Gene annotation
Transcriptome id Sobic.008G107900.1
Synonym
Functional annotation glycine-rich protein, putative, expressed
UniProt A0A1B6PCX9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g32284.1 : glycine-rich protein, putative, expressed
MaizeGDB (Corn) Zm00025a025581
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G107900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
2 Sobic.005G110526 - -
3 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
4 Sobic.004G184000 SFT2, putative, expressed -
5 Sobic.009G016500 expressed protein -
6 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
7 Sobic.003G410200 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed K04649: HIP2, ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
8 Sobic.008G008300 expressed protein -
9 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
10 Sobic.001G129400 ribosomal protein-related, putative, expressed K02970: RP-S21, MRPS21, small subunit ribosomal protein S21
11 Sobic.010G194200 expressed protein -
12 Sobic.006G162600 expressed protein -
13 Sobic.004G356300 expressed protein -
14 Sobic.003G016400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G145900 expressed protein -
16 Sobic.004G007700 pentatricopeptide, putative, expressed -
17 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
18 Sobic.002G422400 adenylate cyclase family protein, expressed -
19 Sobic.005G132700 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
20 Sobic.003G248300 kinase, pfkB family, putative, expressed K00852: rbsK, ribokinase


Gene co-expression network
sample Sobic008G107900 Sobic008G107900 Sobic001G473400 Sobic001G473400 Sobic008G107900--Sobic001G473400 Sobic005G110526 Sobic005G110526 Sobic008G107900--Sobic005G110526 Sobic010G258000 Sobic010G258000 Sobic008G107900--Sobic010G258000 Sobic004G184000 Sobic004G184000 Sobic008G107900--Sobic004G184000 Sobic009G016500 Sobic009G016500 Sobic008G107900--Sobic009G016500 Sobic007G031100 Sobic007G031100 Sobic008G107900--Sobic007G031100 Sobic003G410200 Sobic003G410200 Sobic008G107900--Sobic003G410200 Sobic008G008300 Sobic008G008300 Sobic008G107900--Sobic008G008300 Sobic001G188700 Sobic001G188700 Sobic008G107900--Sobic001G188700 Sobic001G473400--Sobic010G258000 Sobic003G170300 Sobic003G170300 Sobic001G473400--Sobic003G170300 Sobic001G473400--Sobic009G016500 Sobic009G240700 Sobic009G240700 Sobic001G473400--Sobic009G240700 Sobic003G388700 Sobic003G388700 Sobic001G473400--Sobic003G388700 Sobic006G020900 Sobic006G020900 Sobic001G473400--Sobic006G020900 Sobic001G282500 Sobic001G282500 Sobic001G473400--Sobic001G282500 Sobic002G395000 Sobic002G395000 Sobic001G473400--Sobic002G395000 Sobic002G308300 Sobic002G308300 Sobic001G473400--Sobic002G308300 Sobic005G110526--Sobic001G188700 Sobic001G110300 Sobic001G110300 Sobic005G110526--Sobic001G110300 Sobic001G434400 Sobic001G434400 Sobic005G110526--Sobic001G434400 Sobic005G110526--Sobic008G107900 Sobic001G129400 Sobic001G129400 Sobic005G110526--Sobic001G129400 Sobic010G194200 Sobic010G194200 Sobic005G110526--Sobic010G194200 Sobic003G248300 Sobic003G248300 Sobic005G110526--Sobic003G248300 Sobic004G356300 Sobic004G356300 Sobic005G110526--Sobic004G356300 Sobic005G110526--Sobic004G184000 Sobic010G258000--Sobic001G473400 Sobic006G203900 Sobic006G203900 Sobic010G258000--Sobic006G203900 Sobic001G035400 Sobic001G035400 