Gene annotation
Transcriptome id Sobic.001G036300.1
Synonym Sb01g003380
Functional annotation aminopeptidase, putative, expressed
UniProt C5WV27
Pfam PF09127 PF01433
Panther DB PTHR11533
NCBI CDD -
KEGG Orthology K01254; leukotriene-A4 hydrolase
Gene Ontology GO:0008270; zinc ion binding GO:0008237metallopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G13520 : peptidase M1 family protein
RAP-DB (Rice) LOC_Os03g60460.1 : aminopeptidase, putative, expressed
MaizeGDB (Corn) Zm00025a008789 , Zm00025a021311
Brachypodium KQK12457
Barley HORVU5Hr1G112530.3 , HORVU5Hr1G112530.2 , HORVU5Hr1G112530.1 , HORVU0Hr1G014070.1
Wheat TraesCS5B02G487400 , TraesCS5A02G474300 , TraesCS5D02G487100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G541000 MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
2 Sobic.009G256700 - -
3 Sobic.001G300000 - -
4 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
5 Sobic.001G144600 parafibromin, putative, expressed K15175: parafibromin
6 Sobic.002G152900 OsTOP6B - Topoisomerase 6 subunit B, expressed -
7 Sobic.002G425200 expressed protein -
8 Sobic.003G115400 RPA3 - Putative single-stranded DNA binding complex subunit 3, expressed K10740: replication factor A3
9 Sobic.010G161525 - -
10 Sobic.001G502600 tetratricopeptide repeat containing protein, putative, expressed -
11 Sobic.007G114000 histone deacetylase, putative, expressed K06067: histone deacetylase 1/2
12 Sobic.009G101000 - -
13 Sobic.008G051100 RNA polymerase II subunit A C-terminal domain phosphatase ssu72, putative, expressed K15544: RNA polymerase II subunit A C-terminal domain phosphatase SSU72
14 Sobic.004G007700 pentatricopeptide, putative, expressed -
15 Sobic.006G280100 SET domain containing protein, expressed -
16 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
17 Sobic.003G250900 AAA-type ATPase family protein, putative, expressed -
18 Sobic.002G184400 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
19 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
20 Sobic.008G008300 expressed protein -


Gene co-expression network
sample Sobic001G036300 Sobic001G036300 Sobic001G541000 Sobic001G541000 Sobic001G036300--Sobic001G541000 Sobic009G256700 Sobic009G256700 Sobic001G036300--Sobic009G256700 Sobic001G300000 Sobic001G300000 Sobic001G036300--Sobic001G300000 Sobic003G177000 Sobic003G177000 Sobic001G036300--Sobic003G177000 Sobic001G144600 Sobic001G144600 Sobic001G036300--Sobic001G144600 Sobic002G152900 Sobic002G152900 Sobic001G036300--Sobic002G152900 Sobic002G425200 Sobic002G425200 Sobic001G036300--Sobic002G425200 Sobic003G115400 Sobic003G115400 Sobic001G036300--Sobic003G115400 Sobic010G161525 Sobic010G161525 Sobic001G036300--Sobic010G161525 Sobic001G541000--Sobic001G036300 Sobic001G541000--Sobic003G177000 Sobic001G541000--Sobic001G300000 Sobic009G101000 Sobic009G101000 Sobic001G541000--Sobic009G101000 Sobic007G184100 Sobic007G184100 Sobic001G541000--Sobic007G184100 Sobic006G280100 Sobic006G280100 Sobic001G541000--Sobic006G280100 Sobic003G431600 Sobic003G431600 Sobic001G541000--Sobic003G431600 Sobic003G135500 Sobic003G135500 Sobic001G541000--Sobic003G135500 Sobic010G153300 Sobic010G153300 Sobic001G541000--Sobic010G153300 Sobic007G173000 Sobic007G173000 Sobic009G256700--Sobic007G173000 Sobic009G256700--Sobic001G036300 Sobic002G370400 Sobic002G370400 Sobic009G256700--Sobic002G370400 Sobic001G361200 Sobic001G361200 Sobic009G256700--Sobic001G361200 Sobic008G148000 Sobic008G148000 Sobic009G256700--Sobic008G148000 Sobic010G008900 Sobic010G008900 Sobic009G256700--Sobic010G008900 Sobic004G328300 Sobic004G328300 Sobic009G256700--Sobic004G328300 Sobic004G063600 