Gene annotation
Transcriptome id Sobic.007G159200.1,Sobic.007G159200.2
Synonym Sb07g023270
Functional annotation PWWP domain containing protein, expressed
UniProt A0A1B6PI22 , A0A1B6PI23
Pfam PF00855
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G27650 : Tudor/PWWP/MBT superfamily protein
RAP-DB (Rice) LOC_Os08g37280.1 : PWWP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005456
Brachypodium -
Barley HORVU6Hr1G016610.2 , HORVU6Hr1G016610.3 , HORVU6Hr1G016610.4
Wheat TraesCS6B02G120700 , TraesCS6B02G120700 , TraesCS6A02G092200 , TraesCS6A02G092200 , TraesCS6D02G081100 , TraesCS6D02G081100
Populus -


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cDNA sequences
Sobic.007G159200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G080500 expressed protein -
2 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
3 Sobic.006G280100 SET domain containing protein, expressed -
4 Sobic.010G051400 zinc finger protein, putative, expressed K04706: E3 SUMO-protein ligase PIAS1
5 Sobic.004G355800 expressed protein -
6 Sobic.002G425200 expressed protein -
7 Sobic.010G262100 expressed protein -
8 Sobic.001G300000 - -
9 Sobic.009G007700 expressed protein -
10 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
11 Sobic.003G209400 expressed protein -
12 Sobic.006G271700 L-asparaginase precursor protein, putative, expressed K08657: taspase, threonine aspartase, 1
13 Sobic.002G203500 protein binding protein, putative, expressed -
14 Sobic.005G200900 SCC3, putative, expressed K06671: STAG1_2, SCC3, cohesin complex subunit SA-1/2
15 Sobic.003G250900 AAA-type ATPase family protein, putative, expressed -
16 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
17 Sobic.007G047600 expressed protein -
18 Sobic.004G155600 dnaJ domain containing protein, expressed -
19 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
20 Sobic.003G311500 double-stranded RNA binding motif containing protein, expressed -


