Gene annotation
Transcriptome id Sobic.008G008300.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PAR4
Pfam -
Panther DB PTHR31728
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G08780 : -
RAP-DB (Rice) LOC_Os07g35600.2 : expressed protein
MaizeGDB (Corn) Zm00025a028941
Brachypodium KQJ92611
Barley HORVU5Hr1G047470.6 , HORVU5Hr1G047470.5 , HORVU5Hr1G047470.4 , HORVU5Hr1G047470.3
Wheat TraesCS5A02G151000 , TraesCS5D02G156000 , TraesCS5B02G149500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G136500 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
2 Sobic.010G001800 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
3 Sobic.001G132900 expressed protein -
4 Sobic.003G016400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1
6 Sobic.001G099800 nucleic acid binding protein, putative, expressed -
7 Sobic.008G107900 glycine-rich protein, putative, expressed -
8 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
9 Sobic.009G256700 - -
10 Sobic.001G007300 NFD2, putative, expressed -
11 Sobic.009G056300 PHD finger protein, putative, expressed -
12 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
13 Sobic.005G116900 expressed protein -
14 Sobic.003G211100 hyaluronan/mRNA binding family domain containing protein, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
15 Sobic.002G161700 Myb-like DNA-binding domain containing protein, putative, expressed -
16 Sobic.009G188300 universal stress protein domain containing protein, putative, expressed -
17 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
18 Sobic.004G146200 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K16904: dCTP diphosphatase
19 Sobic.010G018000 39S ribosomal protein L47, mitochondrial precursor, putative, expressed K17428: MRPL47, large subunit ribosomal protein L47
20 Sobic.007G108100 co-chaperone protein SBA1, putative, expressed -


Gene co-expression network
sample Sobic008G008300 Sobic008G008300 Sobic001G136500 Sobic001G136500 Sobic008G008300--Sobic001G136500 Sobic010G001800 Sobic010G001800 Sobic008G008300--Sobic010G001800 Sobic001G132900 Sobic001G132900 Sobic008G008300--Sobic001G132900 Sobic003G016400 Sobic003G016400 Sobic008G008300--Sobic003G016400 Sobic004G206300 Sobic004G206300 Sobic008G008300--Sobic004G206300 Sobic001G099800 Sobic001G099800 Sobic008G008300--Sobic001G099800 Sobic008G107900 Sobic008G107900 Sobic008G008300--Sobic008G107900 Sobic008G125000 Sobic008G125000 Sobic008G008300--Sobic008G125000 Sobic009G256700 Sobic009G256700 Sobic008G008300--Sobic009G256700 Sobic001G136500--Sobic001G132900 Sobic001G136500--Sobic001G099800 Sobic009G056300 Sobic009G056300 Sobic001G136500--Sobic009G056300 Sobic001G136500--Sobic008G008300 Sobic010G079800 Sobic010G079800 Sobic001G136500--Sobic010G079800 Sobic006G276200 Sobic006G276200 Sobic001G136500--Sobic006G276200 Sobic004G146200 Sobic004G146200 Sobic001G136500--Sobic004G146200 Sobic001G136500--Sobic008G125000 Sobic001G136500--Sobic004G206300 Sobic001G440900 Sobic001G440900 Sobic010G001800--Sobic001G440900 Sobic007G108100 Sobic007G108100 Sobic010G001800--Sobic007G108100 Sobic002G241500 Sobic002G241500 Sobic010G001800--Sobic002G241500 Sobic010G159100 Sobic010G159100 Sobic010G001800--Sobic010G159100 Sobic001G505000 Sobic001G505000 Sobic010G001800--Sobic001G505000 Sobic010G001800--Sobic008G008300 Sobic008G093200 Sobic008G093200 Sobic010G001800--Sobic008G093200 Sobic001G108400 Sobic001G108400 Sobic010G001800--Sobic001G108400 Sobic009G001200 Sobic009G001200 Sobic010G001800--Sobic009G001200 Sobic003G003000 Sobic003G003000 