Sobic010G258000--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic010G258000--Sobic001G073600 Sobic010G258000--Sobic003G388700 Sobic010G258000--Sobic009G016500 Sobic010G258000--Sobic003G170300 Sobic008G136800 Sobic008G136800 Sobic010G258000--Sobic008G136800 Sobic007G119600 Sobic007G119600 Sobic010G258000--Sobic007G119600 Sobic007G165300 Sobic007G165300 Sobic004G184000--Sobic007G165300 Sobic005G129201 Sobic005G129201 Sobic004G184000--Sobic005G129201 Sobic003G326900 Sobic003G326900 Sobic004G184000--Sobic003G326900 Sobic004G184000--Sobic010G258000 Sobic001G451901 Sobic001G451901 Sobic004G184000--Sobic001G451901 Sobic003G348200 Sobic003G348200 Sobic004G184000--Sobic003G348200 Sobic007G217400 Sobic007G217400 Sobic004G184000--Sobic007G217400 Sobic004G184000--Sobic001G110300 Sobic001G116000 Sobic001G116000 Sobic004G184000--Sobic001G116000 Sobic001G347901 Sobic001G347901 Sobic009G016500--Sobic001G347901 Sobic009G016500--Sobic002G308300 Sobic001G286200 Sobic001G286200 Sobic009G016500--Sobic001G286200 Sobic009G016500--Sobic001G473400 Sobic001G370700 Sobic001G370700 Sobic009G016500--Sobic001G370700 Sobic010G264300 Sobic010G264300 Sobic009G016500--Sobic010G264300 Sobic009G016500--Sobic010G258000 Sobic002G078300 Sobic002G078300 Sobic009G016500--Sobic002G078300 Sobic009G016500--Sobic008G136800 Sobic007G010200 Sobic007G010200 Sobic007G031100--Sobic007G010200 Sobic001G432100 Sobic001G432100 Sobic007G031100--Sobic001G432100 Sobic002G280900 Sobic002G280900 Sobic007G031100--Sobic002G280900 Sobic007G031100--Sobic003G410200 Sobic003G085500 Sobic003G085500 Sobic007G031100--Sobic003G085500 Sobic007G031100--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic007G031100--Sobic002G422400 Sobic006G245700 Sobic006G245700 Sobic007G031100--Sobic006G245700 Sobic009G232500 Sobic009G232500 Sobic007G031100--Sobic009G232500 Sobic003G410200--Sobic009G232500 Sobic003G435000 Sobic003G435000 Sobic003G410200--Sobic003G435000 Sobic009G131500 Sobic009G131500 Sobic003G410200--Sobic009G131500 Sobic003G410200--Sobic007G031100 Sobic004G012800 Sobic004G012800 Sobic003G410200--Sobic004G012800 Sobic002G374200 Sobic002G374200 Sobic003G410200--Sobic002G374200 Sobic003G410200--Sobic007G010200 Sobic002G306600 Sobic002G306600 Sobic003G410200--Sobic002G306600 Sobic006G091850 Sobic006G091850 Sobic003G410200--Sobic006G091850 Sobic001G136500 Sobic001G136500 Sobic008G008300--Sobic001G136500 Sobic010G001800 Sobic010G001800 Sobic008G008300--Sobic010G001800 Sobic001G132900 Sobic001G132900 Sobic008G008300--Sobic001G132900 Sobic003G016400 Sobic003G016400 Sobic008G008300--Sobic003G016400 Sobic004G206300 Sobic004G206300 Sobic008G008300--Sobic004G206300 Sobic001G099800 Sobic001G099800 Sobic008G008300--Sobic001G099800 Sobic008G008300--Sobic008G107900 Sobic008G125000 Sobic008G125000 Sobic008G008300--Sobic008G125000 Sobic009G256700 Sobic009G256700 Sobic008G008300--Sobic009G256700 Sobic001G188700--Sobic005G110526 Sobic004G018200 Sobic004G018200 Sobic001G188700--Sobic004G018200 Sobic006G094500 Sobic006G094500 Sobic001G188700--Sobic006G094500 Sobic009G187600 Sobic009G187600 Sobic001G188700--Sobic009G187600 Sobic001G188700--Sobic007G031100 Sobic001G188700--Sobic008G125000 Sobic001G188700--Sobic001G132900 Sobic003G058900 Sobic003G058900 Sobic001G188700--Sobic003G058900 Sobic001G188700--Sobic001G434400
Octagon: transcription factors


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