Gene annotation
Transcriptome id Sobic.007G027601.2,Sobic.007G027601.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8W0
Pfam PF00646
Panther DB PTHR31639 PTHR31639:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G58900 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os06g49930.1 : OsFBX207 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G204100 expressed protein -
2 Sobic.005G216800 RNA recognition motif containing protein, expressed -
3 Sobic.001G052100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
4 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
5 Sobic.001G203600 PPR repeat domain containing protein, putative, expressed -
6 Sobic.005G123400 expressed protein -
7 Sobic.003G194800 EF hand family protein, putative, expressed -
8 Sobic.002G399300 expressed protein -
9 Sobic.010G147500 tryptophan biosynthesis protein trpCF, putative, expressed K01817: phosphoribosylanthranilate isomerase
10 Sobic.008G097600 cyclin-T1-4, putative, expressed K15188: cyclin T
11 Sobic.003G368400 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
12 Sobic.010G274800 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
13 Sobic.002G342300 exostosin family domain containing protein, expressed -
14 Sobic.003G420400 - -
15 Sobic.003G402900 HYS1, putative, expressed -
16 Sobic.004G111600 - -
17 Sobic.004G089450 - -
18 Sobic.002G138300 expressed protein -
19 Sobic.006G012300 3-5 exonuclease domain-containing protein, putative, expressed -
20 Sobic.010G112600 integral membrane protein, putative, expressed -


Gene co-expression network
sample Sobic007G027601 Sobic007G027601 Sobic003G204100 Sobic003G204100 Sobic007G027601--Sobic003G204100 Sobic005G216800 Sobic005G216800 Sobic007G027601--Sobic005G216800 Sobic001G052100 Sobic001G052100 Sobic007G027601--Sobic001G052100 Sobic006G237500 Sobic006G237500 Sobic007G027601--Sobic006G237500 Sobic001G203600 Sobic001G203600 Sobic007G027601--Sobic001G203600 Sobic005G123400 Sobic005G123400 Sobic007G027601--Sobic005G123400 Sobic003G194800 Sobic003G194800 Sobic007G027601--Sobic003G194800 Sobic002G399300 Sobic002G399300 Sobic007G027601--Sobic002G399300 Sobic010G147500 Sobic010G147500 Sobic007G027601--Sobic010G147500 Sobic008G047500 Sobic008G047500 Sobic003G204100--Sobic008G047500 Sobic003G204100--Sobic003G194800 Sobic003G045450 Sobic003G045450 Sobic003G204100--Sobic003G045450 Sobic004G298600 Sobic004G298600 Sobic003G204100--Sobic004G298600 Sobic008G085950 Sobic008G085950 Sobic003G204100--Sobic008G085950 Sobic002G173400 Sobic002G173400 Sobic003G204100--Sobic002G173400 Sobic010G143600 Sobic010G143600 Sobic003G204100--Sobic010G143600 Sobic001G117900 Sobic001G117900 Sobic003G204100--Sobic001G117900 Sobic007G102000 Sobic007G102000 Sobic003G204100--Sobic007G102000 Sobic005G216800--Sobic006G237500 Sobic005G216800--Sobic005G123400 Sobic002G342300 Sobic002G342300 Sobic005G216800--Sobic002G342300 Sobic010G237650 Sobic010G237650 Sobic005G216800--Sobic010G237650 Sobic002G235900 Sobic002G235900 Sobic005G216800--Sobic002G235900 Sobic009G102000 Sobic009G102000 Sobic005G216800--Sobic009G102000 Sobic003G397100 Sobic003G397100 Sobic005G216800--Sobic003G397100 Sobic005G216800--Sobic003G194800 Sobic006G170900 Sobic006G170900 Sobic005G216800--Sobic006G170900 