Gene annotation
Transcriptome id Sobic.008G097600.3,Sobic.008G097600.2,Sobic.008G097600.1
Synonym Sb08g014890
Functional annotation cyclin-T1-4, putative, expressed
UniProt C5YNQ5
Pfam PF00134
Panther DB PTHR10026 PTHR10026:SF74
NCBI CDD KOG0834; CDK9 kinase-activating protein cyclin T
KEGG Orthology K15188; cyclin T
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity


Orthologs (automatic annotation)
TAIR AT5G45190 : Cyclin family protein
RAP-DB (Rice) LOC_Os12g30020.1 : cyclin-T1-4, putative, expressed
MaizeGDB (Corn) Zm00025a000790 , Zm00025a046579
Brachypodium -
Barley HORVU5Hr1G038970.14 , HORVU5Hr1G038970.18 , HORVU5Hr1G038970.19 , HORVU5Hr1G038970.12 , HORVU5Hr1G038970.16 , HORVU5Hr1G038970.17 , HORVU5Hr1G038970.15 , HORVU5Hr1G038970.13 , HORVU5Hr1G038970.10 , HORVU5Hr1G038970.11 , HORVU5Hr1G038970.1 , HORVU5Hr1G038970.2 , HORVU5Hr1G038970.3 , HORVU5Hr1G038970.4 , HORVU5Hr1G038970.5 , HORVU5Hr1G038970.8 , HORVU5Hr1G038970.9 , HORVU5Hr1G038970.6 , HORVU5Hr1G038970.7
Wheat TraesCS5B02G112100 , TraesCS5B02G112100 , TraesCS5D02G121900 , TraesCS5A02G103900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G292800 MORN repeat domain containing protein, expressed -
2 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
3 Sobic.003G413100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
4 Sobic.001G032200 transporter, major facilitator superfamily domain containing protein, expressed -
5 Sobic.009G020100 hydrolase, NUDIX family, domain containing protein, expressed -
6 Sobic.006G245900 FAR1 family protein, expressed -
7 Sobic.007G211800 kinase, pfkB family, putative, expressed -
8 Sobic.001G258900 - -
9 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
10 Sobic.003G378100 expressed protein K04730: interleukin-1 receptor-associated kinase 1
11 Sobic.002G263300 - -
12 Sobic.001G434700 phosphomevalonate kinase, putative, expressed K00938: E2.7.4.2, phosphomevalonate kinase
13 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
14 Sobic.001G125500 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
15 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
16 Sobic.007G210000 ribosomal L18p/L5e family protein, expressed -
17 Sobic.006G225100 OsFBDUF17 - F-box and DUF domain containing protein, expressed -
18 Sobic.003G214700 transcriptional corepressor LEUNIG, putative, expressed -
19 Sobic.001G290600 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
20 Sobic.007G027601 - -


