Gene annotation
Transcriptome id Sobic.003G404000.1
Synonym FAB2, Sb03g043970, SSI2
Functional annotation Plant stearoyl-acyl-carrier-protein desaturase family protein (PubMedID : 26465154)
acyl-desaturase, chloroplast precursor, putative, expressed
UniProt C5XG99
Pfam PF03405
Panther DB PTHR31155 PTHR31155:SF9
NCBI CDD -
KEGG Orthology K03921; FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
Gene Ontology GO:0006631; fatty acid metabolic process


Orthologs (automatic annotation)
TAIR AT2G43710 : Plant stearoyl-acyl-carrier-protein desaturase family protein
RAP-DB (Rice) LOC_Os01g69080.1 : acyl-desaturase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a026276 , Zm00025a039308
Brachypodium KQK11236
Barley HORVU3Hr1G094050.3 , HORVU3Hr1G094050.1 , HORVU3Hr1G094050.7 , HORVU3Hr1G094050.6 , HORVU3Hr1G094050.5 , HORVU3Hr1G094050.4
Wheat TraesCS3A02G426800 , TraesCS3A02G426800 , TraesCS3A02G426800 , TraesCS3D02G421700 , TraesCS3B02G463000 , TraesCS3B02G463000
Populus -


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cDNA sequences
Sobic.003G404000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G125300 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
2 Sobic.010G012001 - -
3 Sobic.003G418200 spermatogenesis-associated protein 20 precursor, putative, expressed -
4 Sobic.001G480550 - -
5 Sobic.003G224600 CPuORF17 - conserved peptide uORF-containing transcript, expressed -
6 Sobic.002G366300 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.002G391100 Thioredoxin peroxidase (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed K11188: peroxiredoxin 6
8 Sobic.002G393332 - -
9 Sobic.002G118300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@AWPM-19-like membrane family protein, putative, expressed -
10 Sobic.001G017500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
11 Sobic.003G236200 oleosin, putative, expressed -
12 Sobic.003G098800 osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
13 Sobic.003G283700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1264 domain containing protein, putative, expressed -
14 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.003G295600 DUF1264 domain containing protein, putative, expressed -
16 Sobic.005G045700 PHD-finger family protein, expressed -
17 Sobic.003G210000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.007G075250 - -
19 Sobic.001G544400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@oleosin, putative, expressed -
20 Sobic.004G301800 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain


