Gene annotation
Transcriptome id Sobic.001G300000.1
Synonym
Functional annotation -
UniProt A0A1B6QLX7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
2 Sobic.001G541000 MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
3 Sobic.007G209600 ENT domain containing protein, expressed -
4 Sobic.007G159200 PWWP domain containing protein, expressed -
5 Sobic.007G184100 expressed protein -
6 Sobic.008G080500 expressed protein -
7 Sobic.006G280100 SET domain containing protein, expressed -
8 Sobic.003G135500 sugar transporter superfamily, putative, expressed -
9 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1
10 Sobic.004G038100 expressed protein K14303: NUP160, nuclear pore complex protein Nup160
11 Sobic.003G431600 expressed protein -
12 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
13 Sobic.008G045000 expressed protein -
14 Sobic.001G036300 aminopeptidase, putative, expressed K01254: leukotriene-A4 hydrolase
15 Sobic.003G360300 exostosin family domain containing protein, expressed -
16 Sobic.010G250800 DNA binding protein, putative, expressed -
17 Sobic.002G219900 Spc97 / Spc98 family protein, putative, expressed K16570: TUBGCP3, gamma-tubulin complex component 3
18 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
19 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
20 Sobic.002G184400 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor


Gene co-expression network
sample Sobic001G300000 Sobic001G300000 Sobic003G177000 Sobic003G177000 Sobic001G300000--Sobic003G177000 Sobic001G541000 Sobic001G541000 Sobic001G300000--Sobic001G541000 Sobic007G209600 Sobic007G209600 Sobic001G300000--Sobic007G209600 Sobic007G159200 Sobic007G159200 Sobic001G300000--Sobic007G159200 Sobic007G184100 Sobic007G184100 Sobic001G300000--Sobic007G184100 Sobic008G080500 Sobic008G080500 Sobic001G300000--Sobic008G080500 Sobic006G280100 Sobic006G280100 Sobic001G300000--Sobic006G280100 Sobic003G135500 Sobic003G135500 Sobic001G300000--Sobic003G135500 Sobic001G211500 Sobic001G211500 Sobic001G300000--Sobic001G211500 Sobic002G425200 Sobic002G425200 Sobic003G177000--Sobic002G425200 Sobic008G038200 Sobic008G038200 Sobic003G177000--Sobic008G038200 Sobic003G177000--Sobic001G300000 Sobic003G177000--Sobic001G541000 Sobic007G161600 Sobic007G161600 Sobic003G177000--Sobic007G161600 Sobic003G177000--Sobic006G280100 Sobic001G523700 Sobic001G523700 Sobic003G177000--Sobic001G523700 Sobic003G177000--Sobic007G159200 Sobic008G045000 Sobic008G045000 Sobic003G177000--Sobic008G045000 Sobic001G036300 Sobic001G036300 Sobic001G541000--Sobic001G036300 Sobic001G541000--Sobic003G177000 Sobic001G541000--Sobic001G300000 Sobic009G101000 Sobic009G101000 Sobic001G541000--Sobic009G101000 Sobic001G541000--Sobic007G184100 Sobic001G541000--Sobic006G280100 Sobic003G431600 Sobic003G431600 Sobic001G541000--Sobic003G431600 Sobic001G541000--Sobic003G135500 Sobic010G153300 Sobic010G153300 Sobic001G541000--Sobic010G153300 Sobic007G209600--Sobic001G211500 Sobic004G287100 Sobic004G287100 Sobic007G209600--Sobic004G287100 Sobic002G219900 Sobic002G219900 Sobic007G209600--Sobic002G219900 Sobic003G212600 Sobic003G212600 Sobic007G209600--Sobic003G212600 Sobic007G209600--Sobic001G300000 Sobic003G311500 