Gene annotation
Transcriptome id Sobic.006G162600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PMA9
Pfam -
Panther DB PTHR34194 PTHR34194:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G77270 : -
RAP-DB (Rice) LOC_Os04g45610.1 : expressed protein
MaizeGDB (Corn) Zm00025a010402
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G010200 - -
2 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
3 Sobic.004G229000 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
4 Sobic.003G410200 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed K04649: HIP2, ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
5 Sobic.008G107900 glycine-rich protein, putative, expressed -
6 Sobic.001G432100 expressed protein -
7 Sobic.009G232500 expressed protein -
8 Sobic.003G304800 OsRhmbd4 - Putative Rhomboid homologue, expressed -
9 Sobic.003G085500 signal peptidase complex subunit 3, putative, expressed K12948: SPCS3, signal peptidase complex subunit 3
10 Sobic.004G027000 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
11 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
12 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1
13 Sobic.004G354100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
14 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
15 Sobic.001G138900 expressed protein -
16 Sobic.004G184000 SFT2, putative, expressed -
17 Sobic.001G154300 DNA binding protein, putative, expressed -
18 Sobic.003G094600 glycosyltransferase protein, putative, expressed -
19 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
20 Sobic.009G122900 alpha 1,3-xylosyltransferase, putative, expressed K11714: rhamnogalacturonan II specific xylosyltransferase


Gene co-expression network
sample Sobic006G162600 Sobic006G162600 Sobic007G010200 Sobic007G010200 Sobic006G162600--Sobic007G010200 Sobic007G031100 Sobic007G031100 Sobic006G162600--Sobic007G031100 Sobic004G229000 Sobic004G229000 Sobic006G162600--Sobic004G229000 Sobic003G410200 Sobic003G410200 Sobic006G162600--Sobic003G410200 Sobic008G107900 Sobic008G107900 Sobic006G162600--Sobic008G107900 Sobic001G432100 Sobic001G432100 Sobic006G162600--Sobic001G432100 Sobic009G232500 Sobic009G232500 Sobic006G162600--Sobic009G232500 Sobic003G304800 Sobic003G304800 Sobic006G162600--Sobic003G304800 Sobic003G085500 Sobic003G085500 Sobic006G162600--Sobic003G085500 Sobic007G010200--Sobic004G229000 Sobic008G112100 Sobic008G112100 Sobic007G010200--Sobic008G112100 Sobic007G010200--Sobic007G031100 Sobic007G036800 Sobic007G036800 Sobic007G010200--Sobic007G036800 Sobic007G140100 Sobic007G140100 Sobic007G010200--Sobic007G140100 Sobic009G054400 Sobic009G054400 Sobic007G010200--Sobic009G054400 Sobic007G010200--Sobic003G304800 Sobic001G309200 Sobic001G309200 Sobic007G010200--Sobic001G309200 Sobic010G018900 Sobic010G018900 Sobic007G010200--Sobic010G018900 Sobic007G031100--Sobic007G010200 Sobic007G031100--Sobic001G432100 Sobic002G280900 Sobic002G280900 Sobic007G031100--Sobic002G280900 Sobic007G031100--Sobic003G410200 Sobic007G031100--Sobic003G085500 Sobic001G188700 Sobic001G188700 Sobic007G031100--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic007G031100--Sobic002G422400 Sobic006G245700 Sobic006G245700 Sobic007G031100--Sobic006G245700 Sobic007G031100--Sobic009G232500 Sobic004G229000--Sobic007G010200 