007G042300 Sobic010G015900--Sobic001G480550 Sobic001G039500 Sobic001G039500 Sobic010G015900--Sobic001G039500 Sobic010G015900--Sobic010G021200 Sobic002G029100 Sobic002G029100 Sobic010G015900--Sobic002G029100 Sobic001G501800 Sobic001G501800 Sobic010G015900--Sobic001G501800 Sobic010G154000 Sobic010G154000 Sobic010G015900--Sobic010G154000 Sobic003G159500 Sobic003G159500 Sobic010G015900--Sobic003G159500 Sobic002G272250 Sobic002G272250 Sobic010G015900--Sobic002G272250 Sobic001G423300 Sobic001G423300 Sobic004G155800--Sobic001G423300 Sobic004G155800--Sobic001G480550 Sobic005G072400 Sobic005G072400 Sobic004G155800--Sobic005G072400 Sobic001G130700 Sobic001G130700 Sobic004G155800--Sobic001G130700 Sobic005G187400 Sobic005G187400 Sobic004G155800--Sobic005G187400 Sobic005G046900 Sobic005G046900 Sobic004G155800--Sobic005G046900 Sobic003G022200 Sobic003G022200 Sobic004G155800--Sobic003G022200 Sobic010G270800 Sobic010G270800 Sobic004G155800--Sobic010G270800 Sobic009G257500 Sobic009G257500 Sobic004G155800--Sobic009G257500 Sobic001G194100 Sobic001G194100 Sobic004G065800--Sobic001G194100 Sobic004G071050 Sobic004G071050 Sobic004G065800--Sobic004G071050 Sobic004G339900 Sobic004G339900 Sobic004G065800--Sobic004G339900 Sobic003G062101 Sobic003G062101 Sobic004G065800--Sobic003G062101 Sobic009G033500 Sobic009G033500 Sobic004G065800--Sobic009G033500 Sobic002G420400 Sobic002G420400 Sobic004G065800--Sobic002G420400 Sobic007G041200 Sobic007G041200 Sobic004G065800--Sobic007G041200 Sobic001G485200 Sobic001G485200 Sobic004G065800--Sobic001G485200 Sobic010G106601 Sobic010G106601 Sobic004G065800--Sobic010G106601 Sobic007G042300--Sobic010G015900 Sobic007G042300--Sobic006G061100 Sobic007G042300--Sobic003G159500 Sobic009G239900 Sobic009G239900 Sobic007G042300--Sobic009G239900 Sobic004G075700 Sobic004G075700 Sobic007G042300--Sobic004G075700 Sobic007G042300--Sobic001G480550 Sobic006G179600 Sobic006G179600 Sobic007G042300--Sobic006G179600 Sobic007G042300--Sobic001G423300 Sobic007G042300--Sobic009G113100 Sobic007G041300 Sobic007G041300 Sobic010G021200--Sobic007G041300 Sobic006G276000 Sobic006G276000 Sobic010G021200--Sobic006G276000 Sobic006G051900 Sobic006G051900 Sobic010G021200--Sobic006G051900 Sobic010G029900 Sobic010G029900 Sobic010G021200--Sobic010G029900 Sobic010G021200--Sobic010G015900 Sobic006G278200 Sobic006G278200 Sobic010G021200--Sobic006G278200 Sobic010G021200--Sobic001G480550 Sobic007G002900 Sobic007G002900 Sobic010G021200--Sobic007G002900 Sobic010G194700 Sobic010G194700 Sobic010G021200--Sobic010G194700 Sobic001G196700 Sobic001G196700 Sobic001G367700--Sobic001G196700 Sobic003G242200 Sobic003G242200 Sobic001G367700--Sobic003G242200 Sobic005G110445 Sobic005G110445 Sobic001G367700--Sobic005G110445 Sobic001G394100 Sobic001G394100 Sobic001G367700--Sobic001G394100 Sobic005G199300 Sobic005G199300 Sobic001G367700--Sobic005G199300 Sobic003G392500 Sobic003G392500 Sobic001G367700--Sobic003G392500 Sobic009G010000 Sobic009G010000 Sobic001G367700--Sobic009G010000 Sobic009G013400 Sobic009G013400 Sobic001G367700--Sobic009G013400 Sobic010G142300 Sobic010G142300 Sobic001G367700--Sobic010G142300
Octagon: transcription factors


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