Gene annotation
Transcriptome id Sobic.009G101000.1
Synonym
Functional annotation -
UniProt A0A1B6P7Y7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G541000 MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
2 Sobic.006G280100 SET domain containing protein, expressed -
3 Sobic.006G008300 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
4 Sobic.001G482200 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
5 Sobic.002G043000 HEN1, putative, expressed -
6 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
7 Sobic.009G190200 transcription elongation factor SPT5 homolog 1, putative, expressed -
8 Sobic.001G300000 - -
9 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
10 Sobic.009G120400 methyltransferase, putative, expressed -
11 Sobic.009G031500 agenet domain containing protein, putative, expressed -
12 Sobic.001G200200 tetratricopeptide repeat, putative, expressed -
13 Sobic.002G219900 Spc97 / Spc98 family protein, putative, expressed K16570: TUBGCP3, gamma-tubulin complex component 3
14 Sobic.003G104100 expressed protein -
15 Sobic.010G097500 DNA polymerase lambda, putative, expressed K03512: DNA polymerase lambda
16 Sobic.009G107080 - -
17 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
18 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
19 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
20 Sobic.003G299500 expressed protein -


Gene co-expression network
sample Sobic009G101000 Sobic009G101000 Sobic001G541000 Sobic001G541000 Sobic009G101000--Sobic001G541000 Sobic006G280100 Sobic006G280100 Sobic009G101000--Sobic006G280100 Sobic006G008300 Sobic006G008300 Sobic009G101000--Sobic006G008300 Sobic001G482200 Sobic001G482200 Sobic009G101000--Sobic001G482200 Sobic002G043000 Sobic002G043000 Sobic009G101000--Sobic002G043000 Sobic002G079100 Sobic002G079100 Sobic009G101000--Sobic002G079100 Sobic009G190200 Sobic009G190200 Sobic009G101000--Sobic009G190200 Sobic001G300000 Sobic001G300000 Sobic009G101000--Sobic001G300000 Sobic003G177000 Sobic003G177000 Sobic009G101000--Sobic003G177000 Sobic001G036300 Sobic001G036300 Sobic001G541000--Sobic001G036300 Sobic001G541000--Sobic003G177000 Sobic001G541000--Sobic001G300000 Sobic001G541000--Sobic009G101000 Sobic007G184100 Sobic007G184100 Sobic001G541000--Sobic007G184100 Sobic001G541000--Sobic006G280100 Sobic003G431600 Sobic003G431600 Sobic001G541000--Sobic003G431600 Sobic003G135500 Sobic003G135500 Sobic001G541000--Sobic003G135500 Sobic010G153300 Sobic010G153300 Sobic001G541000--Sobic010G153300 Sobic006G280100--Sobic009G190200 Sobic002G219900 Sobic002G219900 Sobic006G280100--Sobic002G219900 Sobic004G043750 Sobic004G043750 Sobic006G280100--Sobic004G043750 Sobic004G038100 Sobic004G038100 Sobic006G280100--Sobic004G038100 Sobic007G159200 Sobic007G159200 Sobic006G280100--Sobic007G159200 Sobic006G280100--Sobic003G135500 Sobic007G125700 Sobic007G125700 Sobic006G280100--Sobic007G125700 Sobic006G280100--Sobic002G079100 Sobic008G080500 Sobic008G080500 Sobic006G280100--Sobic008G080500 Sobic001G395200 Sobic001G395200 Sobic006G008300--Sobic001G395200 Sobic010G143600 Sobic010G143600 Sobic006G008300--Sobic010G143600 Sobic003G104100 Sobic003G104100 Sobic006G008300--Sobic003G104100 Sobic003G153900 