Sobic001G132900--Sobic003G003000 Sobic001G008800 Sobic001G008800 Sobic001G132900--Sobic001G008800 Sobic009G209100 Sobic009G209100 Sobic001G132900--Sobic009G209100 Sobic001G129400 Sobic001G129400 Sobic001G132900--Sobic001G129400 Sobic001G404100 Sobic001G404100 Sobic001G132900--Sobic001G404100 Sobic010G018000 Sobic010G018000 Sobic001G132900--Sobic010G018000 Sobic001G132900--Sobic001G136500 Sobic009G130400 Sobic009G130400 Sobic001G132900--Sobic009G130400 Sobic004G117800 Sobic004G117800 Sobic001G132900--Sobic004G117800 Sobic003G016400--Sobic003G003000 Sobic003G016400--Sobic008G008300 Sobic003G016400--Sobic001G132900 Sobic003G016400--Sobic001G136500 Sobic006G181700 Sobic006G181700 Sobic003G016400--Sobic006G181700 Sobic003G016400--Sobic010G079800 Sobic004G275100 Sobic004G275100 Sobic003G016400--Sobic004G275100 Sobic003G016400--Sobic008G107900 Sobic003G016400--Sobic006G276200 Sobic004G212700 Sobic004G212700 Sobic004G206300--Sobic004G212700 Sobic004G027000 Sobic004G027000 Sobic004G206300--Sobic004G027000 Sobic004G206300--Sobic009G056300 Sobic004G129600 Sobic004G129600 Sobic004G206300--Sobic004G129600 Sobic009G031500 Sobic009G031500 Sobic004G206300--Sobic009G031500 Sobic004G206300--Sobic008G125000 Sobic004G225300 Sobic004G225300 Sobic004G206300--Sobic004G225300 Sobic001G335500 Sobic001G335500 Sobic004G206300--Sobic001G335500 Sobic004G206300--Sobic001G099800 Sobic003G058900 Sobic003G058900 Sobic001G099800--Sobic003G058900 Sobic001G099800--Sobic001G136500 Sobic001G099800--Sobic001G132900 Sobic001G280400 Sobic001G280400 Sobic001G099800--Sobic001G280400 Sobic001G099800--Sobic004G206300 Sobic001G099800--Sobic008G008300 Sobic001G099800--Sobic008G125000 Sobic001G099800--Sobic004G117800 Sobic008G051100 Sobic008G051100 Sobic001G099800--Sobic008G051100 Sobic001G473400 Sobic001G473400 Sobic008G107900--Sobic001G473400 Sobic005G110526 Sobic005G110526 Sobic008G107900--Sobic005G110526 Sobic010G258000 Sobic010G258000 Sobic008G107900--Sobic010G258000 Sobic004G184000 Sobic004G184000 Sobic008G107900--Sobic004G184000 Sobic009G016500 Sobic009G016500 Sobic008G107900--Sobic009G016500 Sobic007G031100 Sobic007G031100 Sobic008G107900--Sobic007G031100 Sobic003G410200 Sobic003G410200 Sobic008G107900--Sobic003G410200 Sobic008G107900--Sobic008G008300 Sobic001G188700 Sobic001G188700 Sobic008G107900--Sobic001G188700 Sobic008G125000--Sobic009G056300 Sobic001G115500 Sobic001G115500 Sobic008G125000--Sobic001G115500 Sobic006G245700 Sobic006G245700 Sobic008G125000--Sobic006G245700 Sobic003G307900 Sobic003G307900 Sobic008G125000--Sobic003G307900 Sobic004G075200 Sobic004G075200 Sobic008G125000--Sobic004G075200 Sobic009G120500 Sobic009G120500 Sobic008G125000--Sobic009G120500 Sobic007G010900 Sobic007G010900 Sobic008G125000--Sobic007G010900 Sobic006G041100 Sobic006G041100 Sobic008G125000--Sobic006G041100 Sobic004G358900 Sobic004G358900 Sobic008G125000--Sobic004G358900 Sobic007G173000 Sobic007G173000 Sobic009G256700--Sobic007G173000 Sobic001G036300 Sobic001G036300 Sobic009G256700--Sobic001G036300 Sobic002G370400 Sobic002G370400 Sobic009G256700--Sobic002G370400 Sobic001G361200 Sobic001G361200 Sobic009G256700--Sobic001G361200 Sobic008G148000 Sobic008G148000 Sobic009G256700--Sobic008G148000 Sobic010G008900 Sobic010G008900 Sobic009G256700--Sobic010G008900 Sobic004G328300 Sobic004G328300 Sobic009G256700--Sobic004G328300 Sobic004G063600 Sobic004G063600 Sobic009G256700--Sobic004G063600 Sobic002G320600 Sobic002G320600 Sobic009G256700--Sobic002G320600
Octagon: transcription factors


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