Gene co-expression network
sample Sobic007G159200 Sobic007G159200 Sobic008G080500 Sobic008G080500 Sobic007G159200--Sobic008G080500 Sobic001G248100 Sobic001G248100 Sobic007G159200--Sobic001G248100 Sobic006G280100 Sobic006G280100 Sobic007G159200--Sobic006G280100 Sobic010G051400 Sobic010G051400 Sobic007G159200--Sobic010G051400 Sobic004G355800 Sobic004G355800 Sobic007G159200--Sobic004G355800 Sobic002G425200 Sobic002G425200 Sobic007G159200--Sobic002G425200 Sobic010G262100 Sobic010G262100 Sobic007G159200--Sobic010G262100 Sobic001G300000 Sobic001G300000 Sobic007G159200--Sobic001G300000 Sobic009G007700 Sobic009G007700 Sobic007G159200--Sobic009G007700 Sobic008G080500--Sobic007G159200 Sobic008G080500--Sobic010G262100 Sobic008G080500--Sobic004G355800 Sobic006G112700 Sobic006G112700 Sobic008G080500--Sobic006G112700 Sobic002G079100 Sobic002G079100 Sobic008G080500--Sobic002G079100 Sobic005G200900 Sobic005G200900 Sobic008G080500--Sobic005G200900 Sobic010G269300 Sobic010G269300 Sobic008G080500--Sobic010G269300 Sobic003G299500 Sobic003G299500 Sobic008G080500--Sobic003G299500 Sobic002G235900 Sobic002G235900 Sobic008G080500--Sobic002G235900 Sobic002G412700 Sobic002G412700 Sobic001G248100--Sobic002G412700 Sobic010G000800 Sobic010G000800 Sobic001G248100--Sobic010G000800 Sobic007G145400 Sobic007G145400 Sobic001G248100--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G248100--Sobic005G115500 Sobic001G248100--Sobic010G262100 Sobic006G261400 Sobic006G261400 Sobic001G248100--Sobic006G261400 Sobic002G160700 Sobic002G160700 Sobic001G248100--Sobic002G160700 Sobic004G155600 Sobic004G155600 Sobic001G248100--Sobic004G155600 Sobic003G405500 Sobic003G405500 Sobic001G248100--Sobic003G405500 Sobic009G190200 Sobic009G190200 Sobic006G280100--Sobic009G190200 Sobic002G219900 Sobic002G219900 Sobic006G280100--Sobic002G219900 Sobic004G043750 Sobic004G043750 Sobic006G280100--Sobic004G043750 Sobic004G038100 Sobic004G038100 Sobic006G280100--Sobic004G038100 Sobic006G280100--Sobic007G159200 Sobic003G135500 Sobic003G135500 Sobic006G280100--Sobic003G135500 Sobic007G125700 Sobic007G125700 Sobic006G280100--Sobic007G125700 Sobic006G280100--Sobic002G079100 Sobic006G280100--Sobic008G080500 Sobic010G051400--Sobic010G269300 Sobic010G051400--Sobic007G159200 Sobic010G051400--Sobic008G080500 Sobic001G051700 Sobic001G051700 Sobic010G051400--Sobic001G051700 Sobic009G129600 Sobic009G129600 Sobic010G051400--Sobic009G129600 Sobic009G003700 Sobic009G003700 Sobic010G051400--Sobic009G003700 Sobic007G183300 Sobic007G183300 Sobic010G051400--Sobic007G183300 Sobic002G145800 Sobic002G145800 Sobic010G051400--Sobic002G145800 Sobic010G077500 Sobic010G077500 Sobic010G051400--Sobic010G077500 Sobic004G355800--Sobic005G200900 Sobic006G118700 Sobic006G118700 Sobic004G355800--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G355800--Sobic006G210000 Sobic002G154000 Sobic002G154000 Sobic004G355800--Sobic002G154000 Sobic004G355800--Sobic004G155600 Sobic005G191900 Sobic005G191900 Sobic004G355800--Sobic005G191900 Sobic006G067600 Sobic006G067600 Sobic004G355800--Sobic006G067600 Sobic004G156500 Sobic004G156500 Sobic004G355800--Sobic004G156500 Sobic008G002500 Sobic008G002500 Sobic004G355800--Sobic008G002500 Sobic003G177000 Sobic003G177000 Sobic002G425200--Sobic003G177000 Sobic002G425200--Sobic007G159200 Sobic008G038200 Sobic008G038200 Sobic002G425200--Sobic008G038200 Sobic008G088842 Sobic008G088842 Sobic002G425200--Sobic008G088842 Sobic002G425200--Sobic006G280100 Sobic004G199200 Sobic004G199200 Sobic002G425200--Sobic004G199200 Sobic006G067700 Sobic006G067700 Sobic002G425200--Sobic006G067700 Sobic002G425200--Sobic008G080500 Sobic002G425200--Sobic006G112700 Sobic001G451300 Sobic001G451300 Sobic010G262100--Sobic001G451300 Sobic010G138900 Sobic010G138900 Sobic010G262100--Sobic010G138900 Sobic010G262100--Sobic001G248100 Sobic010G262100--Sobic008G080500 Sobic002G043100 Sobic002G043100 Sobic010G262100--Sobic002G043100 Sobic002G399800 Sobic002G399800 Sobic010G262100--Sobic002G399800 Sobic002G371600 Sobic002G371600 Sobic010G262100--Sobic002G371600 Sobic003G314700 Sobic003G314700 Sobic010G262100--Sobic003G314700 Sobic008G092800 Sobic008G092800 Sobic010G262100--Sobic008G092800 Sobic001G300000--Sobic003G177000 Sobic001G541000 Sobic001G541000 Sobic001G300000--Sobic001G541000 Sobic007G209600 Sobic007G209600 Sobic001G300000--Sobic007G209600 Sobic001G300000--Sobic007G159200 Sobic007G184100 Sobic007G184100 Sobic001G300000--Sobic007G184100 Sobic001G300000--Sobic008G080500 Sobic001G300000--Sobic006G280100 Sobic001G300000--Sobic003G135500 Sobic001G211500 Sobic001G211500 Sobic001G300000--Sobic001G211500 Sobic003G209400 Sobic003G209400 Sobic009G007700--Sobic003G209400 Sobic010G085200 Sobic010G085200 Sobic009G007700--Sobic010G085200 Sobic003G127500 Sobic003G127500 Sobic009G007700--Sobic003G127500 Sobic009G007700--Sobic004G155600 Sobic004G034700 Sobic004G034700 Sobic009G007700--Sobic004G034700 Sobic009G007700--Sobic006G210000 Sobic009G007700--Sobic002G412700 Sobic009G007700--Sobic008G080500 Sobic002G357100 Sobic002G357100 Sobic009G007700--Sobic002G357100
Octagon: transcription factors


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