Sobic003G153900 Sobic006G008300--Sobic003G153900 Sobic009G216500 Sobic009G216500 Sobic006G008300--Sobic009G216500 Sobic003G411700 Sobic003G411700 Sobic006G008300--Sobic003G411700 Sobic009G105400 Sobic009G105400 Sobic006G008300--Sobic009G105400 Sobic003G129500 Sobic003G129500 Sobic006G008300--Sobic003G129500 Sobic009G207400 Sobic009G207400 Sobic006G008300--Sobic009G207400 Sobic001G482200--Sobic002G079100 Sobic002G148400 Sobic002G148400 Sobic001G482200--Sobic002G148400 Sobic001G482200--Sobic006G280100 Sobic009G107080 Sobic009G107080 Sobic001G482200--Sobic009G107080 Sobic002G380100 Sobic002G380100 Sobic001G482200--Sobic002G380100 Sobic003G124600 Sobic003G124600 Sobic001G482200--Sobic003G124600 Sobic001G482200--Sobic008G080500 Sobic010G138900 Sobic010G138900 Sobic001G482200--Sobic010G138900 Sobic008G088842 Sobic008G088842 Sobic001G482200--Sobic008G088842 Sobic008G111600 Sobic008G111600 Sobic002G043000--Sobic008G111600 Sobic004G215900 Sobic004G215900 Sobic002G043000--Sobic004G215900 Sobic002G426100 Sobic002G426100 Sobic002G043000--Sobic002G426100 Sobic006G236000 Sobic006G236000 Sobic002G043000--Sobic006G236000 Sobic008G068100 Sobic008G068100 Sobic002G043000--Sobic008G068100 Sobic006G181800 Sobic006G181800 Sobic002G043000--Sobic006G181800 Sobic002G043000--Sobic004G038100 Sobic002G043000--Sobic006G280100 Sobic004G129500 Sobic004G129500 Sobic002G043000--Sobic004G129500 Sobic002G079100--Sobic003G124600 Sobic001G448100 Sobic001G448100 Sobic002G079100--Sobic001G448100 Sobic008G017100 Sobic008G017100 Sobic002G079100--Sobic008G017100 Sobic002G079100--Sobic008G080500 Sobic002G079100--Sobic002G380100 Sobic002G292800 Sobic002G292800 Sobic002G079100--Sobic002G292800 Sobic010G278600 Sobic010G278600 Sobic002G079100--Sobic010G278600 Sobic006G245900 Sobic006G245900 Sobic002G079100--Sobic006G245900 Sobic002G079100--Sobic001G482200 Sobic009G190200--Sobic004G043750 Sobic009G190200--Sobic006G280100 Sobic002G263700 Sobic002G263700 Sobic009G190200--Sobic002G263700 Sobic007G034200 Sobic007G034200 Sobic009G190200--Sobic007G034200 Sobic008G017900 Sobic008G017900 Sobic009G190200--Sobic008G017900 Sobic009G190200--Sobic007G125700 Sobic009G031500 Sobic009G031500 Sobic009G190200--Sobic009G031500 Sobic009G190200--Sobic004G038100 Sobic003G298900 Sobic003G298900 Sobic009G190200--Sobic003G298900 Sobic001G300000--Sobic003G177000 Sobic001G300000--Sobic001G541000 Sobic007G209600 Sobic007G209600 Sobic001G300000--Sobic007G209600 Sobic001G300000--Sobic007G159200 Sobic001G300000--Sobic007G184100 Sobic001G300000--Sobic008G080500 Sobic001G300000--Sobic006G280100 Sobic001G300000--Sobic003G135500 Sobic001G211500 Sobic001G211500 Sobic001G300000--Sobic001G211500 Sobic002G425200 Sobic002G425200 Sobic003G177000--Sobic002G425200 Sobic008G038200 Sobic008G038200 Sobic003G177000--Sobic008G038200 Sobic003G177000--Sobic001G300000 Sobic003G177000--Sobic001G541000 Sobic007G161600 Sobic007G161600 Sobic003G177000--Sobic007G161600 Sobic003G177000--Sobic006G280100 Sobic001G523700 Sobic001G523700 Sobic003G177000--Sobic001G523700 Sobic003G177000--Sobic007G159200 Sobic008G045000 Sobic008G045000 Sobic003G177000--Sobic008G045000
Octagon: transcription factors


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