Gene annotation
Transcriptome id Sobic.001G154300.5,Sobic.001G154300.4,Sobic.001G154300.6
Synonym
Functional annotation DNA binding protein, putative, expressed
UniProt A0A1B6QJ39
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G52060 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os03g44580.3 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a025149 , Zm00025a017243 , Zm00025a007245
Brachypodium KQJ85741 , KQK13972
Barley HORVU5Hr1G092760.5 , HORVU5Hr1G092760.4 , HORVU5Hr1G092760.7 , HORVU5Hr1G092760.6 , HORVU5Hr1G092760.1 , HORVU5Hr1G092760.3 , HORVU5Hr1G092760.2 , HORVU5Hr1G092760.9 , HORVU5Hr1G092760.8 , HORVU5Hr1G092760.11 , HORVU5Hr1G092760.10
Wheat -
Populus -


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cDNA sequences
Sobic.001G154300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G381500 lung seven transmembrane domain containing protein, putative, expressed -
2 Sobic.004G328300 expressed protein -
3 Sobic.001G361200 expressed protein -
4 Sobic.001G023500 expressed protein -
5 Sobic.002G192900 expressed protein -
6 Sobic.004G306100 expressed protein -
7 Sobic.001G248400 expressed protein -
8 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
9 Sobic.006G127200 kelch repeat protein, putative, expressed -
10 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
11 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
12 Sobic.003G045000 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
13 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
14 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
15 Sobic.009G138300 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
16 Sobic.010G024000 transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
17 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
18 Sobic.006G095000 PPR repeat domain containing protein, putative, expressed -
19 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
20 Sobic.007G111300 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4


