Gene annotation
Transcriptome id Sobic.006G225100.1,Sobic.006G225100.3
Synonym Sb06g029410
Functional annotation OsFBDUF17 - F-box and DUF domain containing protein, expressed
UniProt A0A1Z5RF58 , A0A1Z5RF44
Pfam PF03478 PF12937 PF03478
Panther DB PTHR11102 PTHR11102:SF105
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G25290 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os11g37390.1,LOC_Os03g51090.1 : OsFBDUF17 - F-box and DUF domain containing protein, expressed,OsFBDUF54 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009690 , Zm00025a009661 , Zm00025a009685 , Zm00025a009686 , Zm00025a009687
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G279300 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed -
2 Sobic.001G032200 transporter, major facilitator superfamily domain containing protein, expressed -
3 Sobic.008G011300 GIY-YIG catalytic domain containing protein, putative, expressed K15078: structure-specific endonuclease subunit SLX1
4 Sobic.008G097600 cyclin-T1-4, putative, expressed K15188: cyclin T
5 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
6 Sobic.002G239601 - -
7 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
8 Sobic.006G012300 3-5 exonuclease domain-containing protein, putative, expressed -
9 Sobic.001G250700 expressed protein -
10 Sobic.001G063800 ML domain protein, putative, expressed -
11 Sobic.002G386600 heat shock protein DnaJ, putative, expressed -
12 Sobic.002G060700 OsFBX237 - F-box domain containing protein, expressed -
13 Sobic.007G070000 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
14 Sobic.009G260700 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
15 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
16 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
17 Sobic.010G109400 acylphosphatase, putative, expressed K01512: acylphosphatase
18 Sobic.007G159200 PWWP domain containing protein, expressed -
19 Sobic.004G356200 expressed protein -
20 Sobic.002G388000 SNARE associated Golgi protein, putative, expressed -


Gene co-expression network
sample Sobic006G225100 Sobic006G225100 Sobic010G279300 Sobic010G279300 Sobic006G225100--Sobic010G279300 Sobic001G032200 Sobic001G032200 Sobic006G225100--Sobic001G032200 Sobic008G011300 Sobic008G011300 Sobic006G225100--Sobic008G011300 Sobic008G097600 Sobic008G097600 Sobic006G225100--Sobic008G097600 Sobic009G107300 Sobic009G107300 Sobic006G225100--Sobic009G107300 Sobic002G239601 Sobic002G239601 Sobic006G225100--Sobic002G239601 Sobic001G495400 Sobic001G495400 Sobic006G225100--Sobic001G495400 Sobic006G012300 Sobic006G012300 Sobic006G225100--Sobic006G012300 Sobic001G250700 Sobic001G250700 Sobic006G225100--Sobic001G250700 Sobic008G123300 Sobic008G123300 Sobic010G279300--Sobic008G123300 Sobic010G279300--Sobic002G239601 Sobic010G279300--Sobic006G225100 Sobic001G300900 Sobic001G300900 Sobic010G279300--Sobic001G300900 Sobic007G070000 Sobic007G070000 Sobic010G279300--Sobic007G070000 Sobic008G125100 Sobic008G125100 Sobic010G279300--Sobic008G125100 Sobic010G279300--Sobic001G495400 Sobic006G273900 Sobic006G273900 Sobic010G279300--Sobic006G273900 Sobic008G058000 Sobic008G058000 Sobic010G279300--Sobic008G058000 Sobic001G032200--Sobic008G011300 Sobic010G204900 Sobic010G204900 Sobic001G032200--Sobic010G204900 Sobic007G211800 Sobic007G211800 Sobic001G032200--Sobic007G211800 Sobic001G032200--Sobic001G495400 Sobic004G162500 Sobic004G162500 Sobic001G032200--Sobic004G162500 Sobic009G160500 Sobic009G160500 Sobic001G032200--Sobic009G160500 Sobic001G346600 Sobic001G346600 Sobic001G032200--Sobic001G346600 Sobic002G138300 Sobic002G138300 Sobic001G032200--Sobic002G138300 Sobic001G025800 Sobic001G025800 Sobic001G032200--Sobic001G025800 Sobic008G011300--Sobic001G032200 