Gene annotation
Transcriptome id Sobic.003G418200.1
Synonym Sb03g045190
Functional annotation spermatogenesis-associated protein 20 precursor, putative, expressed
UniProt C5XH55
Pfam PF13899
Panther DB PTHR12145 PTHR12145:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03200 : catalytics
RAP-DB (Rice) LOC_Os01g70950.1 : spermatogenesis-associated protein 20 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a026104
Brachypodium KQK11414 , PNT73542
Barley HORVU3Hr1G098660.8 , HORVU3Hr1G098660.1 , HORVU3Hr1G098660.2 , HORVU3Hr1G098660.3 , HORVU3Hr1G098660.4 , HORVU3Hr1G098660.5 , HORVU3Hr1G098660.6 , HORVU3Hr1G098660.7
Wheat TraesCS3B02G498300 , TraesCS3B02G498300 , TraesCS3D02G450900 , TraesCS3A02G458100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G254600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized oxidoreductase, putative, expressed -
2 Sobic.006G030100 acetyl-CoA carboxylase, putative, expressed K11262: acetyl-CoA carboxylase / biotin carboxylase 1
3 Sobic.007G100500 PPR repeat domain containing protein, putative, expressed -
4 Sobic.003G404000 Plant stearoyl-acyl-carrier-protein desaturase family protein(PubMedID : 26465154)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
5 Sobic.001G290600 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
6 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
7 Sobic.003G433300 DNA mismatch repair protein Mlh1, putative, expressed K08734: DNA mismatch repair protein MLH1
8 Sobic.001G283300 PPR repeat domain containing protein, putative, expressed -
9 Sobic.002G366300 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G447200 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
11 Sobic.003G155300 dihydrolipoyl dehydrogenase, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase
12 Sobic.003G224600 CPuORF17 - conserved peptide uORF-containing transcript, expressed -
13 Sobic.006G049900 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
14 Sobic.003G120800 expressed protein -
15 Sobic.009G015400 ATCHX20, putative, expressed -
16 Sobic.001G286500 expressed protein -
17 Sobic.005G045700 PHD-finger family protein, expressed -
18 Sobic.002G127900 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
19 Sobic.008G097600 cyclin-T1-4, putative, expressed K15188: cyclin T
20 Sobic.006G125500 expressed protein -


Gene co-expression network
sample Sobic003G418200 Sobic003G418200 Sobic001G254600 Sobic001G254600 Sobic003G418200--Sobic001G254600 Sobic006G030100 Sobic006G030100 Sobic003G418200--Sobic006G030100 Sobic007G100500 Sobic007G100500 Sobic003G418200--Sobic007G100500 Sobic003G404000 Sobic003G404000 Sobic003G418200--Sobic003G404000 Sobic001G290600 Sobic001G290600 Sobic003G418200--Sobic001G290600 Sobic010G155600 Sobic010G155600 Sobic003G418200--Sobic010G155600 Sobic003G433300 Sobic003G433300 Sobic003G418200--Sobic003G433300 Sobic001G283300 Sobic001G283300 Sobic003G418200--Sobic001G283300 Sobic002G366300 Sobic002G366300 Sobic003G418200--Sobic002G366300 Sobic001G254600--Sobic006G030100 Sobic006G261700 Sobic006G261700 Sobic001G254600--Sobic006G261700 Sobic003G222500 Sobic003G222500 Sobic001G254600--Sobic003G222500 Sobic001G254600--Sobic003G418200 Sobic006G132000 Sobic006G132000 Sobic001G254600--Sobic006G132000 Sobic001G333500 Sobic001G333500 Sobic001G254600--Sobic001G333500 Sobic004G343900 Sobic004G343900 Sobic001G254600--Sobic004G343900 Sobic004G331700 Sobic004G331700 Sobic001G254600--Sobic004G331700 Sobic008G171300 Sobic008G171300 Sobic001G254600--Sobic008G171300 Sobic006G030100--Sobic001G254600 Sobic003G155300 Sobic003G155300 Sobic006G030100--Sobic003G155300 Sobic006G050000 Sobic006G050000 Sobic006G030100--Sobic006G050000 Sobic009G063100 Sobic009G063100 Sobic006G030100--Sobic009G063100 Sobic009G129100 Sobic009G129100 Sobic006G030100--Sobic009G129100 Sobic006G030100--Sobic003G418200 Sobic006G030100--Sobic003G222500 