Sobic001G052100--Sobic005G123400 Sobic008G039000 Sobic008G039000 Sobic001G052100--Sobic008G039000 Sobic001G052100--Sobic001G203600 Sobic010G112600 Sobic010G112600 Sobic001G052100--Sobic010G112600 Sobic001G052100--Sobic006G237500 Sobic006G262800 Sobic006G262800 Sobic001G052100--Sobic006G262800 Sobic009G227100 Sobic009G227100 Sobic001G052100--Sobic009G227100 Sobic001G478900 Sobic001G478900 Sobic001G052100--Sobic001G478900 Sobic008G095900 Sobic008G095900 Sobic001G052100--Sobic008G095900 Sobic006G237500--Sobic005G123400 Sobic003G393200 Sobic003G393200 Sobic006G237500--Sobic003G393200 Sobic007G030100 Sobic007G030100 Sobic006G237500--Sobic007G030100 Sobic006G237500--Sobic010G112600 Sobic004G353300 Sobic004G353300 Sobic006G237500--Sobic004G353300 Sobic006G237500--Sobic001G052100 Sobic001G051400 Sobic001G051400 Sobic006G237500--Sobic001G051400 Sobic006G237500--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic006G237500--Sobic004G215600 Sobic010G086300 Sobic010G086300 Sobic001G203600--Sobic010G086300 Sobic001G203600--Sobic001G117900 Sobic007G204000 Sobic007G204000 Sobic001G203600--Sobic007G204000 Sobic001G203600--Sobic001G052100 Sobic008G072500 Sobic008G072500 Sobic001G203600--Sobic008G072500 Sobic007G226800 Sobic007G226800 Sobic001G203600--Sobic007G226800 Sobic002G182000 Sobic002G182000 Sobic001G203600--Sobic002G182000 Sobic006G220400 Sobic006G220400 Sobic001G203600--Sobic006G220400 Sobic009G063800 Sobic009G063800 Sobic001G203600--Sobic009G063800 Sobic005G123400--Sobic006G237500 Sobic005G123400--Sobic010G112600 Sobic005G123400--Sobic003G393200 Sobic001G043200 Sobic001G043200 Sobic005G123400--Sobic001G043200 Sobic005G123400--Sobic009G227100 Sobic009G252300 Sobic009G252300 Sobic005G123400--Sobic009G252300 Sobic005G123400--Sobic007G030100 Sobic003G190200 Sobic003G190200 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic003G194800--Sobic008G085950 Sobic003G194800--Sobic008G047500 Sobic009G120400 Sobic009G120400 Sobic003G194800--Sobic009G120400 Sobic003G194800--Sobic003G204100 Sobic003G194800--Sobic002G173400 Sobic003G299500 Sobic003G299500 Sobic003G194800--Sobic003G299500 Sobic007G105700 Sobic007G105700 Sobic003G194800--Sobic007G105700 Sobic003G194800--Sobic004G215600 Sobic003G420400 Sobic003G420400 Sobic003G194800--Sobic003G420400 Sobic002G399300--Sobic009G120400 Sobic002G399300--Sobic010G143600 Sobic001G534466 Sobic001G534466 Sobic002G399300--Sobic001G534466 Sobic002G078100 Sobic002G078100 Sobic002G399300--Sobic002G078100 Sobic002G399300--Sobic001G051400 Sobic002G399300--Sobic003G194800 Sobic002G399300--Sobic002G173400 Sobic008G087200 Sobic008G087200 Sobic002G399300--Sobic008G087200 Sobic002G399300--Sobic003G204100 Sobic010G147500--Sobic001G117900 Sobic001G529500 Sobic001G529500 Sobic010G147500--Sobic001G529500 Sobic010G188900 Sobic010G188900 Sobic010G147500--Sobic010G188900 Sobic002G308000 Sobic002G308000 Sobic010G147500--Sobic002G308000 Sobic001G440000 Sobic001G440000 Sobic010G147500--Sobic001G440000 Sobic010G147500--Sobic003G204100 Sobic006G095000 Sobic006G095000 Sobic010G147500--Sobic006G095000 Sobic001G248400 Sobic001G248400 Sobic010G147500--Sobic001G248400 Sobic010G147500--Sobic004G298600
Octagon: transcription factors


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