Gene co-expression network
sample Sobic008G097600 Sobic008G097600 Sobic002G292800 Sobic002G292800 Sobic008G097600--Sobic002G292800 Sobic010G155600 Sobic010G155600 Sobic008G097600--Sobic010G155600 Sobic003G413100 Sobic003G413100 Sobic008G097600--Sobic003G413100 Sobic001G032200 Sobic001G032200 Sobic008G097600--Sobic001G032200 Sobic009G020100 Sobic009G020100 Sobic008G097600--Sobic009G020100 Sobic006G245900 Sobic006G245900 Sobic008G097600--Sobic006G245900 Sobic007G211800 Sobic007G211800 Sobic008G097600--Sobic007G211800 Sobic001G258900 Sobic001G258900 Sobic008G097600--Sobic001G258900 Sobic009G107300 Sobic009G107300 Sobic008G097600--Sobic009G107300 Sobic004G097900 Sobic004G097900 Sobic002G292800--Sobic004G097900 Sobic002G292800--Sobic006G245900 Sobic002G079100 Sobic002G079100 Sobic002G292800--Sobic002G079100 Sobic002G386900 Sobic002G386900 Sobic002G292800--Sobic002G386900 Sobic006G191200 Sobic006G191200 Sobic002G292800--Sobic006G191200 Sobic002G063900 Sobic002G063900 Sobic002G292800--Sobic002G063900 Sobic003G124600 Sobic003G124600 Sobic002G292800--Sobic003G124600 Sobic006G170900 Sobic006G170900 Sobic002G292800--Sobic006G170900 Sobic001G495400 Sobic001G495400 Sobic002G292800--Sobic001G495400 Sobic006G237000 Sobic006G237000 Sobic010G155600--Sobic006G237000 Sobic005G031000 Sobic005G031000 Sobic010G155600--Sobic005G031000 Sobic010G155600--Sobic008G097600 Sobic002G125800 Sobic002G125800 Sobic010G155600--Sobic002G125800 Sobic001G434700 Sobic001G434700 Sobic010G155600--Sobic001G434700 Sobic004G275600 Sobic004G275600 Sobic010G155600--Sobic004G275600 Sobic001G537500 Sobic001G537500 Sobic010G155600--Sobic001G537500 Sobic004G356200 Sobic004G356200 Sobic010G155600--Sobic004G356200 Sobic004G037200 Sobic004G037200 Sobic010G155600--Sobic004G037200 Sobic001G155400 Sobic001G155400 Sobic003G413100--Sobic001G155400 Sobic007G016900 Sobic007G016900 Sobic003G413100--Sobic007G016900 Sobic010G096000 Sobic010G096000 Sobic003G413100--Sobic010G096000 Sobic001G373400 Sobic001G373400 Sobic003G413100--Sobic001G373400 Sobic003G413100--Sobic002G292800 Sobic003G413100--Sobic006G245900 Sobic004G345400 Sobic004G345400 Sobic003G413100--Sobic004G345400 Sobic009G040800 Sobic009G040800 Sobic003G413100--Sobic009G040800 Sobic001G042200 Sobic001G042200 Sobic003G413100--Sobic001G042200 Sobic008G011300 Sobic008G011300 Sobic001G032200--Sobic008G011300 Sobic010G204900 Sobic010G204900 Sobic001G032200--Sobic010G204900 Sobic001G032200--Sobic007G211800 Sobic001G032200--Sobic001G495400 Sobic004G162500 Sobic004G162500 Sobic001G032200--Sobic004G162500 Sobic009G160500 Sobic009G160500 Sobic001G032200--Sobic009G160500 Sobic001G346600 Sobic001G346600 Sobic001G032200--Sobic001G346600 Sobic002G138300 Sobic002G138300 Sobic001G032200--Sobic002G138300 Sobic001G025800 Sobic001G025800 Sobic001G032200--Sobic001G025800 Sobic009G020100--Sobic001G434700 Sobic008G059900 Sobic008G059900 Sobic009G020100--Sobic008G059900 Sobic003G360300 Sobic003G360300 Sobic009G020100--Sobic003G360300 Sobic009G020100--Sobic008G097600 Sobic007G047600 Sobic007G047600 Sobic009G020100--Sobic007G047600 Sobic009G195700 Sobic009G195700 Sobic009G020100--Sobic009G195700 Sobic009G020100--Sobic004G356200 Sobic002G264300 Sobic002G264300 Sobic009G020100--Sobic002G264300 Sobic004G247100 Sobic004G247100 Sobic009G020100--Sobic004G247100 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic006G245900--Sobic007G016900 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic007G211800--Sobic001G032200 Sobic007G211800--Sobic008G011300 Sobic007G211800--Sobic001G025800 Sobic007G211800--Sobic010G204900 Sobic007G211800--Sobic001G495400 Sobic007G030800 Sobic007G030800 Sobic007G211800--Sobic007G030800 Sobic007G211800--Sobic008G097600 Sobic010G221600 Sobic010G221600 Sobic007G211800--Sobic010G221600 Sobic007G090537 Sobic007G090537 Sobic007G211800--Sobic007G090537 Sobic002G162500 Sobic002G162500 Sobic001G258900--Sobic002G162500 Sobic010G172000 Sobic010G172000 Sobic001G258900--Sobic010G172000 Sobic003G341700 Sobic003G341700 Sobic001G258900--Sobic003G341700 Sobic009G107080 Sobic009G107080 Sobic001G258900--Sobic009G107080 Sobic006G063001 Sobic006G063001 Sobic001G258900--Sobic006G063001 Sobic001G258900--Sobic008G097600 Sobic001G300900 Sobic001G300900 Sobic001G258900--Sobic001G300900 Sobic008G092532 Sobic008G092532 Sobic001G258900--Sobic008G092532 Sobic003G311600 Sobic003G311600 Sobic001G258900--Sobic003G311600 Sobic009G228000 Sobic009G228000 Sobic009G107300--Sobic009G228000 Sobic007G087000 Sobic007G087000 Sobic009G107300--Sobic007G087000 Sobic004G240400 Sobic004G240400 Sobic009G107300--Sobic004G240400 Sobic008G116700 Sobic008G116700 Sobic009G107300--Sobic008G116700 Sobic003G043000 Sobic003G043000 Sobic009G107300--Sobic003G043000 Sobic004G198600 Sobic004G198600 Sobic009G107300--Sobic004G198600 Sobic003G120300 Sobic003G120300 Sobic009G107300--Sobic003G120300 Sobic003G181700 Sobic003G181700 Sobic009G107300--Sobic003G181700 Sobic001G156900 Sobic001G156900 Sobic009G107300--Sobic001G156900
Octagon: transcription factors


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