Sobic004G063600 Sobic009G256700--Sobic004G063600 Sobic002G320600 Sobic002G320600 Sobic009G256700--Sobic002G320600 Sobic001G300000--Sobic003G177000 Sobic001G300000--Sobic001G541000 Sobic007G209600 Sobic007G209600 Sobic001G300000--Sobic007G209600 Sobic007G159200 Sobic007G159200 Sobic001G300000--Sobic007G159200 Sobic001G300000--Sobic007G184100 Sobic008G080500 Sobic008G080500 Sobic001G300000--Sobic008G080500 Sobic001G300000--Sobic006G280100 Sobic001G300000--Sobic003G135500 Sobic001G211500 Sobic001G211500 Sobic001G300000--Sobic001G211500 Sobic003G177000--Sobic002G425200 Sobic008G038200 Sobic008G038200 Sobic003G177000--Sobic008G038200 Sobic003G177000--Sobic001G300000 Sobic003G177000--Sobic001G541000 Sobic007G161600 Sobic007G161600 Sobic003G177000--Sobic007G161600 Sobic003G177000--Sobic006G280100 Sobic001G523700 Sobic001G523700 Sobic003G177000--Sobic001G523700 Sobic003G177000--Sobic007G159200 Sobic008G045000 Sobic008G045000 Sobic003G177000--Sobic008G045000 Sobic003G368800 Sobic003G368800 Sobic001G144600--Sobic003G368800 Sobic006G087400 Sobic006G087400 Sobic001G144600--Sobic006G087400 Sobic001G008800 Sobic001G008800 Sobic001G144600--Sobic001G008800 Sobic001G144600--Sobic001G036300 Sobic003G058900 Sobic003G058900 Sobic001G144600--Sobic003G058900 Sobic010G085200 Sobic010G085200 Sobic001G144600--Sobic010G085200 Sobic009G056300 Sobic009G056300 Sobic001G144600--Sobic009G056300 Sobic001G276200 Sobic001G276200 Sobic001G144600--Sobic001G276200 Sobic002G131300 Sobic002G131300 Sobic001G144600--Sobic002G131300 Sobic004G038100 Sobic004G038100 Sobic002G152900--Sobic004G038100 Sobic002G214700 Sobic002G214700 Sobic002G152900--Sobic002G214700 Sobic010G250800 Sobic010G250800 Sobic002G152900--Sobic010G250800 Sobic007G114000 Sobic007G114000 Sobic002G152900--Sobic007G114000 Sobic001G368100 Sobic001G368100 Sobic002G152900--Sobic001G368100 Sobic004G215900 Sobic004G215900 Sobic002G152900--Sobic004G215900 Sobic002G056400 Sobic002G056400 Sobic002G152900--Sobic002G056400 Sobic003G250900 Sobic003G250900 Sobic002G152900--Sobic003G250900 Sobic006G181800 Sobic006G181800 Sobic002G152900--Sobic006G181800 Sobic002G425200--Sobic003G177000 Sobic002G425200--Sobic007G159200 Sobic002G425200--Sobic008G038200 Sobic008G088842 Sobic008G088842 Sobic002G425200--Sobic008G088842 Sobic002G425200--Sobic006G280100 Sobic004G199200 Sobic004G199200 Sobic002G425200--Sobic004G199200 Sobic006G067700 Sobic006G067700 Sobic002G425200--Sobic006G067700 Sobic002G425200--Sobic008G080500 Sobic006G112700 Sobic006G112700 Sobic002G425200--Sobic006G112700 Sobic003G115400--Sobic001G541000 Sobic003G115400--Sobic001G036300 Sobic003G115400--Sobic001G300000 Sobic009G097900 Sobic009G097900 Sobic003G115400--Sobic009G097900 Sobic003G115400--Sobic007G184100 Sobic005G098900 Sobic005G098900 Sobic003G115400--Sobic005G098900 Sobic003G134700 Sobic003G134700 Sobic003G115400--Sobic003G134700 Sobic001G025900 Sobic001G025900 Sobic003G115400--Sobic001G025900 Sobic003G274400 Sobic003G274400 Sobic003G115400--Sobic003G274400 Sobic005G098000 Sobic005G098000 Sobic010G161525--Sobic005G098000 Sobic010G134100 Sobic010G134100 Sobic010G161525--Sobic010G134100 Sobic003G235700 Sobic003G235700 Sobic010G161525--Sobic003G235700 Sobic010G161525--Sobic007G114000 Sobic004G212100 Sobic004G212100 Sobic010G161525--Sobic004G212100 Sobic001G167500 Sobic001G167500 Sobic010G161525--Sobic001G167500 Sobic002G367800 Sobic002G367800 Sobic010G161525--Sobic002G367800 Sobic007G188600 Sobic007G188600 Sobic010G161525--Sobic007G188600 Sobic002G071100 Sobic002G071100 Sobic010G161525--Sobic002G071100
Octagon: transcription factors


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