Gene co-expression network
sample Sobic003G404000 Sobic003G404000 Sobic001G125300 Sobic001G125300 Sobic003G404000--Sobic001G125300 Sobic010G012001 Sobic010G012001 Sobic003G404000--Sobic010G012001 Sobic003G418200 Sobic003G418200 Sobic003G404000--Sobic003G418200 Sobic001G480550 Sobic001G480550 Sobic003G404000--Sobic001G480550 Sobic003G224600 Sobic003G224600 Sobic003G404000--Sobic003G224600 Sobic002G366300 Sobic002G366300 Sobic003G404000--Sobic002G366300 Sobic002G391100 Sobic002G391100 Sobic003G404000--Sobic002G391100 Sobic002G393332 Sobic002G393332 Sobic003G404000--Sobic002G393332 Sobic002G118300 Sobic002G118300 Sobic003G404000--Sobic002G118300 Sobic003G098800 Sobic003G098800 Sobic001G125300--Sobic003G098800 Sobic003G437400 Sobic003G437400 Sobic001G125300--Sobic003G437400 Sobic001G380800 Sobic001G380800 Sobic001G125300--Sobic001G380800 Sobic004G301800 Sobic004G301800 Sobic001G125300--Sobic004G301800 Sobic003G295600 Sobic003G295600 Sobic001G125300--Sobic003G295600 Sobic002G393100 Sobic002G393100 Sobic001G125300--Sobic002G393100 Sobic010G131500 Sobic010G131500 Sobic001G125300--Sobic010G131500 Sobic010G142900 Sobic010G142900 Sobic001G125300--Sobic010G142900 Sobic006G053200 Sobic006G053200 Sobic001G125300--Sobic006G053200 Sobic010G012001--Sobic003G404000 Sobic008G030900 Sobic008G030900 Sobic010G012001--Sobic008G030900 Sobic006G030001 Sobic006G030001 Sobic010G012001--Sobic006G030001 Sobic002G240500 Sobic002G240500 Sobic010G012001--Sobic002G240500 Sobic010G012001--Sobic002G118300 Sobic001G017500 Sobic001G017500 Sobic010G012001--Sobic001G017500 Sobic001G544400 Sobic001G544400 Sobic010G012001--Sobic001G544400 Sobic010G012001--Sobic002G391100 Sobic003G236200 Sobic003G236200 Sobic010G012001--Sobic003G236200 Sobic001G254600 Sobic001G254600 Sobic003G418200--Sobic001G254600 Sobic006G030100 Sobic006G030100 Sobic003G418200--Sobic006G030100 Sobic007G100500 Sobic007G100500 Sobic003G418200--Sobic007G100500 Sobic003G418200--Sobic003G404000 Sobic001G290600 Sobic001G290600 Sobic003G418200--Sobic001G290600 Sobic010G155600 Sobic010G155600 Sobic003G418200--Sobic010G155600 Sobic003G433300 Sobic003G433300 Sobic003G418200--Sobic003G433300 Sobic001G283300 Sobic001G283300 Sobic003G418200--Sobic001G283300 Sobic003G418200--Sobic002G366300 Sobic001G480550--Sobic002G393332 Sobic003G214700 Sobic003G214700 Sobic001G480550--Sobic003G214700 Sobic009G113100 Sobic009G113100 Sobic001G480550--Sobic009G113100 Sobic010G015900 Sobic010G015900 Sobic001G480550--Sobic010G015900 Sobic004G155800 Sobic004G155800 Sobic001G480550--Sobic004G155800 Sobic004G065800 Sobic004G065800 Sobic001G480550--Sobic004G065800 Sobic007G042300 Sobic007G042300 Sobic001G480550--Sobic007G042300 Sobic010G021200 Sobic010G021200 Sobic001G480550--Sobic010G021200 Sobic001G367700 Sobic001G367700 Sobic001G480550--Sobic001G367700 Sobic010G170000 Sobic010G170000 Sobic003G224600--Sobic010G170000 Sobic007G053100 Sobic007G053100 Sobic003G224600--Sobic007G053100 Sobic003G224600--Sobic003G404000 Sobic008G191850 Sobic008G191850 Sobic003G224600--Sobic008G191850 Sobic004G033200 Sobic004G033200 Sobic003G224600--Sobic004G033200 Sobic004G066500 Sobic004G066500 Sobic003G224600--Sobic004G066500 Sobic005G045700 Sobic005G045700 Sobic003G224600--Sobic005G045700 Sobic003G224600--Sobic003G418200 Sobic001G493500 Sobic001G493500 Sobic003G224600--Sobic001G493500 Sobic010G179300 Sobic010G179300 Sobic002G366300--Sobic010G179300 Sobic001G125400 Sobic001G125400 Sobic002G366300--Sobic001G125400 Sobic005G147600 Sobic005G147600 Sobic002G366300--Sobic005G147600 Sobic007G025600 Sobic007G025600 Sobic002G366300--Sobic007G025600 Sobic006G083900 Sobic006G083900 Sobic002G366300--Sobic006G083900 Sobic006G167700 Sobic006G167700 Sobic002G366300--Sobic006G167700 Sobic009G103800 Sobic009G103800 Sobic002G366300--Sobic009G103800 Sobic002G184700 Sobic002G184700 Sobic002G366300--Sobic002G184700 Sobic001G534200 Sobic001G534200 Sobic002G366300--Sobic001G534200 Sobic003G283700 Sobic003G283700 Sobic002G391100--Sobic003G283700 Sobic002G391100--Sobic001G017500 Sobic002G391100--Sobic003G236200 Sobic002G391100--Sobic003G098800 Sobic002G391100--Sobic003G295600 Sobic002G391100--Sobic002G118300 Sobic002G391100--Sobic004G301800 Sobic004G281700 Sobic004G281700 Sobic002G391100--Sobic004G281700 Sobic007G162700 Sobic007G162700 Sobic002G391100--Sobic007G162700 Sobic002G393332--Sobic001G480550 Sobic002G393332--Sobic009G113100 Sobic009G132600 Sobic009G132600 Sobic002G393332--Sobic009G132600 Sobic006G156801 Sobic006G156801 Sobic002G393332--Sobic006G156801 Sobic002G142700 Sobic002G142700 Sobic002G393332--Sobic002G142700 Sobic001G004100 Sobic001G004100 Sobic002G393332--Sobic001G004100 Sobic004G006600 Sobic004G006600 Sobic002G393332--Sobic004G006600 Sobic002G208400 Sobic002G208400 Sobic002G393332--Sobic002G208400 Sobic002G393332--Sobic007G042300 Sobic002G118300--Sobic001G017500 Sobic002G118300--Sobic003G236200 Sobic002G118300--Sobic002G391100 Sobic002G118300--Sobic003G283700 Sobic002G118300--Sobic003G295600 Sobic002G118300--Sobic004G281700 Sobic002G118300--Sobic004G301800 Sobic007G075250 Sobic007G075250 Sobic002G118300--Sobic007G075250 Sobic002G118300--Sobic010G142900
Octagon: transcription factors


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