Gene annotation
Transcriptome id Sobic.002G203500.4,Sobic.002G203500.2,Sobic.002G203500.1,Sobic.002G203500.3
Synonym Sb02g024810
Functional annotation protein binding protein, putative, expressed
UniProt A0A1W0W581 , A0A1W0W558 , C5XCV2
Pfam PF13923 PF01485 PF00097 PF01485
Panther DB PTHR11685 PTHR11685:SF141
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity GO:0016567protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT3G53690 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os09g25190.1 : protein binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a047010
Brachypodium -
Barley HORVU5Hr1G065280.1 , HORVU5Hr1G065280.2 , HORVU5Hr1G065280.3 , HORVU5Hr1G065280.4 , HORVU5Hr1G065280.5 , HORVU5Hr1G065280.8 , HORVU5Hr1G065280.9
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G159200 PWWP domain containing protein, expressed -
2 Sobic.009G141700 expressed protein -
3 Sobic.007G128100 expressed protein -
4 Sobic.004G352100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
5 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
6 Sobic.001G043500 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
7 Sobic.007G023100 CCT motif family protein, expressed -
8 Sobic.007G161600 SET domain containing protein, expressed -
9 Sobic.002G425200 expressed protein -
10 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
11 Sobic.002G430900 PWWP domain containing protein, expressed -
12 Sobic.005G022300 - -
13 Sobic.001G300000 - -
14 Sobic.010G026100 expressed protein -
15 Sobic.003G323300 expressed protein -
16 Sobic.008G045000 expressed protein -
17 Sobic.008G080500 expressed protein -
18 Sobic.006G179300 OsFBX64 - F-box domain containing protein, expressed -
19 Sobic.007G209600 ENT domain containing protein, expressed -
20 Sobic.003G027800 protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G203500 Sobic002G203500 Sobic007G159200 Sobic007G159200 Sobic002G203500--Sobic007G159200 Sobic009G141700 Sobic009G141700 Sobic002G203500--Sobic009G141700 Sobic007G128100 Sobic007G128100 Sobic002G203500--Sobic007G128100 Sobic004G352100 Sobic004G352100 Sobic002G203500--Sobic004G352100 Sobic007G125700 Sobic007G125700 Sobic002G203500--Sobic007G125700 Sobic001G043500 Sobic001G043500 Sobic002G203500--Sobic001G043500 Sobic007G023100 Sobic007G023100 Sobic002G203500--Sobic007G023100 Sobic007G161600 Sobic007G161600 Sobic002G203500--Sobic007G161600 Sobic002G425200 Sobic002G425200 Sobic002G203500--Sobic002G425200 Sobic008G080500 Sobic008G080500 Sobic007G159200--Sobic008G080500 Sobic001G248100 Sobic001G248100 Sobic007G159200--Sobic001G248100 Sobic006G280100 Sobic006G280100 Sobic007G159200--Sobic006G280100 Sobic010G051400 Sobic010G051400 Sobic007G159200--Sobic010G051400 Sobic004G355800 Sobic004G355800 Sobic007G159200--Sobic004G355800 Sobic007G159200--Sobic002G425200 Sobic010G262100 Sobic010G262100 Sobic007G159200--Sobic010G262100 Sobic001G300000 Sobic001G300000 Sobic007G159200--Sobic001G300000 Sobic009G007700 Sobic009G007700 Sobic007G159200--Sobic009G007700 Sobic001G079900 Sobic001G079900 Sobic009G141700--Sobic001G079900 Sobic001G384700 Sobic001G384700 Sobic009G141700--Sobic001G384700 Sobic002G216600 Sobic002G216600 Sobic009G141700--Sobic002G216600 Sobic008G169400 Sobic008G169400 Sobic009G141700--Sobic008G169400 Sobic003G323300 Sobic003G323300 Sobic009G141700--Sobic003G323300 Sobic006G046600 Sobic006G046600 Sobic009G141700--Sobic006G046600 Sobic005G062600 Sobic005G062600 Sobic009G141700--Sobic005G062600 Sobic006G067700 Sobic006G067700 