Sobic003G311500 Sobic007G209600--Sobic003G311500 Sobic001G210000 Sobic001G210000 Sobic007G209600--Sobic001G210000 Sobic004G343200 Sobic004G343200 Sobic007G209600--Sobic004G343200 Sobic004G352100 Sobic004G352100 Sobic007G209600--Sobic004G352100 Sobic007G159200--Sobic008G080500 Sobic001G248100 Sobic001G248100 Sobic007G159200--Sobic001G248100 Sobic007G159200--Sobic006G280100 Sobic010G051400 Sobic010G051400 Sobic007G159200--Sobic010G051400 Sobic004G355800 Sobic004G355800 Sobic007G159200--Sobic004G355800 Sobic007G159200--Sobic002G425200 Sobic010G262100 Sobic010G262100 Sobic007G159200--Sobic010G262100 Sobic007G159200--Sobic001G300000 Sobic009G007700 Sobic009G007700 Sobic007G159200--Sobic009G007700 Sobic001G025900 Sobic001G025900 Sobic007G184100--Sobic001G025900 Sobic003G393100 Sobic003G393100 Sobic007G184100--Sobic003G393100 Sobic004G307900 Sobic004G307900 Sobic007G184100--Sobic004G307900 Sobic007G184100--Sobic001G300000 Sobic001G377700 Sobic001G377700 Sobic007G184100--Sobic001G377700 Sobic001G013400 Sobic001G013400 Sobic007G184100--Sobic001G013400 Sobic005G104300 Sobic005G104300 Sobic007G184100--Sobic005G104300 Sobic007G007800 Sobic007G007800 Sobic007G184100--Sobic007G007800 Sobic002G317700 Sobic002G317700 Sobic007G184100--Sobic002G317700 Sobic008G080500--Sobic007G159200 Sobic008G080500--Sobic010G262100 Sobic008G080500--Sobic004G355800 Sobic006G112700 Sobic006G112700 Sobic008G080500--Sobic006G112700 Sobic002G079100 Sobic002G079100 Sobic008G080500--Sobic002G079100 Sobic005G200900 Sobic005G200900 Sobic008G080500--Sobic005G200900 Sobic010G269300 Sobic010G269300 Sobic008G080500--Sobic010G269300 Sobic003G299500 Sobic003G299500 Sobic008G080500--Sobic003G299500 Sobic002G235900 Sobic002G235900 Sobic008G080500--Sobic002G235900 Sobic009G190200 Sobic009G190200 Sobic006G280100--Sobic009G190200 Sobic006G280100--Sobic002G219900 Sobic004G043750 Sobic004G043750 Sobic006G280100--Sobic004G043750 Sobic004G038100 Sobic004G038100 Sobic006G280100--Sobic004G038100 Sobic006G280100--Sobic007G159200 Sobic006G280100--Sobic003G135500 Sobic007G125700 Sobic007G125700 Sobic006G280100--Sobic007G125700 Sobic006G280100--Sobic002G079100 Sobic006G280100--Sobic008G080500 Sobic003G135500--Sobic006G280100 Sobic003G135500--Sobic003G431600 Sobic003G135500--Sobic003G299500 Sobic006G181800 Sobic006G181800 Sobic003G135500--Sobic006G181800 Sobic009G120400 Sobic009G120400 Sobic003G135500--Sobic009G120400 Sobic003G360300 Sobic003G360300 Sobic003G135500--Sobic003G360300 Sobic003G135500--Sobic008G080500 Sobic008G092800 Sobic008G092800 Sobic003G135500--Sobic008G092800 Sobic003G135500--Sobic002G079100 Sobic006G106200 Sobic006G106200 Sobic001G211500--Sobic006G106200 Sobic001G211500--Sobic007G209600 Sobic007G031300 Sobic007G031300 Sobic001G211500--Sobic007G031300 Sobic009G052100 Sobic009G052100 Sobic001G211500--Sobic009G052100 Sobic003G411700 Sobic003G411700 Sobic001G211500--Sobic003G411700 Sobic008G169400 Sobic008G169400 Sobic001G211500--Sobic008G169400 Sobic007G076200 Sobic007G076200 Sobic001G211500--Sobic007G076200 Sobic002G271400 Sobic002G271400 Sobic001G211500--Sobic002G271400 Sobic010G024000 Sobic010G024000 Sobic001G211500--Sobic010G024000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.