Sobic004G016400 Sobic004G016400 Sobic006G030100--Sobic004G016400 Sobic007G070000 Sobic007G070000 Sobic006G030100--Sobic007G070000 Sobic003G120300 Sobic003G120300 Sobic007G100500--Sobic003G120300 Sobic006G026250 Sobic006G026250 Sobic007G100500--Sobic006G026250 Sobic006G128300 Sobic006G128300 Sobic007G100500--Sobic006G128300 Sobic007G075800 Sobic007G075800 Sobic007G100500--Sobic007G075800 Sobic007G100500--Sobic003G418200 Sobic007G100500--Sobic001G333500 Sobic003G308500 Sobic003G308500 Sobic007G100500--Sobic003G308500 Sobic006G038500 Sobic006G038500 Sobic007G100500--Sobic006G038500 Sobic007G132200 Sobic007G132200 Sobic007G100500--Sobic007G132200 Sobic001G125300 Sobic001G125300 Sobic003G404000--Sobic001G125300 Sobic010G012001 Sobic010G012001 Sobic003G404000--Sobic010G012001 Sobic003G404000--Sobic003G418200 Sobic001G480550 Sobic001G480550 Sobic003G404000--Sobic001G480550 Sobic003G224600 Sobic003G224600 Sobic003G404000--Sobic003G224600 Sobic003G404000--Sobic002G366300 Sobic002G391100 Sobic002G391100 Sobic003G404000--Sobic002G391100 Sobic002G393332 Sobic002G393332 Sobic003G404000--Sobic002G393332 Sobic002G118300 Sobic002G118300 Sobic003G404000--Sobic002G118300 Sobic001G290600--Sobic007G132200 Sobic001G290600--Sobic003G418200 Sobic008G097600 Sobic008G097600 Sobic001G290600--Sobic008G097600 Sobic003G309300 Sobic003G309300 Sobic001G290600--Sobic003G309300 Sobic001G290600--Sobic001G283300 Sobic001G434700 Sobic001G434700 Sobic001G290600--Sobic001G434700 Sobic001G290600--Sobic007G100500 Sobic003G252700 Sobic003G252700 Sobic001G290600--Sobic003G252700 Sobic010G130300 Sobic010G130300 Sobic001G290600--Sobic010G130300 Sobic006G237000 Sobic006G237000 Sobic010G155600--Sobic006G237000 Sobic005G031000 Sobic005G031000 Sobic010G155600--Sobic005G031000 Sobic010G155600--Sobic008G097600 Sobic002G125800 Sobic002G125800 Sobic010G155600--Sobic002G125800 Sobic010G155600--Sobic001G434700 Sobic004G275600 Sobic004G275600 Sobic010G155600--Sobic004G275600 Sobic001G537500 Sobic001G537500 Sobic010G155600--Sobic001G537500 Sobic004G356200 Sobic004G356200 Sobic010G155600--Sobic004G356200 Sobic004G037200 Sobic004G037200 Sobic010G155600--Sobic004G037200 Sobic003G433300--Sobic003G308500 Sobic003G433300--Sobic007G075800 Sobic001G098400 Sobic001G098400 Sobic003G433300--Sobic001G098400 Sobic002G371600 Sobic002G371600 Sobic003G433300--Sobic002G371600 Sobic004G031300 Sobic004G031300 Sobic003G433300--Sobic004G031300 Sobic006G125500 Sobic006G125500 Sobic003G433300--Sobic006G125500 Sobic005G045700 Sobic005G045700 Sobic003G433300--Sobic005G045700 Sobic002G252100 Sobic002G252100 Sobic003G433300--Sobic002G252100 Sobic010G264900 Sobic010G264900 Sobic003G433300--Sobic010G264900 Sobic001G283300--Sobic007G132200 Sobic001G283300--Sobic006G125500 Sobic001G283300--Sobic007G075800 Sobic002G155000 Sobic002G155000 Sobic001G283300--Sobic002G155000 Sobic006G128400 Sobic006G128400 Sobic001G283300--Sobic006G128400 Sobic002G043100 Sobic002G043100 Sobic001G283300--Sobic002G043100 Sobic002G317100 Sobic002G317100 Sobic001G283300--Sobic002G317100 Sobic010G260000 Sobic010G260000 Sobic001G283300--Sobic010G260000 Sobic003G399100 Sobic003G399100 Sobic001G283300--Sobic003G399100 Sobic010G179300 Sobic010G179300 Sobic002G366300--Sobic010G179300 Sobic001G125400 Sobic001G125400 Sobic002G366300--Sobic001G125400 Sobic005G147600 Sobic005G147600 Sobic002G366300--Sobic005G147600 Sobic007G025600 Sobic007G025600 Sobic002G366300--Sobic007G025600 Sobic006G083900 Sobic006G083900 Sobic002G366300--Sobic006G083900 Sobic006G167700 Sobic006G167700 Sobic002G366300--Sobic006G167700 Sobic009G103800 Sobic009G103800 Sobic002G366300--Sobic009G103800 Sobic002G184700 Sobic002G184700 Sobic002G366300--Sobic002G184700 Sobic001G534200 Sobic001G534200 Sobic002G366300--Sobic001G534200
Octagon: transcription factors


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