Sobic009G141700--Sobic006G067700 Sobic006G022400 Sobic006G022400 Sobic009G141700--Sobic006G022400 Sobic007G128100--Sobic007G023100 Sobic007G128100--Sobic005G062600 Sobic007G128100--Sobic007G161600 Sobic008G038200 Sobic008G038200 Sobic007G128100--Sobic008G038200 Sobic001G298800 Sobic001G298800 Sobic007G128100--Sobic001G298800 Sobic003G027800 Sobic003G027800 Sobic007G128100--Sobic003G027800 Sobic003G019900 Sobic003G019900 Sobic007G128100--Sobic003G019900 Sobic008G151600 Sobic008G151600 Sobic007G128100--Sobic008G151600 Sobic003G008800 Sobic003G008800 Sobic007G128100--Sobic003G008800 Sobic007G209600 Sobic007G209600 Sobic004G352100--Sobic007G209600 Sobic004G352100--Sobic002G203500 Sobic010G026100 Sobic010G026100 Sobic004G352100--Sobic010G026100 Sobic002G184400 Sobic002G184400 Sobic004G352100--Sobic002G184400 Sobic004G352100--Sobic008G151600 Sobic007G070200 Sobic007G070200 Sobic004G352100--Sobic007G070200 Sobic009G087700 Sobic009G087700 Sobic004G352100--Sobic009G087700 Sobic004G352100--Sobic007G161600 Sobic006G202100 Sobic006G202100 Sobic004G352100--Sobic006G202100 Sobic002G430900 Sobic002G430900 Sobic007G125700--Sobic002G430900 Sobic004G207000 Sobic004G207000 Sobic007G125700--Sobic004G207000 Sobic010G149600 Sobic010G149600 Sobic007G125700--Sobic010G149600 Sobic010G269300 Sobic010G269300 Sobic007G125700--Sobic010G269300 Sobic002G219900 Sobic002G219900 Sobic007G125700--Sobic002G219900 Sobic003G077500 Sobic003G077500 Sobic007G125700--Sobic003G077500 Sobic001G395200 Sobic001G395200 Sobic007G125700--Sobic001G395200 Sobic004G043750 Sobic004G043750 Sobic007G125700--Sobic004G043750 Sobic007G125700--Sobic006G280100 Sobic001G043500--Sobic007G161600 Sobic005G162900 Sobic005G162900 Sobic001G043500--Sobic005G162900 Sobic002G078900 Sobic002G078900 Sobic001G043500--Sobic002G078900 Sobic002G205000 Sobic002G205000 Sobic001G043500--Sobic002G205000 Sobic007G121700 Sobic007G121700 Sobic001G043500--Sobic007G121700 Sobic007G033700 Sobic007G033700 Sobic001G043500--Sobic007G033700 Sobic001G463301 Sobic001G463301 Sobic001G043500--Sobic001G463301 Sobic003G091200 Sobic003G091200 Sobic001G043500--Sobic003G091200 Sobic002G178700 Sobic002G178700 Sobic001G043500--Sobic002G178700 Sobic003G090600 Sobic003G090600 Sobic007G023100--Sobic003G090600 Sobic007G147200 Sobic007G147200 Sobic007G023100--Sobic007G147200 Sobic002G430700 Sobic002G430700 Sobic007G023100--Sobic002G430700 Sobic006G107500 Sobic006G107500 Sobic007G023100--Sobic006G107500 Sobic007G023100--Sobic005G062600 Sobic007G023100--Sobic007G033700 Sobic007G023100--Sobic003G019900 Sobic007G023100--Sobic007G128100 Sobic006G163300 Sobic006G163300 Sobic007G023100--Sobic006G163300 Sobic007G161600--Sobic008G151600 Sobic007G161600--Sobic005G062600 Sobic007G161600--Sobic007G147200 Sobic007G161600--Sobic001G043500 Sobic007G161600--Sobic003G019900 Sobic010G092400 Sobic010G092400 Sobic007G161600--Sobic010G092400 Sobic007G161600--Sobic006G163300 Sobic007G161600--Sobic003G008800 Sobic003G046400 Sobic003G046400 Sobic007G161600--Sobic003G046400 Sobic003G177000 Sobic003G177000 Sobic002G425200--Sobic003G177000 Sobic002G425200--Sobic007G159200 Sobic002G425200--Sobic008G038200 Sobic008G088842 Sobic008G088842 Sobic002G425200--Sobic008G088842 Sobic002G425200--Sobic006G280100 Sobic004G199200 Sobic004G199200 Sobic002G425200--Sobic004G199200 Sobic002G425200--Sobic006G067700 Sobic002G425200--Sobic008G080500 Sobic006G112700 Sobic006G112700 Sobic002G425200--Sobic006G112700
Octagon: transcription factors


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