Gene co-expression network
sample Sobic001G154300 Sobic001G154300 Sobic001G381500 Sobic001G381500 Sobic001G154300--Sobic001G381500 Sobic004G328300 Sobic004G328300 Sobic001G154300--Sobic004G328300 Sobic001G361200 Sobic001G361200 Sobic001G154300--Sobic001G361200 Sobic001G023500 Sobic001G023500 Sobic001G154300--Sobic001G023500 Sobic002G192900 Sobic002G192900 Sobic001G154300--Sobic002G192900 Sobic004G306100 Sobic004G306100 Sobic001G154300--Sobic004G306100 Sobic001G248400 Sobic001G248400 Sobic001G154300--Sobic001G248400 Sobic002G308000 Sobic002G308000 Sobic001G154300--Sobic002G308000 Sobic006G127200 Sobic006G127200 Sobic001G154300--Sobic006G127200 Sobic001G381500--Sobic001G154300 Sobic001G381500--Sobic002G308000 Sobic001G433600 Sobic001G433600 Sobic001G381500--Sobic001G433600 Sobic007G189100 Sobic007G189100 Sobic001G381500--Sobic007G189100 Sobic002G193500 Sobic002G193500 Sobic001G381500--Sobic002G193500 Sobic009G080600 Sobic009G080600 Sobic001G381500--Sobic009G080600 Sobic010G269800 Sobic010G269800 Sobic001G381500--Sobic010G269800 Sobic002G392400 Sobic002G392400 Sobic001G381500--Sobic002G392400 Sobic001G381500--Sobic004G306100 Sobic005G055600 Sobic005G055600 Sobic004G328300--Sobic005G055600 Sobic006G193100 Sobic006G193100 Sobic004G328300--Sobic006G193100 Sobic003G315700 Sobic003G315700 Sobic004G328300--Sobic003G315700 Sobic004G053900 Sobic004G053900 Sobic004G328300--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic004G328300--Sobic001G025900 Sobic004G328300--Sobic001G023500 Sobic004G328300--Sobic001G154300 Sobic009G202801 Sobic009G202801 Sobic004G328300--Sobic009G202801 Sobic002G113400 Sobic002G113400 Sobic004G328300--Sobic002G113400 Sobic001G361200--Sobic002G192900 Sobic001G361200--Sobic001G154300 Sobic003G184300 Sobic003G184300 Sobic001G361200--Sobic003G184300 Sobic001G361200--Sobic004G328300 Sobic001G296800 Sobic001G296800 Sobic001G361200--Sobic001G296800 Sobic001G361200--Sobic003G315700 Sobic006G095000 Sobic006G095000 Sobic001G361200--Sobic006G095000 Sobic003G411700 Sobic003G411700 Sobic001G361200--Sobic003G411700 Sobic001G361200--Sobic004G306100 Sobic001G023500--Sobic004G328300 Sobic001G023500--Sobic001G154300 Sobic001G201000 Sobic001G201000 Sobic001G023500--Sobic001G201000 Sobic001G023500--Sobic005G055600 Sobic010G231600 Sobic010G231600 Sobic001G023500--Sobic010G231600 Sobic002G320600 Sobic002G320600 Sobic001G023500--Sobic002G320600 Sobic003G045700 Sobic003G045700 Sobic001G023500--Sobic003G045700 Sobic003G031700 Sobic003G031700 Sobic001G023500--Sobic003G031700 Sobic001G285200 Sobic001G285200 Sobic001G023500--Sobic001G285200 Sobic002G192900--Sobic002G308000 Sobic010G188900 Sobic010G188900 Sobic002G192900--Sobic010G188900 Sobic002G192900--Sobic006G095000 Sobic002G192900--Sobic001G361200 Sobic002G390800 Sobic002G390800 Sobic002G192900--Sobic002G390800 Sobic002G192900--Sobic003G184300 Sobic004G064600 Sobic004G064600 Sobic002G192900--Sobic004G064600 Sobic001G323400 Sobic001G323400 Sobic002G192900--Sobic001G323400 Sobic002G192900--Sobic001G248400 Sobic002G271400 Sobic002G271400 Sobic004G306100--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic004G306100--Sobic010G103500 Sobic004G306100--Sobic003G411700 Sobic004G306100--Sobic003G315700 Sobic004G306100--Sobic006G127200 Sobic003G409600 Sobic003G409600 Sobic004G306100--Sobic003G409600 Sobic002G260700 Sobic002G260700 Sobic004G306100--Sobic002G260700 Sobic002G123600 Sobic002G123600 Sobic004G306100--Sobic002G123600 Sobic010G052400 Sobic010G052400 Sobic004G306100--Sobic010G052400 Sobic010G038200 Sobic010G038200 Sobic001G248400--Sobic010G038200 Sobic008G104000 Sobic008G104000 Sobic001G248400--Sobic008G104000 Sobic008G004900 Sobic008G004900 Sobic001G248400--Sobic008G004900 Sobic001G126800 Sobic001G126800 Sobic001G248400--Sobic001G126800 Sobic001G248400--Sobic002G308000 Sobic003G423700 Sobic003G423700 Sobic001G248400--Sobic003G423700 Sobic010G009700 Sobic010G009700 Sobic001G248400--Sobic010G009700 Sobic004G213400 Sobic004G213400 Sobic001G248400--Sobic004G213400 Sobic001G248400--Sobic002G390800 Sobic002G308000--Sobic002G392400 Sobic007G105700 Sobic007G105700 Sobic002G308000--Sobic007G105700 Sobic001G117900 Sobic001G117900 Sobic002G308000--Sobic001G117900 Sobic002G308000--Sobic001G433600 Sobic003G293400 Sobic003G293400 Sobic002G308000--Sobic003G293400 Sobic010G253200 Sobic010G253200 Sobic002G308000--Sobic010G253200 Sobic001G131900 Sobic001G131900 Sobic002G308000--Sobic001G131900 Sobic007G111300 Sobic007G111300 Sobic002G308000--Sobic007G111300 Sobic002G308000--Sobic002G192900 Sobic006G127200--Sobic004G306100 Sobic006G127200--Sobic002G271400 Sobic010G257500 Sobic010G257500 Sobic006G127200--Sobic010G257500 Sobic006G127200--Sobic002G123600 Sobic006G127200--Sobic003G409600 Sobic003G226700 Sobic003G226700 Sobic006G127200--Sobic003G226700 Sobic009G081800 Sobic009G081800 Sobic006G127200--Sobic009G081800 Sobic006G127200--Sobic010G103500 Sobic006G127200--Sobic001G025900
Octagon: transcription factors


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