Sobic008G011300--Sobic007G211800 Sobic008G011300--Sobic010G204900 Sobic001G478600 Sobic001G478600 Sobic008G011300--Sobic001G478600 Sobic001G063800 Sobic001G063800 Sobic008G011300--Sobic001G063800 Sobic008G011300--Sobic001G495400 Sobic010G221600 Sobic010G221600 Sobic008G011300--Sobic010G221600 Sobic002G189600 Sobic002G189600 Sobic008G011300--Sobic002G189600 Sobic002G388000 Sobic002G388000 Sobic008G011300--Sobic002G388000 Sobic002G292800 Sobic002G292800 Sobic008G097600--Sobic002G292800 Sobic010G155600 Sobic010G155600 Sobic008G097600--Sobic010G155600 Sobic003G413100 Sobic003G413100 Sobic008G097600--Sobic003G413100 Sobic008G097600--Sobic001G032200 Sobic009G020100 Sobic009G020100 Sobic008G097600--Sobic009G020100 Sobic006G245900 Sobic006G245900 Sobic008G097600--Sobic006G245900 Sobic008G097600--Sobic007G211800 Sobic001G258900 Sobic001G258900 Sobic008G097600--Sobic001G258900 Sobic008G097600--Sobic009G107300 Sobic009G228000 Sobic009G228000 Sobic009G107300--Sobic009G228000 Sobic007G087000 Sobic007G087000 Sobic009G107300--Sobic007G087000 Sobic004G240400 Sobic004G240400 Sobic009G107300--Sobic004G240400 Sobic008G116700 Sobic008G116700 Sobic009G107300--Sobic008G116700 Sobic003G043000 Sobic003G043000 Sobic009G107300--Sobic003G043000 Sobic004G198600 Sobic004G198600 Sobic009G107300--Sobic004G198600 Sobic003G120300 Sobic003G120300 Sobic009G107300--Sobic003G120300 Sobic003G181700 Sobic003G181700 Sobic009G107300--Sobic003G181700 Sobic001G156900 Sobic001G156900 Sobic009G107300--Sobic001G156900 Sobic002G386900 Sobic002G386900 Sobic002G239601--Sobic002G386900 Sobic001G123600 Sobic001G123600 Sobic002G239601--Sobic001G123600 Sobic002G386600 Sobic002G386600 Sobic002G239601--Sobic002G386600 Sobic004G356200 Sobic004G356200 Sobic002G239601--Sobic004G356200 Sobic007G034200 Sobic007G034200 Sobic002G239601--Sobic007G034200 Sobic002G239601--Sobic008G123300 Sobic003G360300 Sobic003G360300 Sobic002G239601--Sobic003G360300 Sobic003G299500 Sobic003G299500 Sobic002G239601--Sobic003G299500 Sobic001G200200 Sobic001G200200 Sobic002G239601--Sobic001G200200 Sobic004G097900 Sobic004G097900 Sobic001G495400--Sobic004G097900 Sobic001G495400--Sobic002G386900 Sobic001G495400--Sobic002G292800 Sobic001G495400--Sobic001G032200 Sobic006G170900 Sobic006G170900 Sobic001G495400--Sobic006G170900 Sobic002G122100 Sobic002G122100 Sobic001G495400--Sobic002G122100 Sobic004G106250 Sobic004G106250 Sobic001G495400--Sobic004G106250 Sobic001G417500 Sobic001G417500 Sobic001G495400--Sobic001G417500 Sobic003G124600 Sobic003G124600 Sobic001G495400--Sobic003G124600 Sobic009G040250 Sobic009G040250 Sobic006G012300--Sobic009G040250 Sobic007G105700 Sobic007G105700 Sobic006G012300--Sobic007G105700 Sobic003G420400 Sobic003G420400 Sobic006G012300--Sobic003G420400 Sobic006G119900 Sobic006G119900 Sobic006G012300--Sobic006G119900 Sobic010G274800 Sobic010G274800 Sobic006G012300--Sobic010G274800 Sobic009G040325 Sobic009G040325 Sobic006G012300--Sobic009G040325 Sobic002G392400 Sobic002G392400 Sobic006G012300--Sobic002G392400 Sobic006G220400 Sobic006G220400 Sobic006G012300--Sobic006G220400 Sobic005G087300 Sobic005G087300 Sobic006G012300--Sobic005G087300 Sobic001G155400 Sobic001G155400 Sobic001G250700--Sobic001G155400 Sobic010G237900 Sobic010G237900 Sobic001G250700--Sobic010G237900 Sobic001G250700--Sobic009G228000 Sobic010G145800 Sobic010G145800 Sobic001G250700--Sobic010G145800 Sobic001G248100 Sobic001G248100 Sobic001G250700--Sobic001G248100 Sobic001G250700--Sobic009G107300 Sobic008G000400 Sobic008G000400 Sobic001G250700--Sobic008G000400 Sobic001G250700--Sobic010G204900 Sobic006G039400 Sobic006G039400 Sobic001G250700--Sobic006G039400
Octagon: transcription factors


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