Sobic004G229000--Sobic007G036800 Sobic004G229000--Sobic003G304800 Sobic004G229000--Sobic001G432100 Sobic003G109200 Sobic003G109200 Sobic004G229000--Sobic003G109200 Sobic008G125000 Sobic008G125000 Sobic004G229000--Sobic008G125000 Sobic004G229000--Sobic007G031100 Sobic004G129500 Sobic004G129500 Sobic004G229000--Sobic004G129500 Sobic004G229000--Sobic001G188700 Sobic003G410200--Sobic009G232500 Sobic003G435000 Sobic003G435000 Sobic003G410200--Sobic003G435000 Sobic009G131500 Sobic009G131500 Sobic003G410200--Sobic009G131500 Sobic003G410200--Sobic007G031100 Sobic004G012800 Sobic004G012800 Sobic003G410200--Sobic004G012800 Sobic002G374200 Sobic002G374200 Sobic003G410200--Sobic002G374200 Sobic003G410200--Sobic007G010200 Sobic002G306600 Sobic002G306600 Sobic003G410200--Sobic002G306600 Sobic006G091850 Sobic006G091850 Sobic003G410200--Sobic006G091850 Sobic001G473400 Sobic001G473400 Sobic008G107900--Sobic001G473400 Sobic005G110526 Sobic005G110526 Sobic008G107900--Sobic005G110526 Sobic010G258000 Sobic010G258000 Sobic008G107900--Sobic010G258000 Sobic004G184000 Sobic004G184000 Sobic008G107900--Sobic004G184000 Sobic009G016500 Sobic009G016500 Sobic008G107900--Sobic009G016500 Sobic008G107900--Sobic007G031100 Sobic008G107900--Sobic003G410200 Sobic008G008300 Sobic008G008300 Sobic008G107900--Sobic008G008300 Sobic008G107900--Sobic001G188700 Sobic009G218000 Sobic009G218000 Sobic001G432100--Sobic009G218000 Sobic001G432100--Sobic007G010200 Sobic001G432100--Sobic007G031100 Sobic001G432100--Sobic007G036800 Sobic004G145600 Sobic004G145600 Sobic001G432100--Sobic004G145600 Sobic001G432100--Sobic002G280900 Sobic001G432100--Sobic010G018900 Sobic001G432100--Sobic004G229000 Sobic004G354100 Sobic004G354100 Sobic001G432100--Sobic004G354100 Sobic009G232500--Sobic003G410200 Sobic001G107300 Sobic001G107300 Sobic009G232500--Sobic001G107300 Sobic009G232500--Sobic003G109200 Sobic009G232500--Sobic002G374200 Sobic006G181700 Sobic006G181700 Sobic009G232500--Sobic006G181700 Sobic001G478700 Sobic001G478700 Sobic009G232500--Sobic001G478700 Sobic009G232500--Sobic007G010200 Sobic001G239100 Sobic001G239100 Sobic009G232500--Sobic001G239100 Sobic009G232500--Sobic007G031100 Sobic009G122900 Sobic009G122900 Sobic003G304800--Sobic009G122900 Sobic003G304800--Sobic007G010200 Sobic001G472100 Sobic001G472100 Sobic003G304800--Sobic001G472100 Sobic003G304800--Sobic008G112100 Sobic003G331000 Sobic003G331000 Sobic003G304800--Sobic003G331000 Sobic003G304800--Sobic007G036800 Sobic009G060400 Sobic009G060400 Sobic003G304800--Sobic009G060400 Sobic005G160200 Sobic005G160200 Sobic003G304800--Sobic005G160200 Sobic001G425200 Sobic001G425200 Sobic003G304800--Sobic001G425200 Sobic001G485300 Sobic001G485300 Sobic003G085500--Sobic001G485300 Sobic001G352800 Sobic001G352800 Sobic003G085500--Sobic001G352800 Sobic010G002800 Sobic010G002800 Sobic003G085500--Sobic010G002800 Sobic003G085500--Sobic004G354100 Sobic007G022700 Sobic007G022700 Sobic003G085500--Sobic007G022700 Sobic002G392400 Sobic002G392400 Sobic003G085500--Sobic002G392400 Sobic002G276800 Sobic002G276800 Sobic003G085500--Sobic002G276800 Sobic003G388700 Sobic003G388700 Sobic003G085500--Sobic003G388700 Sobic004G186100 Sobic004G186100 Sobic003G085500--Sobic004G186100
Octagon: transcription factors


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