Gene annotation
Transcriptome id Sobic.001G290600.1
Synonym Sb01g028470, PKP2, PKP1, PKP-BETA1
Functional annotation pyruvate kinase, putative, expressed
UniProt C5WRD4
Pfam PF02887 PF00224
Panther DB PTHR11817 PTHR11817:SF24
NCBI CDD -
KEGG Orthology K00873; PK, pyruvate kinase
Gene Ontology GO:0006096; glycolytic process GO:0004743pyruvate kinase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G52920 : plastidic pyruvate kinase beta subunit 1
RAP-DB (Rice) LOC_Os10g42100.1 : pyruvate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a051850 , Zm00025a003456
Brachypodium KQJ97884
Barley HORVU1Hr1G054380.5 , HORVU1Hr1G054380.4 , HORVU1Hr1G054380.7 , HORVU1Hr1G054380.6 , HORVU1Hr1G054380.1 , HORVU1Hr1G054380.3 , HORVU1Hr1G054380.2 , HORVU1Hr1G054380.9 , HORVU1Hr1G054380.8 , HORVU1Hr1G054380.11 , HORVU1Hr1G054380.10
Wheat TraesCS1D02G215900 , TraesCS1A02G213000 , TraesCS1B02G226500
Populus -


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cDNA sequences
Sobic.001G290600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G132200 DNA-repair protein complementing XP-C cells, putative, expressed K10838: xeroderma pigmentosum group C-complementing protein
2 Sobic.003G418200 spermatogenesis-associated protein 20 precursor, putative, expressed -
3 Sobic.008G097600 cyclin-T1-4, putative, expressed K15188: cyclin T
4 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase
5 Sobic.001G283300 PPR repeat domain containing protein, putative, expressed -
6 Sobic.001G434700 phosphomevalonate kinase, putative, expressed K00938: E2.7.4.2, phosphomevalonate kinase
7 Sobic.007G100500 PPR repeat domain containing protein, putative, expressed -
8 Sobic.003G252700 protein of unknown function DUF1421 domain containing protein, expressed -
9 Sobic.010G130300 OsMan07 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
10 Sobic.001G165801 - -
11 Sobic.003G311600 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
12 Sobic.001G254600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized oxidoreductase, putative, expressed -
13 Sobic.006G049900 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
14 Sobic.007G075800 GTPase of unknown function domain containing protein, putative, expressed -
15 Sobic.006G119400 SWIM zinc finger family protein, putative, expressed -
16 Sobic.002G155000 EMB1381, putative, expressed -
17 Sobic.002G431400 - -
18 Sobic.003G433300 DNA mismatch repair protein Mlh1, putative, expressed K08734: DNA mismatch repair protein MLH1
19 Sobic.007G210000 ribosomal L18p/L5e family protein, expressed -
20 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase


Gene co-expression network
sample Sobic001G290600 Sobic001G290600 Sobic007G132200 Sobic007G132200 Sobic001G290600--Sobic007G132200 Sobic003G418200 Sobic003G418200 Sobic001G290600--Sobic003G418200 Sobic008G097600 Sobic008G097600 Sobic001G290600--Sobic008G097600 Sobic003G309300 Sobic003G309300 Sobic001G290600--Sobic003G309300 Sobic001G283300 Sobic001G283300 Sobic001G290600--Sobic001G283300 Sobic001G434700 Sobic001G434700 Sobic001G290600--Sobic001G434700 Sobic007G100500 Sobic007G100500 Sobic001G290600--Sobic007G100500 Sobic003G252700 Sobic003G252700 Sobic001G290600--Sobic003G252700 Sobic010G130300 Sobic010G130300 Sobic001G290600--Sobic010G130300 Sobic008G038600 Sobic008G038600 Sobic007G132200--Sobic008G038600 Sobic002G155000 Sobic002G155000 Sobic007G132200--Sobic002G155000 Sobic007G132200--Sobic001G290600 Sobic007G132200--Sobic001G283300 Sobic010G260000 Sobic010G260000 Sobic007G132200--Sobic010G260000 Sobic001G025800 Sobic001G025800 Sobic007G132200--Sobic001G025800 Sobic003G399100 Sobic003G399100 Sobic007G132200--Sobic003G399100 Sobic010G204900 Sobic010G204900 Sobic007G132200--Sobic010G204900 Sobic006G049900 Sobic006G049900 Sobic007G132200--Sobic006G049900 Sobic001G254600 Sobic001G254600 Sobic003G418200--Sobic001G254600 Sobic006G030100 Sobic006G030100 Sobic003G418200--Sobic006G030100 Sobic003G418200--Sobic007G100500 Sobic003G404000 Sobic003G404000 Sobic003G418200--Sobic003G404000 Sobic003G418200--Sobic001G290600 Sobic010G155600 Sobic010G155600 Sobic003G418200--Sobic010G155600 Sobic003G433300 Sobic003G433300 Sobic003G418200--Sobic003G433300 Sobic003G418200--Sobic001G283300 Sobic002G366300 Sobic002G366300 Sobic003G418200--Sobic002G366300 Sobic002G292800 Sobic002G292800 Sobic008G097600--Sobic002G292800 Sobic008G097600--Sobic010G155600 Sobic003G413100 Sobic003G413100 Sobic008G097600--Sobic003G413100 Sobic001G032200 Sobic001G032200 Sobic008G097600--Sobic001G032200 Sobic009G020100 Sobic009G020100 Sobic008G097600--Sobic009G020100 Sobic006G245900 Sobic006G245900 Sobic008G097600--Sobic006G245900 Sobic007G211800 Sobic007G211800 Sobic008G097600--Sobic007G211800 Sobic001G258900 Sobic001G258900 Sobic008G097600--Sobic001G258900 Sobic009G107300 Sobic009G107300 Sobic008G097600--Sobic009G107300 Sobic004G275600 Sobic004G275600 Sobic003G309300--Sobic004G275600 Sobic006G157000 Sobic006G157000 Sobic003G309300--Sobic006G157000 Sobic003G165101 Sobic003G165101 Sobic003G309300--Sobic003G165101 Sobic007G071900 Sobic007G071900 Sobic003G309300--Sobic007G071900 Sobic003G309300--Sobic008G038600 Sobic006G237000 Sobic006G237000 Sobic003G309300--Sobic006G237000 Sobic009G124000 Sobic009G124000 Sobic003G309300--Sobic009G124000 Sobic001G537500 Sobic001G537500 Sobic003G309300--Sobic001G537500 Sobic010G216300 Sobic010G216300 Sobic003G309300--Sobic010G216300 Sobic001G283300--Sobic007G132200 Sobic006G125500 Sobic006G125500 Sobic001G283300--Sobic006G125500 Sobic007G075800 Sobic007G075800 Sobic001G283300--Sobic007G075800 Sobic001G283300--Sobic002G155000 Sobic006G128400 Sobic006G128400 Sobic001G283300--Sobic006G128400 Sobic002G043100 Sobic002G043100 Sobic001G283300--Sobic002G043100 Sobic002G317100 Sobic002G317100 Sobic001G283300--Sobic002G317100 Sobic001G283300--Sobic010G260000 Sobic001G283300--Sobic003G399100 Sobic005G031000 Sobic005G031000 Sobic001G434700--Sobic005G031000 Sobic001G434700--Sobic006G237000 Sobic004G247100 Sobic004G247100 Sobic001G434700--Sobic004G247100 Sobic001G434700--Sobic010G155600 Sobic008G059900 Sobic008G059900 Sobic001G434700--Sobic008G059900 Sobic001G434700--Sobic009G020100 Sobic003G230600 Sobic003G230600 Sobic001G434700--Sobic003G230600 Sobic004G356200 Sobic004G356200 Sobic001G434700--Sobic004G356200 Sobic001G434700--Sobic008G097600 Sobic003G120300 Sobic003G120300 Sobic007G100500--Sobic003G120300 Sobic006G026250 Sobic006G026250 Sobic007G100500--Sobic006G026250 Sobic006G128300 Sobic006G128300 Sobic007G100500--Sobic006G128300 Sobic007G100500--Sobic007G075800 Sobic007G100500--Sobic003G418200 Sobic001G333500 Sobic001G333500 Sobic007G100500--Sobic001G333500 Sobic003G308500 Sobic003G308500 Sobic007G100500--Sobic003G308500 Sobic006G038500 Sobic006G038500 Sobic007G100500--Sobic006G038500 Sobic007G100500--Sobic007G132200 Sobic003G252700--Sobic010G130300 Sobic003G252700--Sobic001G290600 Sobic006G050000 Sobic006G050000 Sobic003G252700--Sobic006G050000 Sobic003G378400 Sobic003G378400 Sobic003G252700--Sobic003G378400 Sobic004G165000 Sobic004G165000 Sobic003G252700--Sobic004G165000 Sobic001G069600 Sobic001G069600 Sobic003G252700--Sobic001G069600 Sobic003G222500 Sobic003G222500 Sobic003G252700--Sobic003G222500 Sobic005G008600 Sobic005G008600 Sobic003G252700--Sobic005G008600 Sobic003G014000 Sobic003G014000 Sobic003G252700--Sobic003G014000 Sobic010G130300--Sobic004G165000 Sobic010G130300--Sobic002G155000 Sobic002G418600 Sobic002G418600 Sobic010G130300--Sobic002G418600 Sobic002G031700 Sobic002G031700 Sobic010G130300--Sobic002G031700 Sobic001G153300 Sobic001G153300 Sobic010G130300--Sobic001G153300 Sobic002G048200 Sobic002G048200 Sobic010G130300--Sobic002G048200 Sobic005G026000 Sobic005G026000 Sobic010G130300--Sobic005G026000 Sobic007G030800 Sobic007G030800 Sobic010G130300--Sobic007G030800 Sobic001G220000 Sobic001G220000 Sobic010G130300--Sobic001G220000
Octagon: transcription factors


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